RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 DYNLL2Q96FJ2 89 aa12.51□□□□□ -0.41
MCF2L-216ENST00000439475 NAPBQ9H115 298 aa12.51□□□□□ -0.41
MCF2L-216ENST00000439475 SH2D4AQ9H788 454 aa12.51□□□□□ -0.41
MCF2L-216ENST00000439475 ARHGEF10LQ9HCE6 1279 aa12.51□□□□□ -0.41
MCF2L-216ENST00000439475 HELLSQ9NRZ9 838 aa12.51□□□□□ -0.41
MCF2L-216ENST00000439475 M0R2C6 588 aa12.5□□□□□ -0.41
MCF2L-216ENST00000439475 BCRP11274 1271 aa12.5□□□□□ -0.41
MCF2L-216ENST00000439475 SEPT2Q15019 361 aa12.5□□□□□ -0.41
MCF2L-216ENST00000439475 PLEKHM2Q8IWE5 1019 aa12.5□□□□□ -0.41
MCF2L-216ENST00000439475 C12orf42Q96LP6 360 aa12.5□□□□□ -0.41
MCF2L-216ENST00000439475 KIAA1683Q9H0B3 1180 aa12.5□□□□□ -0.41
MCF2L-216ENST00000439475 ASCC2Q9H1I8 757 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-216ENST00000439475 MYH8P13535 1937 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 ADGRA2Q96PE1 1338 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 CYP2D7A0A087X1C5 515 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 USP17L15C9J2P7 530 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 USP17L13C9JLJ4 530 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 USP17L11C9JVI0 530 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 USP17L18D6R9N7 530 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 USP17L22D6RA61 530 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 USP17L17D6RBQ6 530 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 USP17L19D6RCP7 530 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 USP17L20D6RJB6 530 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 HIP1O00291 1037 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 MFAP1P55081 439 aaKnown RBP12.49□□□□□ -0.41
MCF2L-216ENST00000439475 PDE4BQ07343 736 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 USP17L24Q0WX57 530 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 ZYXQ15942 572 aaKnown RBP12.49□□□□□ -0.41
MCF2L-216ENST00000439475 FAM110CQ1W6H9 321 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 ANKRD13CQ8N6S4 541 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 SLC44A5Q8NCS7 719 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 SEC62Q99442 399 aaKnown RBP12.49□□□□□ -0.41
MCF2L-216ENST00000439475 KANSL2Q9H9L4 492 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 EMILIN3Q9NT22 766 aa12.49□□□□□ -0.41
MCF2L-216ENST00000439475 ECM2O94769 699 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-216ENST00000439475 AKR1B1P15121 316 aa12.48□□□□□ -0.41
MCF2L-216ENST00000439475 SHROOM1Q2M3G4 852 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-216ENST00000439475 CCAR1Q8IX12 1150 aaKnown RBP12.48□□□□□ -0.41
MCF2L-216ENST00000439475 RAET1EQ8TD07 263 aa12.48□□□□□ -0.41
MCF2L-216ENST00000439475 COA7Q96BR5 231 aa12.48□□□□□ -0.41
MCF2L-216ENST00000439475 SRRDQ9UH36 339 aa12.48□□□□□ -0.41
MCF2L-216ENST00000439475 TNPO2O14787 897 aaKnown RBP12.47□□□□□ -0.41
MCF2L-216ENST00000439475 SDSP20132 328 aa12.47□□□□□ -0.41
MCF2L-216ENST00000439475 GUCY1A2P33402 732 aa12.47□□□□□ -0.41
MCF2L-216ENST00000439475 EVX2Q03828 476 aa12.47□□□□□ -0.41
MCF2L-216ENST00000439475 ICA1Q05084 483 aa12.47□□□□□ -0.41
MCF2L-216ENST00000439475 SLC9C1Q4G0N8 1177 aa12.47□□□□□ -0.41
MCF2L-216ENST00000439475 STK11IPQ8N1F8 1099 aa12.47□□□□□ -0.41
MCF2L-216ENST00000439475 ACER1Q8TDN7 264 aa12.47□□□□□ -0.41
MCF2L-216ENST00000439475 LPAR1Q92633 364 aa12.47□□□□□ -0.41
MCF2L-216ENST00000439475 P2RX7Q99572 595 aaKnown RBP12.47□□□□□ -0.41
MCF2L-216ENST00000439475 DDX60LQ5H9U9 1706 aaKnown RBP12.47□□□□□ -0.41
MCF2L-216ENST00000439475 MYPNQ86TC9 1320 aa12.46□□□□□ -0.41
MCF2L-216ENST00000439475 HERVK_113P62684 666 aa12.46□□□□□ -0.41
MCF2L-216ENST00000439475 ATP2B2Q01814 1243 aa12.46□□□□□ -0.41
MCF2L-216ENST00000439475 CATSPERGQ6ZRH7 1159 aa12.46□□□□□ -0.41
MCF2L-216ENST00000439475 GPRC5AQ8NFJ5 357 aa12.46□□□□□ -0.41
MCF2L-216ENST00000439475 TRIM47Q96LD4 638 aa12.46□□□□□ -0.41
MCF2L-216ENST00000439475 TMEM106CQ9BVX2 250 aa12.46□□□□□ -0.41
MCF2L-216ENST00000439475 ARHGAP39Q9C0H5 1083 aa12.46□□□□□ -0.41
MCF2L-216ENST00000439475 EPB41L4AQ9HCS5 686 aaPredicted RBP12.46□□□□□ -0.41
MCF2L-216ENST00000439475 DIAPH3Q9NSV4 1193 aa12.46□□□□□ -0.41
MCF2L-216ENST00000439475 HOXC10Q9NYD6 342 aa12.46□□□□□ -0.41
MCF2L-216ENST00000439475 TMX2Q9Y320 296 aa12.46□□□□□ -0.41
MCF2L-216ENST00000439475 PTCH2Q9Y6C5 1203 aa12.46□□□□□ -0.41
MCF2L-216ENST00000439475 LOC285556D6RIA3 1793 aa12.46□□□□□ -0.42
MCF2L-216ENST00000439475 CCNA1P78396 465 aa12.45□□□□□ -0.42
MCF2L-216ENST00000439475 PPARAQ07869 468 aa12.45□□□□□ -0.42
MCF2L-216ENST00000439475 NMIQ13287 307 aaPredicted RBP12.45□□□□□ -0.42
MCF2L-216ENST00000439475 COG2Q14746 738 aa12.45□□□□□ -0.42
MCF2L-216ENST00000439475 ALX1Q15699 326 aa12.45□□□□□ -0.42
MCF2L-216ENST00000439475 PPP4R3BQ5MIZ7 849 aa12.45□□□□□ -0.42
MCF2L-216ENST00000439475 CCDC129Q6ZRS4 1044 aa12.45□□□□□ -0.42
MCF2L-216ENST00000439475 RPAP3Q9H6T3 665 aaPredicted RBP12.45□□□□□ -0.42
MCF2L-216ENST00000439475 VCPKMTQ9H867 229 aa12.45□□□□□ -0.42
MCF2L-216ENST00000439475 CWC22Q9HCG8 908 aaKnown RBP12.45□□□□□ -0.42
MCF2L-216ENST00000439475 GOPCQ9HD26 462 aa12.45□□□□□ -0.42
MCF2L-216ENST00000439475 MORF4L1Q9UBU8 362 aa12.45□□□□□ -0.42
MCF2L-216ENST00000439475 ROBO3Q96MS0 1386 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 A0A1W2PRG0 241 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 SMIM22K7EJ46 135 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 TSPY3P0CV98 308 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 TSPY8P0CW00 308 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 EEF2P13639 858 aaKnown RBP12.44□□□□□ -0.42
MCF2L-216ENST00000439475 VCAM1P19320 739 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 RASA1P20936 1047 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 RGS19P49795 217 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 UBXN2AP68543 259 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 CAP1Q01518 475 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 ARMC5Q96C12 935 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 FAM227BQ96M60 508 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 PAGR1Q9BTK6 254 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 NYAP2Q9P242 653 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 RABGAP1Q9Y3P9 1069 aa12.44□□□□□ -0.42
MCF2L-216ENST00000439475 CCDC171Q6TFL3 1326 aa12.43□□□□□ -0.42
MCF2L-216ENST00000439475 MGAMO43451 1857 aa12.43□□□□□ -0.42
MCF2L-216ENST00000439475 A0A0D9SFI3 127 aa12.43□□□□□ -0.42
MCF2L-216ENST00000439475 WDR46O15213 610 aaKnown RBP12.43□□□□□ -0.42
MCF2L-216ENST00000439475 RAD21O60216 631 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms