RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 MCATQ8IVS2 390 aaKnown RBP5.43□□□□□ -1.54
HMGB1P18-201ENST00000438801 JARID2Q92833 1246 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P18-201ENST00000438801 CCDC120Q96HB5 630 aa5.43□□□□□ -1.54
HMGB1P18-201ENST00000438801 SMARCA2P51531 1590 aa5.42□□□□□ -1.54
HMGB1P18-201ENST00000438801 RPL6Q02878 288 aaKnown RBP5.42□□□□□ -1.54
HMGB1P18-201ENST00000438801 PRR23BQ6ZRT6 265 aa5.42□□□□□ -1.54
HMGB1P18-201ENST00000438801 PIWIL2Q8TC59 973 aaKnown RBP5.42□□□□□ -1.54
HMGB1P18-201ENST00000438801 ACSF2Q96CM8 615 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P18-201ENST00000438801 SLAMF8Q9P0V8 285 aa5.42□□□□□ -1.54
HMGB1P18-201ENST00000438801 PARP2Q9UGN5 583 aa5.42□□□□□ -1.54
HMGB1P18-201ENST00000438801 ADAM30Q9UKF2 790 aa5.42□□□□□ -1.54
HMGB1P18-201ENST00000438801 TLR6Q9Y2C9 796 aa5.42□□□□□ -1.54
HMGB1P18-201ENST00000438801 ESR1P03372 595 aa5.41□□□□□ -1.54
HMGB1P18-201ENST00000438801 ST13P50502 369 aaKnown RBP5.41□□□□□ -1.54
HMGB1P18-201ENST00000438801 DAB2P98082 770 aa5.41□□□□□ -1.54
HMGB1P18-201ENST00000438801 PSMD2Q13200 908 aa5.41□□□□□ -1.54
HMGB1P18-201ENST00000438801 TAF1CQ15572 869 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P18-201ENST00000438801 SND1Q7KZF4 910 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGB1P18-201ENST00000438801 TMPRSS7Q7RTY8 843 aa5.41□□□□□ -1.54
HMGB1P18-201ENST00000438801 TTC6Q86TZ1 520 aa5.41□□□□□ -1.54
HMGB1P18-201ENST00000438801 DNAJB8Q8NHS0 232 aa5.41□□□□□ -1.54
HMGB1P18-201ENST00000438801 NOC4LQ9BVI4 516 aaKnown RBP5.41□□□□□ -1.54
HMGB1P18-201ENST00000438801 DNAJC25-GNG10A0A024R161 153 aa5.4□□□□□ -1.54
HMGB1P18-201ENST00000438801 TSPAN15O95858 294 aa5.4□□□□□ -1.54
HMGB1P18-201ENST00000438801 RAP1GAPP47736 663 aa5.4□□□□□ -1.54
HMGB1P18-201ENST00000438801 FBLN7Q53RD9 439 aa5.4□□□□□ -1.54
HMGB1P18-201ENST00000438801 DIEXFQ68CQ4 756 aaKnown RBP5.4□□□□□ -1.54
HMGB1P18-201ENST00000438801 SPOCD1Q6ZMY3 1216 aa5.4□□□□□ -1.54
HMGB1P18-201ENST00000438801 ABHD4Q8TB40 342 aa5.4□□□□□ -1.54
HMGB1P18-201ENST00000438801 Q96M66 194 aa5.4□□□□□ -1.54
HMGB1P18-201ENST00000438801 PPP1R16BQ96T49 567 aa5.4□□□□□ -1.54
HMGB1P18-201ENST00000438801 CEP131Q9UPN4 1083 aa5.4□□□□□ -1.54
HMGB1P18-201ENST00000438801 WASH4PA8MWX3 477 aa5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 RAC2P15153 192 aa5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 PLCG1P19174 1290 aa5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 TPP2P29144 1249 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 XPCQ01831 940 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 RALGPS1Q5JS13 557 aa5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 BNC2Q6ZN30 1099 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 SYDE1Q6ZW31 735 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 CCDC84Q86UT8 332 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 CREG2Q8IUH2 290 aa5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 CILP2Q8IUL8 1156 aa5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 PHC3Q8NDX5 983 aa5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 PPP1R13LQ8WUF5 828 aa5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 DIRC2Q96SL1 478 aa5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 DUSP15Q9H1R2 295 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 TRIT1Q9H3H1 467 aaKnown RBP5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 TMEM59LQ9UK28 342 aa5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 CORINQ9Y5Q5 1042 aa5.39□□□□□ -1.55
HMGB1P18-201ENST00000438801 UPK3BL1B0FP48 263 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 UPK3BL2E5RIL1 263 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 BPNT1O95861 308 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 CTSHP09668 335 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 HK2P52789 917 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 TMC4Q7Z404 712 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 AEBP1Q8IUX7 1158 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 FBXO15Q8NCQ5 510 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 FAM13CQ8NE31 585 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 CYB5D2Q8WUJ1 264 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 FAM161BQ96MY7 647 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 TOX2Q96NM4 488 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 ADAMTS10Q9H324 1103 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 NSUN3Q9H649 340 aaKnown RBP5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 USP31Q70CQ4 1352 aa5.38□□□□□ -1.55
HMGB1P18-201ENST00000438801 F6X3S4 739 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 CILPO75339 1184 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 CFPP27918 469 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 YARSP54577 528 aaKnown RBP5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 ERVFC1P60507 584 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 LMNB2Q03252 620 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 CAMK2GQ13555 558 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 GAB4Q2WGN9 574 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 TMEM201Q5SNT2 666 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 DTWD2Q8NBA8 298 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 MYLIPQ8WY64 445 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 GPR62Q9BZJ7 368 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 GPATCH2Q9NW75 528 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 DUSP13Q9UII6 198 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 KCNH3Q9ULD8 1083 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 NACADO15069 1562 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 CCDC180Q9P1Z9 1646 aa5.37□□□□□ -1.55
HMGB1P18-201ENST00000438801 FAM221AA4D161 298 aa5.36□□□□□ -1.55
HMGB1P18-201ENST00000438801 F13A1P00488 732 aa5.36□□□□□ -1.55
HMGB1P18-201ENST00000438801 HPXP02790 462 aa5.36□□□□□ -1.55
HMGB1P18-201ENST00000438801 C1QTNF9P0C862 333 aa5.36□□□□□ -1.55
HMGB1P18-201ENST00000438801 SRFP11831 508 aa5.36□□□□□ -1.55
HMGB1P18-201ENST00000438801 DNAJC14Q6Y2X3 702 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P18-201ENST00000438801 TSPYL5Q86VY4 417 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P18-201ENST00000438801 ANKLE2Q86XL3 938 aa5.36□□□□□ -1.55
HMGB1P18-201ENST00000438801 SLFN12Q8IYM2 578 aa5.36□□□□□ -1.55
HMGB1P18-201ENST00000438801 GATAD2BQ8WXI9 593 aa5.36□□□□□ -1.55
HMGB1P18-201ENST00000438801 CRELD1Q96HD1 420 aa5.36□□□□□ -1.55
HMGB1P18-201ENST00000438801 SHROOM4Q9ULL8 1493 aa5.36□□□□□ -1.55
HMGB1P18-201ENST00000438801 NESP48681 1621 aa5.36□□□□□ -1.55
HMGB1P18-201ENST00000438801 NFIBO00712 420 aa5.35□□□□□ -1.55
HMGB1P18-201ENST00000438801 PF4P02776 101 aa5.35□□□□□ -1.55
HMGB1P18-201ENST00000438801 KRT1P04264 644 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms