RNA–Protein interactions for RNA: ENST00000439512.5

TOM1-207, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-207ENST00000439512 PABPC4Q13310 644 aaKnown RBP eCLIP19.7■□□□□ 0.74
TOM1-207ENST00000439512 ZYXQ15942 572 aaKnown RBP19.7■□□□□ 0.74
TOM1-207ENST00000439512 VPS53Q5VIR6 699 aa19.7■□□□□ 0.74
TOM1-207ENST00000439512 TMEM179Q6ZVK1 233 aa19.7■□□□□ 0.74
TOM1-207ENST00000439512 EMILIN3Q9NT22 766 aa19.7■□□□□ 0.74
TOM1-207ENST00000439512 TRIM17Q9Y577 477 aa19.7■□□□□ 0.74
TOM1-207ENST00000439512 ROBO3Q96MS0 1386 aa19.7■□□□□ 0.74
TOM1-207ENST00000439512 CAPN15O75808 1086 aa19.69■□□□□ 0.74
TOM1-207ENST00000439512 ECM2O94769 699 aaPredicted RBP19.69■□□□□ 0.74
TOM1-207ENST00000439512 OSBPP22059 807 aa19.69■□□□□ 0.74
TOM1-207ENST00000439512 TTC22Q5TAA0 569 aa19.69■□□□□ 0.74
TOM1-207ENST00000439512 SMCR8Q8TEV9 937 aaPredicted RBP19.69■□□□□ 0.74
TOM1-207ENST00000439512 DIAPH3Q9NSV4 1193 aa19.69■□□□□ 0.74
TOM1-207ENST00000439512 PNMA3Q9UL41 463 aa19.69■□□□□ 0.74
TOM1-207ENST00000439512 FOXP2O15409 715 aa19.68■□□□□ 0.74
TOM1-207ENST00000439512 NEFLP07196 543 aa19.68■□□□□ 0.74
TOM1-207ENST00000439512 BCRP11274 1271 aa19.68■□□□□ 0.74
TOM1-207ENST00000439512 KIF22Q14807 665 aa19.68■□□□□ 0.74
TOM1-207ENST00000439512 PKN2Q16513 984 aaKnown RBP19.68■□□□□ 0.74
TOM1-207ENST00000439512 CWC27Q6UX04 472 aaKnown RBP19.68■□□□□ 0.74
TOM1-207ENST00000439512 OTOP1Q7RTM1 612 aa19.68■□□□□ 0.74
TOM1-207ENST00000439512 KIAA1683Q9H0B3 1180 aa19.68■□□□□ 0.74
TOM1-207ENST00000439512 ASCC2Q9H1I8 757 aaPredicted RBP19.68■□□□□ 0.74
TOM1-207ENST00000439512 EFCC1Q9HA90 598 aa19.68■□□□□ 0.74
TOM1-207ENST00000439512 MGAMO43451 1857 aa19.67■□□□□ 0.74
TOM1-207ENST00000439512 A0A1W2PRG0 241 aa19.67■□□□□ 0.74
TOM1-207ENST00000439512 HIP1O00291 1037 aa19.67■□□□□ 0.74
TOM1-207ENST00000439512 PRDM1O75626 825 aa19.67■□□□□ 0.74
TOM1-207ENST00000439512 GSPT1P15170 499 aaKnown RBP19.67■□□□□ 0.74
TOM1-207ENST00000439512 CTGFP29279 349 aa19.67■□□□□ 0.74
TOM1-207ENST00000439512 USP14P54578 494 aa19.67■□□□□ 0.74
TOM1-207ENST00000439512 PPARAQ07869 468 aa19.67■□□□□ 0.74
TOM1-207ENST00000439512 ARHGEF6Q15052 776 aa19.67■□□□□ 0.74
TOM1-207ENST00000439512 CENPQQ7L2Z9 268 aaPredicted RBP19.67■□□□□ 0.74
TOM1-207ENST00000439512 ZNF589Q86UQ0 364 aaPredicted RBP19.67■□□□□ 0.74
TOM1-207ENST00000439512 ZNF444Q8N0Y2 327 aaPredicted RBP19.67■□□□□ 0.74
TOM1-207ENST00000439512 SLC3A2P08195 630 aaKnown RBP19.66■□□□□ 0.74
TOM1-207ENST00000439512 RASA1P20936 1047 aa19.66■□□□□ 0.74
TOM1-207ENST00000439512 HOXA7P31268 230 aaPredicted RBP19.66■□□□□ 0.74
TOM1-207ENST00000439512 IRX3P78415 501 aaPredicted RBP19.66■□□□□ 0.74
TOM1-207ENST00000439512 LACTBP83111 547 aaPredicted RBP19.66■□□□□ 0.74
TOM1-207ENST00000439512 CLEC10AQ8IUN9 316 aa19.66■□□□□ 0.74
TOM1-207ENST00000439512 SIAH1Q8IUQ4 282 aa19.66■□□□□ 0.74
TOM1-207ENST00000439512 P2RX7Q99572 595 aaKnown RBP19.66■□□□□ 0.74
TOM1-207ENST00000439512 ARHGAP39Q9C0H5 1083 aa19.66■□□□□ 0.74
TOM1-207ENST00000439512 ZNF287Q9HBT7 754 aa19.66■□□□□ 0.74
TOM1-207ENST00000439512 FGAP02671 866 aa19.65■□□□□ 0.74
TOM1-207ENST00000439512 CENPBP07199 599 aaPredicted RBP19.65■□□□□ 0.74
TOM1-207ENST00000439512 HSPD1P10809 573 aaKnown RBP19.65■□□□□ 0.74
TOM1-207ENST00000439512 MFAP1P55081 439 aaKnown RBP19.65■□□□□ 0.74
TOM1-207ENST00000439512 ATP2B2Q01814 1243 aa19.65■□□□□ 0.74
TOM1-207ENST00000439512 ICA1Q05084 483 aa19.65■□□□□ 0.74
TOM1-207ENST00000439512 PDE4BQ07343 736 aa19.65■□□□□ 0.74
TOM1-207ENST00000439512 ALX1Q15699 326 aa19.65■□□□□ 0.74
TOM1-207ENST00000439512 FBXO46Q6PJ61 603 aaPredicted RBP19.65■□□□□ 0.74
TOM1-207ENST00000439512 ANKRD13CQ8N6S4 541 aa19.65■□□□□ 0.74
TOM1-207ENST00000439512 CCDC136Q96JN2 1154 aa19.65■□□□□ 0.74
TOM1-207ENST00000439512 C12orf42Q96LP6 360 aa19.65■□□□□ 0.74
TOM1-207ENST00000439512 KANSL2Q9H9L4 492 aa19.65■□□□□ 0.74
TOM1-207ENST00000439512 ARHGEF10LQ9HCE6 1279 aa19.65■□□□□ 0.74
TOM1-207ENST00000439512 CCDC171Q6TFL3 1326 aa19.65■□□□□ 0.74
TOM1-207ENST00000439512 EEF2P13639 858 aaKnown RBP19.64■□□□□ 0.73
TOM1-207ENST00000439512 PSMC4P43686 418 aa19.64■□□□□ 0.73
TOM1-207ENST00000439512 CTDSPL2Q05D32 466 aa19.64■□□□□ 0.73
TOM1-207ENST00000439512 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.64■□□□□ 0.73
TOM1-207ENST00000439512 HPS5Q9UPZ3 1129 aa19.64■□□□□ 0.73
TOM1-207ENST00000439512 CCDC85CA6NKD9 419 aa19.63■□□□□ 0.73
TOM1-207ENST00000439512 USP17L15C9J2P7 530 aa19.63■□□□□ 0.73
TOM1-207ENST00000439512 USP17L13C9JLJ4 530 aa19.63■□□□□ 0.73
TOM1-207ENST00000439512 USP17L11C9JVI0 530 aa19.63■□□□□ 0.73
TOM1-207ENST00000439512 USP17L18D6R9N7 530 aa19.63■□□□□ 0.73
TOM1-207ENST00000439512 USP17L22D6RA61 530 aa19.63■□□□□ 0.73
TOM1-207ENST00000439512 USP17L17D6RBQ6 530 aa19.63■□□□□ 0.73
TOM1-207ENST00000439512 USP17L19D6RCP7 530 aa19.63■□□□□ 0.73
TOM1-207ENST00000439512 USP17L20D6RJB6 530 aa19.63■□□□□ 0.73
TOM1-207ENST00000439512 FMNL1O95466 1100 aaPredicted RBP19.63■□□□□ 0.73
TOM1-207ENST00000439512 GCLCP48506 637 aaPredicted RBP19.63■□□□□ 0.73
TOM1-207ENST00000439512 USP17L24Q0WX57 530 aa19.63■□□□□ 0.73
TOM1-207ENST00000439512 INCENPQ9NQS7 918 aa19.63■□□□□ 0.73
TOM1-207ENST00000439512 PTPN22Q9Y2R2 807 aa19.63■□□□□ 0.73
TOM1-207ENST00000439512 VCAM1P19320 739 aa19.62■□□□□ 0.73
TOM1-207ENST00000439512 SKAP1Q86WV1 359 aa19.62■□□□□ 0.73
TOM1-207ENST00000439512 TMX2Q9Y320 296 aa19.62■□□□□ 0.73
TOM1-207ENST00000439512 RLFQ13129 1914 aa19.62■□□□□ 0.73
TOM1-207ENST00000439512 PARP14Q460N5 1801 aa19.61■□□□□ 0.73
TOM1-207ENST00000439512 HERVK_113P62684 666 aa19.61■□□□□ 0.73
TOM1-207ENST00000439512 TFAP4Q01664 338 aa19.61■□□□□ 0.73
TOM1-207ENST00000439512 FAM47AQ5JRC9 791 aa19.61■□□□□ 0.73
TOM1-207ENST00000439512 KIAA1755Q5JYT7 1200 aa19.61■□□□□ 0.73
TOM1-207ENST00000439512 POTEEQ6S8J3 1075 aa19.61■□□□□ 0.73
TOM1-207ENST00000439512 CATSPERGQ6ZRH7 1159 aa19.61■□□□□ 0.73
TOM1-207ENST00000439512 TRIM47Q96LD4 638 aa19.61■□□□□ 0.73
TOM1-207ENST00000439512 RPAP3Q9H6T3 665 aaPredicted RBP19.61■□□□□ 0.73
TOM1-207ENST00000439512 SH2D4AQ9H788 454 aa19.61■□□□□ 0.73
TOM1-207ENST00000439512 ANAPC4Q9UJX5 808 aa19.61■□□□□ 0.73
TOM1-207ENST00000439512 A0A0G2JMZ2 1700 aa19.61■□□□□ 0.73
TOM1-207ENST00000439512 PEX10O60683 326 aa19.6■□□□□ 0.73
TOM1-207ENST00000439512 TSPY3P0CV98 308 aa19.6■□□□□ 0.73
TOM1-207ENST00000439512 TSPY8P0CW00 308 aa19.6■□□□□ 0.73
TOM1-207ENST00000439512 FCGRTP55899 365 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms