RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 FSD1Q9BTV5 496 aa13.09□□□□□ -0.31
HMGCL-204ENST00000436439 WDR18Q9BV38 432 aa13.09□□□□□ -0.31
HMGCL-204ENST00000436439 AS3MTQ9HBK9 375 aa13.09□□□□□ -0.31
HMGCL-204ENST00000436439 TAOK2Q9UL54 1235 aa13.09□□□□□ -0.31
HMGCL-204ENST00000436439 RAD50Q92878 1312 aa13.09□□□□□ -0.31
HMGCL-204ENST00000436439 GOLIM4O00461 696 aa13.08□□□□□ -0.31
HMGCL-204ENST00000436439 IGSF3O75054 1194 aa13.08□□□□□ -0.31
HMGCL-204ENST00000436439 REC8O95072 547 aa13.08□□□□□ -0.31
HMGCL-204ENST00000436439 SGPL1O95470 568 aa13.08□□□□□ -0.31
HMGCL-204ENST00000436439 ASNSP08243 561 aa13.08□□□□□ -0.31
HMGCL-204ENST00000436439 BACE1P56817 501 aa13.08□□□□□ -0.31
HMGCL-204ENST00000436439 FOXP4Q8IVH2 680 aaPredicted RBP13.08□□□□□ -0.31
HMGCL-204ENST00000436439 CRACR2BQ8N4Y2 399 aaPredicted RBP13.08□□□□□ -0.31
HMGCL-204ENST00000436439 MAGEB6Q8N7X4 407 aa13.08□□□□□ -0.31
HMGCL-204ENST00000436439 COA7Q96BR5 231 aa13.08□□□□□ -0.31
HMGCL-204ENST00000436439 EDC3Q96F86 508 aaKnown RBP13.08□□□□□ -0.31
HMGCL-204ENST00000436439 SGSM2O43147 1006 aa13.07□□□□□ -0.32
HMGCL-204ENST00000436439 ZFYP08048 801 aaPredicted RBP13.07□□□□□ -0.32
HMGCL-204ENST00000436439 GCLCP48506 637 aaPredicted RBP13.07□□□□□ -0.32
HMGCL-204ENST00000436439 FXR1P51114 621 aaKnown RBP eCLIP13.07□□□□□ -0.32
HMGCL-204ENST00000436439 PABPC4Q13310 644 aaKnown RBP eCLIP13.07□□□□□ -0.323e-6■■■□□ 15.2
HMGCL-204ENST00000436439 DPF3Q92784 378 aa13.07□□□□□ -0.32
HMGCL-204ENST00000436439 P2RX7Q99572 595 aaKnown RBP13.07□□□□□ -0.32
HMGCL-204ENST00000436439 DIAPH3Q9NSV4 1193 aa13.07□□□□□ -0.32
HMGCL-204ENST00000436439 GJD2Q9UKL4 321 aa13.07□□□□□ -0.32
HMGCL-204ENST00000436439 ZBTB21Q9ULJ3 1066 aa13.07□□□□□ -0.32
HMGCL-204ENST00000436439 HOXA7P31268 230 aaPredicted RBP13.07□□□□□ -0.32
HMGCL-204ENST00000436439 MFAP1P55081 439 aaKnown RBP13.07□□□□□ -0.32
HMGCL-204ENST00000436439 TRIM32Q13049 653 aa13.07□□□□□ -0.32
HMGCL-204ENST00000436439 POTEEQ6S8J3 1075 aa13.07□□□□□ -0.32
HMGCL-204ENST00000436439 TBC1D32Q96NH3 1257 aa13.07□□□□□ -0.32
HMGCL-204ENST00000436439 DEFB118Q96PH6 123 aa13.07□□□□□ -0.32
HMGCL-204ENST00000436439 TXNRD2Q9NNW7 524 aa13.07□□□□□ -0.32
HMGCL-204ENST00000436439 PAK6Q9NQU5 681 aaPredicted RBP13.07□□□□□ -0.32
HMGCL-204ENST00000436439 MORF4L1Q9UBU8 362 aa13.07□□□□□ -0.32
HMGCL-204ENST00000436439 MYH8P13535 1937 aa13.06□□□□□ -0.32
HMGCL-204ENST00000436439 USP17L10C9JJH3 530 aa13.06□□□□□ -0.32
HMGCL-204ENST00000436439 FARP2O94887 1054 aaPredicted RBP13.06□□□□□ -0.32
HMGCL-204ENST00000436439 HLA-DOAP06340 250 aa13.06□□□□□ -0.32
HMGCL-204ENST00000436439 USP5P45974 858 aa13.06□□□□□ -0.32
HMGCL-204ENST00000436439 RBM25P49756 843 aaKnown RBP13.06□□□□□ -0.32
HMGCL-204ENST00000436439 IRX3P78415 501 aaPredicted RBP13.06□□□□□ -0.32
HMGCL-204ENST00000436439 TMED8Q6PL24 325 aaPredicted RBP13.06□□□□□ -0.32
HMGCL-204ENST00000436439 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
HMGCL-204ENST00000436439 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.06□□□□□ -0.32
HMGCL-204ENST00000436439 EMILIN3Q9NT22 766 aa13.06□□□□□ -0.32
HMGCL-204ENST00000436439 TMOD4Q9NZQ9 345 aa13.06□□□□□ -0.32
HMGCL-204ENST00000436439 FRMPD3Q5JV73 1810 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 C19orf81C9J6K1 198 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 RNF113AO15541 343 aaKnown RBP13.05□□□□□ -0.32
HMGCL-204ENST00000436439 GH2P01242 217 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 HERVK_113P62684 666 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 EVX2Q03828 476 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 Q3C1V9 767 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 ZSCAN25Q6NSZ9 544 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 TATDN1Q6P1N9 297 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 CWC27Q6UX04 472 aaKnown RBP13.05□□□□□ -0.32
HMGCL-204ENST00000436439 CHRDL2Q6WN34 429 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 RIOK1Q9BRS2 568 aaKnown RBP13.05□□□□□ -0.32
HMGCL-204ENST00000436439 USP26Q9BXU7 913 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 CRISPLD2Q9H0B8 497 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.05□□□□□ -0.32
HMGCL-204ENST00000436439 HELLSQ9NRZ9 838 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 GINM1Q9NU53 330 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 RBPJLQ9UBG7 517 aa13.05□□□□□ -0.32
HMGCL-204ENST00000436439 BAZ2AQ9UIF9 1905 aaKnown RBP13.04□□□□□ -0.32
HMGCL-204ENST00000436439 TFRCP02786 760 aaKnown RBP13.04□□□□□ -0.32
HMGCL-204ENST00000436439 PLCD1P51178 756 aa13.04□□□□□ -0.32
HMGCL-204ENST00000436439 MAP3K12Q12852 859 aa13.04□□□□□ -0.32
HMGCL-204ENST00000436439 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
HMGCL-204ENST00000436439 ZYXQ15942 572 aaKnown RBP13.04□□□□□ -0.32
HMGCL-204ENST00000436439 ZMYM1Q5SVZ6 1142 aa13.04□□□□□ -0.32
HMGCL-204ENST00000436439 DIS3LQ8TF46 1054 aaKnown RBP13.04□□□□□ -0.32
HMGCL-204ENST00000436439 TRIB2Q92519 343 aa13.04□□□□□ -0.32
HMGCL-204ENST00000436439 FAM227BQ96M60 508 aa13.04□□□□□ -0.32
HMGCL-204ENST00000436439 HTATIP2Q9BUP3 242 aa13.04□□□□□ -0.32
HMGCL-204ENST00000436439 C22orf23Q9BZE7 217 aa13.04□□□□□ -0.32
HMGCL-204ENST00000436439 IL25Q9H293 177 aa13.04□□□□□ -0.32
HMGCL-204ENST00000436439 A0A0D9SFI3 127 aa13.03□□□□□ -0.32
HMGCL-204ENST00000436439 HMGCRP04035 888 aa13.03□□□□□ -0.32
HMGCL-204ENST00000436439 CYP2B6P20813 491 aa13.03□□□□□ -0.32
HMGCL-204ENST00000436439 ADD2P35612 726 aa13.03□□□□□ -0.32
HMGCL-204ENST00000436439 UBE3CQ15386 1083 aa13.03□□□□□ -0.32
HMGCL-204ENST00000436439 MCMDC2Q4G0Z9 681 aa13.03□□□□□ -0.32
HMGCL-204ENST00000436439 EHD4Q9H223 541 aa13.03□□□□□ -0.32
HMGCL-204ENST00000436439 PORCNQ9H237 461 aa13.03□□□□□ -0.32
HMGCL-204ENST00000436439 RBM27Q9P2N5 1060 aaKnown RBP13.03□□□□□ -0.32
HMGCL-204ENST00000436439 SERPINB13Q9UIV8 391 aa13.03□□□□□ -0.32
HMGCL-204ENST00000436439 RLFQ13129 1914 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 PDE6AP16499 860 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 GUCY1A2P33402 732 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 SHMT1P34896 483 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 ERVK-9P63128 1117 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 ERVK-24P63145 666 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 USP17L2Q6R6M4 530 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 CERS3Q8IU89 383 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 GPRC5AQ8NFJ5 357 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 ACER1Q8TDN7 264 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 APPBP2Q92624 585 aa13.02□□□□□ -0.33
HMGCL-204ENST00000436439 PAWRQ96IZ0 340 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms