RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 N4BP3O15049 544 aa13.11□□□□□ -0.31
TRAPPC9-202ENST00000438773 NEMFO60524 1076 aa13.11□□□□□ -0.31
TRAPPC9-202ENST00000438773 TRIM47Q96LD4 638 aa13.11□□□□□ -0.31
TRAPPC9-202ENST00000438773 EXOC1Q9NV70 894 aa13.11□□□□□ -0.31
TRAPPC9-202ENST00000438773 PCDHA7Q9UN72 937 aa13.11□□□□□ -0.31
TRAPPC9-202ENST00000438773 KLRF2D3W0D1 207 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 MTIF2P46199 727 aaKnown RBP13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 TSG101Q99816 390 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 CLIC4Q9Y696 253 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 PSDA5PKW4 1024 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 GSG1L2A8MUP6 293 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 NPR1P16066 1061 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 NOM1Q5C9Z4 860 aaKnown RBP13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 WDR78Q5VTH9 848 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 KRT79Q5XKE5 535 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 DYNLL2Q96FJ2 89 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 CBX8Q9HC52 389 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 IFNAR1P17181 557 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 NF2P35240 595 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 ZYXQ15942 572 aaKnown RBP13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 DPY19L2Q6NUT2 758 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 NIM1KQ8IY84 436 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 SLC4A9Q96Q91 983 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 LZTS2Q9BRK4 669 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 CD209Q9NNX6 404 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 GJB4Q9NTQ9 266 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 AXDND1Q5T1B0 1012 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 CNTNAP4Q9C0A0 1308 aa13.1□□□□□ -0.31
TRAPPC9-202ENST00000438773 XRN1Q8IZH2 1706 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 PEAK1Q9H792 1746 aa13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 DDAH1O94760 285 aa13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 SCG2P13521 617 aa13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 ARHGAP29Q52LW3 1261 aa13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 FKBP15Q5T1M5 1219 aa13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 CYB5R4Q7L1T6 521 aa13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 MB21D2Q8IYB1 491 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 LRRC47Q8N1G4 583 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 SPON1Q9HCB6 807 aa13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 IFNKQ9P0W0 207 aa13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 NEDD4P46934 1319 aa13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 PFKFB1P16118 471 aa13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 TMEM132AQ24JP5 1023 aa13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 NUP88Q99567 741 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 BRIP1Q9BX63 1249 aa13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 RNF26Q9BY78 433 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 RNF216Q9NWF9 866 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 SAMM50Q9Y512 469 aa13.09□□□□□ -0.31
TRAPPC9-202ENST00000438773 PSMA7O14818 248 aa13.08□□□□□ -0.31
TRAPPC9-202ENST00000438773 KIF20AO95235 890 aa13.08□□□□□ -0.31
TRAPPC9-202ENST00000438773 FGFR1OPO95684 399 aaKnown RBP13.08□□□□□ -0.31
TRAPPC9-202ENST00000438773 RESTQ13127 1097 aa13.08□□□□□ -0.31
TRAPPC9-202ENST00000438773 NONOQ15233 471 aaKnown RBP eCLIP13.08□□□□□ -0.314e-6■■■■□ 25.3
TRAPPC9-202ENST00000438773 ALX1Q15699 326 aa13.08□□□□□ -0.31
TRAPPC9-202ENST00000438773 ERMNQ8TAM6 284 aa13.08□□□□□ -0.31
TRAPPC9-202ENST00000438773 GPKOWQ92917 476 aaPredicted RBP eCLIP13.08□□□□□ -0.31
TRAPPC9-202ENST00000438773 MRVI1Q9Y6F6 885 aa13.08□□□□□ -0.31
TRAPPC9-202ENST00000438773 MYL5Q02045 173 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 KIF23Q02241 960 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 PRR5LQ6MZQ0 368 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 CAGE1Q8TC20 777 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 STAG1Q8WVM7 1258 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 RTEL1Q9NZ71 1219 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 CCNT1O60563 726 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 ZBTB7AO95365 584 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 CYP2D6P10635 497 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 SKILP12757 684 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 IL17RAQ96F46 866 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 KIF18AQ8NI77 898 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 BBXQ8WY36 941 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 STAMQ92783 540 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 CLIC6Q96NY7 704 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 LRRC27Q9C0I9 530 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 COA1Q9GZY4 146 aa13.08□□□□□ -0.32
TRAPPC9-202ENST00000438773 A0A087WWV3 80 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 FMNL1O95466 1100 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 FCHSD1Q86WN1 690 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 PLCD3Q8N3E9 789 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 CCDC102AQ96A19 550 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 MASTLQ96GX5 879 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 RCOR1Q9UKL0 485 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 SMCO2A6NFE2 343 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 TXKP42681 527 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 KRT25Q7Z3Z0 450 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 BLIDQ8IZY5 108 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 REXO1Q8N1G1 1221 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 ZNF397Q8NF99 534 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 ZNF512BQ96KM6 892 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 ARHGEF10LQ9HCE6 1279 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 SERPINB13Q9UIV8 391 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 FRMPD2Q68DX3 1309 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 ZSCAN12O43309 604 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 NR5A1Q13285 461 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 SH3RF3Q8TEJ3 882 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 FERMT2Q96AC1 680 aa13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 DCP1AQ9NPI6 582 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-202ENST00000438773 TUBGCP6Q96RT7 1819 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 CMA1P23946 247 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 NDUFA8P51970 172 aa13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 R3HDM1Q15032 1099 aaKnown RBP13.06□□□□□ -0.32
TRAPPC9-202ENST00000438773 KIAA1468Q9P260 1216 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms