RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SAP30BPQ9UHR5 308 aaKnown RBP13.59□□□□□ -0.23
SMAD3-202ENST00000439724 EP400Q96L91 3159 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 CAVIN2O95810 425 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 TSPY3P0CV98 308 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 TSPY8P0CW00 308 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 CDK8P49336 464 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 FKBP1AP62942 108 aaKnown RBP13.59□□□□□ -0.23
SMAD3-202ENST00000439724 EN1Q05925 392 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-202ENST00000439724 GRM4Q14833 912 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 SASS6Q6UVJ0 657 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 SRBD1Q8N5C6 995 aaKnown RBP13.59□□□□□ -0.23
SMAD3-202ENST00000439724 SLC44A5Q8NCS7 719 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 CNKSR1Q969H4 720 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 SHISA4Q96DD7 197 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 PHF20Q9BVI0 1012 aa13.59□□□□□ -0.23
SMAD3-202ENST00000439724 ADAMTSL1Q8N6G6 1762 aa13.58□□□□□ -0.24
SMAD3-202ENST00000439724 FAM237AA0A1B0GTK4 181 aa13.58□□□□□ -0.24
SMAD3-202ENST00000439724 WDHD1O75717 1129 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-202ENST00000439724 DOK7Q18PE1 504 aa13.58□□□□□ -0.24
SMAD3-202ENST00000439724 HHIPL2Q6UWX4 724 aa13.58□□□□□ -0.24
SMAD3-202ENST00000439724 PNMA1Q8ND90 353 aa13.58□□□□□ -0.24
SMAD3-202ENST00000439724 NEDD1Q8NHV4 660 aa13.58□□□□□ -0.24
SMAD3-202ENST00000439724 FBXW7Q969H0 707 aa13.58□□□□□ -0.24
SMAD3-202ENST00000439724 TTF2Q9UNY4 1162 aaKnown RBP13.58□□□□□ -0.24
SMAD3-202ENST00000439724 MORC2Q9Y6X9 1032 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-202ENST00000439724 V9GY48 417 aaPredicted RBP13.58□□□□□ -0.24
SMAD3-202ENST00000439724 PLIN4Q96Q06 1357 aa13.57□□□□□ -0.24
SMAD3-202ENST00000439724 A0A1B0GVL5 298 aa13.57□□□□□ -0.24
SMAD3-202ENST00000439724 G3V3G9 751 aa13.57□□□□□ -0.24
SMAD3-202ENST00000439724 CUTAO60888 179 aa13.57□□□□□ -0.24
SMAD3-202ENST00000439724 KRT2P35908 639 aa13.57□□□□□ -0.24
SMAD3-202ENST00000439724 GNAQP50148 359 aa13.57□□□□□ -0.24
SMAD3-202ENST00000439724 TOB1P50616 345 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-202ENST00000439724 NDUFA8P51970 172 aa13.57□□□□□ -0.24
SMAD3-202ENST00000439724 DCAF8Q5TAQ9 597 aa13.57□□□□□ -0.24
SMAD3-202ENST00000439724 CC2D2BQ6DHV5 1058 aa13.57□□□□□ -0.24
SMAD3-202ENST00000439724 VPS54Q9P1Q0 977 aa13.57□□□□□ -0.24
SMAD3-202ENST00000439724 TAOK2Q9UL54 1235 aa13.57□□□□□ -0.24
SMAD3-202ENST00000439724 SCN9AQ15858 1988 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 C10orf71Q711Q0 1435 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 MYH8P13535 1937 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 USP17L3A6NCW0 530 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 USP17L4A6NCW7 530 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 SCG2P13521 617 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 MARCKSP29966 332 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-202ENST00000439724 NR5A1Q13285 461 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 ANO6Q4KMQ2 910 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 USP17L1Q7RTZ2 530 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 OXER1Q8TDS5 423 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 C7orf43Q8WVR3 580 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 TIGD1Q96MW7 591 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 BRMS1Q9HCU9 246 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 USP25Q9UHP3 1055 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 HPSEQ9Y251 543 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 MYO3BQ8WXR4 1341 aa13.56□□□□□ -0.24
SMAD3-202ENST00000439724 ESPNB1AK53 854 aa13.55□□□□□ -0.24
SMAD3-202ENST00000439724 PFKFB1P16118 471 aa13.55□□□□□ -0.24
SMAD3-202ENST00000439724 CHRNA5P30532 468 aa13.55□□□□□ -0.24
SMAD3-202ENST00000439724 NOVP48745 357 aa13.55□□□□□ -0.24
SMAD3-202ENST00000439724 GABPAQ06546 454 aa13.55□□□□□ -0.24
SMAD3-202ENST00000439724 NPY5RQ15761 445 aa13.55□□□□□ -0.24
SMAD3-202ENST00000439724 STX1AQ16623 288 aa13.55□□□□□ -0.24
SMAD3-202ENST00000439724 PFKFB3Q16875 520 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-202ENST00000439724 STRIP1Q5VSL9 837 aa13.55□□□□□ -0.24
SMAD3-202ENST00000439724 RESP18Q5W5W9 173 aa13.55□□□□□ -0.24
SMAD3-202ENST00000439724 TEKT1Q969V4 418 aa13.55□□□□□ -0.24
SMAD3-202ENST00000439724 TMEM47Q9BQJ4 181 aa13.55□□□□□ -0.24
SMAD3-202ENST00000439724 MRIQ9BWK5 157 aa13.55□□□□□ -0.24
SMAD3-202ENST00000439724 RRAGDQ9NQL2 400 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-202ENST00000439724 hCG_1642624A0A1W2PR95 340 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 F8W031 263 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-202ENST00000439724 ZNF202O95125 648 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 HDLBPQ00341 1268 aaKnown RBP13.54□□□□□ -0.24
SMAD3-202ENST00000439724 SHC4Q6S5L8 630 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 KRI1Q8N9T8 703 aaKnown RBP13.54□□□□□ -0.24
SMAD3-202ENST00000439724 TNFRSF25Q93038 417 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 LZTS2Q9BRK4 669 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 MXD3Q9BW11 206 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 DBNDD1Q9H9R9 158 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 CBX8Q9HC52 389 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 SH3GLB2Q9NR46 395 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 MAD2L2Q9UI95 211 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 CEP131Q9UPN4 1083 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 PSME4Q14997 1843 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 ECE2O60344 883 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 PTPREP23469 700 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 DACT2Q5SW24 774 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 APOBEC3HQ6NTF7 200 aaKnown RBP13.54□□□□□ -0.24
SMAD3-202ENST00000439724 CDC42EP5Q6NZY7 148 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 ZSCAN30Q86W11 494 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 FAM177A1Q8N128 213 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-202ENST00000439724 SUPT20HQ8NEM7 779 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 ZDHHC15Q96MV8 337 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 SDF4Q9BRK5 362 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 DDX4Q9NQI0 724 aaKnown RBP13.54□□□□□ -0.24
SMAD3-202ENST00000439724 USP40Q9NVE5 1235 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 CCDC39Q9UFE4 941 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 SWAP70Q9UH65 585 aa13.54□□□□□ -0.24
SMAD3-202ENST00000439724 GREB1LQ9C091 1923 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-202ENST00000439724 PALM3A6NDB9 673 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms