RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 MPHOSPH10O00566 681 aaKnown RBP21.29■■□□□ 1
NCSTN-208ENST00000438008 GNRH1P01148 92 aa21.29■■□□□ 1
NCSTN-208ENST00000438008 AKR1B1P15121 316 aa21.29■■□□□ 1
NCSTN-208ENST00000438008 USP14P54578 494 aa21.29■■□□□ 1
NCSTN-208ENST00000438008 MCMDC2Q4G0Z9 681 aa21.29■■□□□ 1
NCSTN-208ENST00000438008 ACER1Q8TDN7 264 aa21.29■■□□□ 1
NCSTN-208ENST00000438008 SMCR8Q8TEV9 937 aaPredicted RBP21.29■■□□□ 1
NCSTN-208ENST00000438008 RILPL2Q969X0 211 aa21.29■■□□□ 1
NCSTN-208ENST00000438008 HPS5Q9UPZ3 1129 aa21.29■■□□□ 1
NCSTN-208ENST00000438008 FOXP2O15409 715 aa21.28■■□□□ 1
NCSTN-208ENST00000438008 CAPN15O75808 1086 aa21.28■■□□□ 1
NCSTN-208ENST00000438008 CCDC129Q6ZRS4 1044 aa21.28■■□□□ 1
NCSTN-208ENST00000438008 FAM227BQ96M60 508 aa21.28■■□□□ 1
NCSTN-208ENST00000438008 FEZ1Q99689 392 aa21.28■■□□□ 1
NCSTN-208ENST00000438008 ASCC2Q9H1I8 757 aaPredicted RBP21.28■■□□□ 1
NCSTN-208ENST00000438008 PTPN22Q9Y2R2 807 aa21.28■■□□□ 1
NCSTN-208ENST00000438008 A0A0D9SFI3 127 aa21.27■■□□□ 1
NCSTN-208ENST00000438008 SDSP20132 328 aa21.27■■□□□ 1
NCSTN-208ENST00000438008 GCLCP48506 637 aaPredicted RBP21.27■■□□□ 1
NCSTN-208ENST00000438008 ARHGAP39Q9C0H5 1083 aa21.27■■□□□ 1
NCSTN-208ENST00000438008 NAPBQ9H115 298 aa21.27■■□□□ 1
NCSTN-208ENST00000438008 A0A1W2PRG0 241 aa21.26■□□□□ 0.99
NCSTN-208ENST00000438008 NMIQ13287 307 aaPredicted RBP21.26■□□□□ 0.99
NCSTN-208ENST00000438008 SIAH1Q8IUQ4 282 aa21.26■□□□□ 0.99
NCSTN-208ENST00000438008 ZNF287Q9HBT7 754 aa21.26■□□□□ 0.99
NCSTN-208ENST00000438008 CCDC85CA6NKD9 419 aa21.25■□□□□ 0.99
NCSTN-208ENST00000438008 RASA1P20936 1047 aa21.25■□□□□ 0.99
NCSTN-208ENST00000438008 CTGFP29279 349 aa21.25■□□□□ 0.99
NCSTN-208ENST00000438008 PSMC4P43686 418 aa21.25■□□□□ 0.99
NCSTN-208ENST00000438008 IRX3P78415 501 aaPredicted RBP21.25■□□□□ 0.99
NCSTN-208ENST00000438008 ALX1Q15699 326 aa21.25■□□□□ 0.99
NCSTN-208ENST00000438008 FAM110CQ1W6H9 321 aa21.25■□□□□ 0.99
NCSTN-208ENST00000438008 MKNK2Q9HBH9 465 aa21.25■□□□□ 0.99
NCSTN-208ENST00000438008 HIP1O00291 1037 aa21.24■□□□□ 0.99
NCSTN-208ENST00000438008 PRMT2P55345 433 aa21.24■□□□□ 0.99
NCSTN-208ENST00000438008 ICA1Q05084 483 aa21.24■□□□□ 0.99
NCSTN-208ENST00000438008 PPARAQ07869 468 aa21.24■□□□□ 0.99
NCSTN-208ENST00000438008 ZYXQ15942 572 aaKnown RBP21.24■□□□□ 0.99
NCSTN-208ENST00000438008 VPS53Q5VIR6 699 aa21.24■□□□□ 0.99
NCSTN-208ENST00000438008 TRIM47Q96LD4 638 aa21.24■□□□□ 0.99
NCSTN-208ENST00000438008 P2RX7Q99572 595 aaKnown RBP21.24■□□□□ 0.99
NCSTN-208ENST00000438008 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.24■□□□□ 0.99
NCSTN-208ENST00000438008 KANSL2Q9H9L4 492 aa21.24■□□□□ 0.99
NCSTN-208ENST00000438008 TMX2Q9Y320 296 aa21.24■□□□□ 0.99
NCSTN-208ENST00000438008 USP17L15C9J2P7 530 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 USP17L13C9JLJ4 530 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 USP17L11C9JVI0 530 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 USP17L18D6R9N7 530 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 USP17L22D6RA61 530 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 USP17L17D6RBQ6 530 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 USP17L19D6RCP7 530 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 USP17L20D6RJB6 530 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 VCAM1P19320 739 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 FCGRTP55899 365 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 USP17L24Q0WX57 530 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 TTC22Q5TAA0 569 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 ANKRD13CQ8N6S4 541 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 ARHGEF10LQ9HCE6 1279 aa21.23■□□□□ 0.99
NCSTN-208ENST00000438008 FMNL1O95466 1100 aaPredicted RBP21.22■□□□□ 0.99
NCSTN-208ENST00000438008 SLC3A2P08195 630 aaKnown RBP21.22■□□□□ 0.99
NCSTN-208ENST00000438008 GSPT1P15170 499 aaKnown RBP21.22■□□□□ 0.99
NCSTN-208ENST00000438008 HOXD10P28358 340 aa21.22■□□□□ 0.99
NCSTN-208ENST00000438008 HERVK_113P62684 666 aa21.22■□□□□ 0.99
NCSTN-208ENST00000438008 PDE4BQ07343 736 aa21.22■□□□□ 0.99
NCSTN-208ENST00000438008 CATSPERGQ6ZRH7 1159 aa21.22■□□□□ 0.99
NCSTN-208ENST00000438008 ZNF589Q86UQ0 364 aaPredicted RBP21.22■□□□□ 0.99
NCSTN-208ENST00000438008 GTF3C2Q8WUA4 911 aaPredicted RBP21.22■□□□□ 0.99
NCSTN-208ENST00000438008 SH2D4AQ9H788 454 aa21.22■□□□□ 0.99
NCSTN-208ENST00000438008 MORF4L1Q9UBU8 362 aa21.22■□□□□ 0.99
NCSTN-208ENST00000438008 ANAPC4Q9UJX5 808 aa21.22■□□□□ 0.99
NCSTN-208ENST00000438008 CCDC171Q6TFL3 1326 aa21.22■□□□□ 0.99
NCSTN-208ENST00000438008 HSPD1P10809 573 aaKnown RBP21.21■□□□□ 0.99
NCSTN-208ENST00000438008 MFAP1P55081 439 aaKnown RBP21.21■□□□□ 0.99
NCSTN-208ENST00000438008 CLEC10AQ8IUN9 316 aa21.21■□□□□ 0.99
NCSTN-208ENST00000438008 ZNF444Q8N0Y2 327 aaPredicted RBP21.21■□□□□ 0.99
NCSTN-208ENST00000438008 STK11IPQ8N1F8 1099 aa21.21■□□□□ 0.99
NCSTN-208ENST00000438008 LPAR1Q92633 364 aa21.21■□□□□ 0.99
NCSTN-208ENST00000438008 SRRDQ9UH36 339 aa21.21■□□□□ 0.99
NCSTN-208ENST00000438008 ZMYM6O95789 1325 aa21.21■□□□□ 0.99
NCSTN-208ENST00000438008 FGAP02671 866 aa21.2■□□□□ 0.98
NCSTN-208ENST00000438008 EEF2P13639 858 aaKnown RBP21.2■□□□□ 0.98
NCSTN-208ENST00000438008 RPAP3Q9H6T3 665 aaPredicted RBP21.2■□□□□ 0.98
NCSTN-208ENST00000438008 VCPKMTQ9H867 229 aa21.2■□□□□ 0.98
NCSTN-208ENST00000438008 DIAPH3Q9NSV4 1193 aa21.2■□□□□ 0.98
NCSTN-208ENST00000438008 PTCH2Q9Y6C5 1203 aa21.2■□□□□ 0.98
NCSTN-208ENST00000438008 IGKV6D-41A0A0C4DH26 115 aa21.19■□□□□ 0.98
NCSTN-208ENST00000438008 PRDM1O75626 825 aa21.19■□□□□ 0.98
NCSTN-208ENST00000438008 CWC27Q6UX04 472 aaKnown RBP21.19■□□□□ 0.98
NCSTN-208ENST00000438008 LBX2Q6XYB7 198 aa21.19■□□□□ 0.98
NCSTN-208ENST00000438008 CENPQQ7L2Z9 268 aaPredicted RBP21.19■□□□□ 0.98
NCSTN-208ENST00000438008 ARMC5Q96C12 935 aa21.19■□□□□ 0.98
NCSTN-208ENST00000438008 NYAP2Q9P242 653 aa21.19■□□□□ 0.98
NCSTN-208ENST00000438008 RBPJLQ9UBG7 517 aa21.19■□□□□ 0.98
NCSTN-208ENST00000438008 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.19■□□□□ 0.98
NCSTN-208ENST00000438008 MYH8P13535 1937 aa21.19■□□□□ 0.98
NCSTN-208ENST00000438008 ECM2O94769 699 aaPredicted RBP21.18■□□□□ 0.98
NCSTN-208ENST00000438008 KIAA1755Q5JYT7 1200 aa21.18■□□□□ 0.98
NCSTN-208ENST00000438008 POTEEQ6S8J3 1075 aa21.18■□□□□ 0.98
NCSTN-208ENST00000438008 GPRC5AQ8NFJ5 357 aa21.18■□□□□ 0.98
NCSTN-208ENST00000438008 TXNRD2Q9NNW7 524 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms