RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 TRMT44Q8IYL2 757 aaKnown RBP17.79■□□□□ 0.44
DHFR-201ENST00000439211 ENGASEQ8NFI3 743 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 RSRC1Q96IZ7 334 aaKnown RBP17.79■□□□□ 0.44
DHFR-201ENST00000439211 MRFAP1Q9Y605 127 aa17.79■□□□□ 0.44
DHFR-201ENST00000439211 NWD1Q149M9 1564 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 PCDH11XQ9BZA7 1347 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 PCDH11YQ9BZA8 1340 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 IL2RBP14784 551 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 ARMC2Q8NEN0 867 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 FANCLQ9NW38 375 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 MBD4O95243 580 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 GCFC2P16383 781 aaKnown RBP17.78■□□□□ 0.44
DHFR-201ENST00000439211 MAP3K9P80192 1104 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 PPFIBP1Q86W92 1011 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 ATRIPQ8WXE1 791 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 CAPS2Q9BXY5 557 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 STX17P56962 302 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 IGSF22Q8N9C0 903 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 GREM2Q9H772 168 aa17.78■□□□□ 0.44
DHFR-201ENST00000439211 XBP1P17861 261 aa17.77■□□□□ 0.44
DHFR-201ENST00000439211 BEND6Q5SZJ8 279 aaPredicted RBP17.77■□□□□ 0.44
DHFR-201ENST00000439211 WASF1Q92558 559 aa17.77■□□□□ 0.44
DHFR-201ENST00000439211 ARMT1Q9H993 441 aa17.77■□□□□ 0.44
DHFR-201ENST00000439211 POLR2DO15514 142 aaKnown RBP17.77■□□□□ 0.44
DHFR-201ENST00000439211 CPP00450 1065 aa17.77■□□□□ 0.44
DHFR-201ENST00000439211 ADKP55263 362 aaKnown RBP17.77■□□□□ 0.44
DHFR-201ENST00000439211 RIN2Q8WYP3 895 aaPredicted RBP17.77■□□□□ 0.44
DHFR-201ENST00000439211 NUCKS1Q9H1E3 243 aaKnown RBP17.77■□□□□ 0.44
DHFR-201ENST00000439211 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.77■□□□□ 0.44
DHFR-201ENST00000439211 HEG1Q9ULI3 1381 aa17.77■□□□□ 0.44
DHFR-201ENST00000439211 BTBD18B2RXH4 712 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 SNAP23O00161 211 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 WTAPQ15007 396 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 SLC39A14Q15043 492 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 CCDC189A1A4V9 331 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 ARHGAP25P42331 645 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 RTN1Q16799 776 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 DIS3L2Q8IYB7 885 aaKnown RBP17.76■□□□□ 0.43
DHFR-201ENST00000439211 DACH1Q9UI36 760 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 PCDHA5Q9Y5H7 936 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 hCG_1642624A0A1W2PR95 340 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 RPS6KA5O75582 802 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 PHKA1P46020 1223 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 VSNL1P62760 191 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 APOA5Q6Q788 366 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 KRI1Q8N9T8 703 aaKnown RBP17.76■□□□□ 0.43
DHFR-201ENST00000439211 MICAL1Q8TDZ2 1067 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 TACO1Q9BSH4 297 aaKnown RBP17.76■□□□□ 0.43
DHFR-201ENST00000439211 UBXN6Q9BZV1 441 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 SLC4A4Q9Y6R1 1079 aa17.76■□□□□ 0.43
DHFR-201ENST00000439211 RANBP6O60518 1105 aaKnown RBP17.75■□□□□ 0.43
DHFR-201ENST00000439211 PIP4K2BP78356 416 aa17.75■□□□□ 0.43
DHFR-201ENST00000439211 IRX2Q9BZI1 471 aaPredicted RBP17.75■□□□□ 0.43
DHFR-201ENST00000439211 ASAP1Q9ULH1 1129 aa17.75■□□□□ 0.43
DHFR-201ENST00000439211 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.75■□□□□ 0.43
DHFR-201ENST00000439211 ILDR1Q86SU0 546 aaPredicted RBP17.75■□□□□ 0.43
DHFR-201ENST00000439211 KDM6AO15550 1401 aaPredicted RBP17.75■□□□□ 0.43
DHFR-201ENST00000439211 CIAO1O76071 339 aa17.75■□□□□ 0.43
DHFR-201ENST00000439211 MCAMP43121 646 aa17.75■□□□□ 0.43
DHFR-201ENST00000439211 PPARDQ03181 441 aa17.75■□□□□ 0.43
DHFR-201ENST00000439211 TRIM65Q6PJ69 517 aa17.75■□□□□ 0.43
DHFR-201ENST00000439211 CDC23Q9UJX2 597 aa17.75■□□□□ 0.43
DHFR-201ENST00000439211 NFE2L3Q9Y4A8 694 aa17.75■□□□□ 0.43
DHFR-201ENST00000439211 MAP2K7O14733 419 aa17.74■□□□□ 0.43
DHFR-201ENST00000439211 KIF4AO95239 1232 aa17.74■□□□□ 0.43
DHFR-201ENST00000439211 CABP5Q9NP86 173 aa17.74■□□□□ 0.43
DHFR-201ENST00000439211 NALCNQ8IZF0 1738 aa17.74■□□□□ 0.43
DHFR-201ENST00000439211 TUBBP07437 444 aa17.74■□□□□ 0.43
DHFR-201ENST00000439211 SLC5A1P13866 664 aa17.74■□□□□ 0.43
DHFR-201ENST00000439211 MCM3P25205 808 aa17.74■□□□□ 0.43
DHFR-201ENST00000439211 MB21D2Q8IYB1 491 aaPredicted RBP17.74■□□□□ 0.43
DHFR-201ENST00000439211 PALLDQ8WX93 1383 aa17.74■□□□□ 0.43
DHFR-201ENST00000439211 PDE6AP16499 860 aa17.74■□□□□ 0.43
DHFR-201ENST00000439211 FILIP1LQ4L180 1135 aa17.74■□□□□ 0.43
DHFR-201ENST00000439211 SH3GL3Q99963 347 aa17.74■□□□□ 0.43
DHFR-201ENST00000439211 HINFPQ9BQA5 517 aa17.74■□□□□ 0.43
DHFR-201ENST00000439211 L1RE1Q9UN81 338 aa17.74■□□□□ 0.43
DHFR-201ENST00000439211 KIF13AQ9H1H9 1805 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 PSMD2Q13200 908 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 LONRF3Q496Y0 759 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 TBC1D10CQ8IV04 446 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 SPDL1Q96EA4 605 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 PNKPQ96T60 521 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 WWC3Q9ULE0 1092 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 ENO4A6NNW6 628 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 CUTAO60888 179 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 SLC4A8Q2Y0W8 1093 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 CYB5R4Q7L1T6 521 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 PIK3R5Q8WYR1 880 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 RFX7Q2KHR2 1363 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 GOLGA6BA6NDN3 693 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 PPP1R12BO60237 982 aaPredicted RBP17.73■□□□□ 0.43
DHFR-201ENST00000439211 CAND2O75155 1236 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 ZMYM6O95789 1325 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 CASP7P55210 303 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 CCDC121Q6ZUS5 278 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 TOPAZ1Q8N9V7 1692 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 KAT14Q9H8E8 782 aa17.73■□□□□ 0.43
DHFR-201ENST00000439211 ANTXR2P58335 489 aa17.72■□□□□ 0.43
DHFR-201ENST00000439211 CCDC181Q5TID7 509 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 5.9 ms