RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 MTA3Q9BTC8 594 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 TM6SF1Q9BZW5 370 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 SH2D4AQ9H788 454 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 ELP3Q9H9T3 547 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 ARHGEF10LQ9HCE6 1279 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 TCP11L1Q9NUJ3 509 aa12.44□□□□□ -0.42
HLA-DMB-259ENST00000438510 IGKV6D-41A0A0C4DH26 115 aa12.43□□□□□ -0.42
HLA-DMB-259ENST00000438510 PTPRAP18433 802 aa12.43□□□□□ -0.42
HLA-DMB-259ENST00000438510 CASTP20810 708 aaKnown RBP12.43□□□□□ -0.42
HLA-DMB-259ENST00000438510 PPATQ06203 517 aa12.43□□□□□ -0.42
HLA-DMB-259ENST00000438510 SEPT2Q15019 361 aa12.43□□□□□ -0.42
HLA-DMB-259ENST00000438510 ADCK5Q3MIX3 580 aa12.43□□□□□ -0.42
HLA-DMB-259ENST00000438510 DHX32Q7L7V1 743 aaKnown RBP12.43□□□□□ -0.42
HLA-DMB-259ENST00000438510 CEP95Q96GE4 821 aa12.43□□□□□ -0.42
HLA-DMB-259ENST00000438510 CLMNQ96JQ2 1002 aa12.43□□□□□ -0.42
HLA-DMB-259ENST00000438510 TMEM87BQ96K49 555 aa12.43□□□□□ -0.42
HLA-DMB-259ENST00000438510 TBC1D32Q96NH3 1257 aa12.43□□□□□ -0.42
HLA-DMB-259ENST00000438510 ZSCAN10Q96SZ4 725 aaPredicted RBP12.43□□□□□ -0.42
HLA-DMB-259ENST00000438510 ZSWIM5Q9P217 1185 aa12.43□□□□□ -0.42
HLA-DMB-259ENST00000438510 TNKSO95271 1327 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 PRC1O43663 620 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 TTLL1O95922 423 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 ZBTB48P10074 688 aaPredicted RBP12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 GUCY1A2P33402 732 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 JAG1P78504 1218 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 PPIL2Q13356 520 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 SHROOM1Q2M3G4 852 aaPredicted RBP12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 IFFO2Q5TF58 517 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 RGMBQ6NW40 437 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 CYB5R4Q7L1T6 521 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 DNAJC5GQ8N7S2 189 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 ZNF280CQ8ND82 737 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 OPTNQ96CV9 577 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 OTUD5Q96G74 571 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 TTC14Q96N46 770 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 FEZ1Q99689 392 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 WDR18Q9BV38 432 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 MTMR4Q9NYA4 1195 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 SYNPO2Q9UMS6 1093 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 STX8Q9UNK0 236 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 CYP46A1Q9Y6A2 500 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 ZHX2Q9Y6X8 837 aa12.42□□□□□ -0.42
HLA-DMB-259ENST00000438510 THSD7BQ9C0I4 1608 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 RASSF10A6NK89 507 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 IFIT3O14879 490 aaKnown RBP12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 RPS6KB1P23443 525 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 ZNF157P51786 506 aaPredicted RBP12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 FGD1P98174 961 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 ATP2B2Q01814 1243 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 RUFY3Q7L099 469 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 DGKHQ86XP1 1220 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 RASAL3Q86YV0 1011 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 IL27Q8NEV9 243 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 CCDC102AQ96A19 550 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 WNK4Q96J92 1243 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 ZKSCAN3Q9BRR0 538 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 ZSWIM6Q9HCJ5 1215 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 IL17RBQ9NRM6 502 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 NYAP2Q9P242 653 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 PARP14Q460N5 1801 aa12.41□□□□□ -0.42
HLA-DMB-259ENST00000438510 USP17L10C9JJH3 530 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 CXCL11O14625 94 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 NMT2O60551 498 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 CAPN15O75808 1086 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 TOP1P11387 765 aaKnown RBP12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 EEF2P13639 858 aaKnown RBP12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 NOVP48745 357 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 USP14P54578 494 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 ANTXR2P58335 489 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 WTAPQ15007 396 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 TMEM67Q5HYA8 995 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 IFIT1BQ5T764 474 aaKnown RBP12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 PAXIP1Q6ZW49 1069 aaPredicted RBP12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 CHST3Q7LGC8 479 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 CLEC10AQ8IUN9 316 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 TMTC2Q8N394 836 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 ENAHQ8N8S7 591 aaPredicted RBP12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 NKX2-3Q8TAU0 364 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 GOPCQ9HD26 462 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 AFG3L2Q9Y4W6 797 aa12.4□□□□□ -0.42
HLA-DMB-259ENST00000438510 TRIM75PA6NK02 468 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 C19orf81C9J6K1 198 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 SH2B2O14492 632 aaPredicted RBP12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 SLC10A3P09131 477 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 KCNA4P22459 653 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 ECE1P42892 770 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 BACE1P56817 501 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 EXOSC10Q01780 885 aaKnown RBP12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 SPP2Q13103 211 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 SNAPC2Q13487 334 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 RABEP1Q15276 862 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 DEFB115Q30KQ5 88 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 SPRYD7Q5W111 196 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 CCDC84Q86UT8 332 aaPredicted RBP12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 ANKS1AQ92625 1134 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 MKL1Q969V6 931 aa12.39□□□□□ -0.43
HLA-DMB-259ENST00000438510 UPF3BQ9BZI7 483 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms