RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 USP17L19D6RCP7 530 aa16.3■□□□□ 0.2
CDC42EP1-204ENST00000434728 USP17L20D6RJB6 530 aa16.3■□□□□ 0.2
CDC42EP1-204ENST00000434728 BMP8BP34820 402 aa16.3■□□□□ 0.2
CDC42EP1-204ENST00000434728 MAGEA10P43363 369 aaPredicted RBP16.3■□□□□ 0.2
CDC42EP1-204ENST00000434728 CACNB2Q08289 660 aaPredicted RBP16.3■□□□□ 0.2
CDC42EP1-204ENST00000434728 USP17L24Q0WX57 530 aa16.3■□□□□ 0.2
CDC42EP1-204ENST00000434728 CERKLQ49MI3 558 aaPredicted RBP16.3■□□□□ 0.2
CDC42EP1-204ENST00000434728 MAP3K21Q5TCX8 1036 aa16.3■□□□□ 0.2
CDC42EP1-204ENST00000434728 MFSD14CQ5VZR4 134 aa16.3■□□□□ 0.2
CDC42EP1-204ENST00000434728 GDF15Q99988 308 aa16.3■□□□□ 0.2
CDC42EP1-204ENST00000434728 UBE2OQ9C0C9 1292 aaKnown RBP16.3■□□□□ 0.2
CDC42EP1-204ENST00000434728 EMILIN3Q9NT22 766 aa16.3■□□□□ 0.2
CDC42EP1-204ENST00000434728 RABGAP1Q9Y3P9 1069 aa16.3■□□□□ 0.2
CDC42EP1-204ENST00000434728 CCL14Q16627 93 aa16.29■□□□□ 0.2
CDC42EP1-204ENST00000434728 ABCB5Q2M3G0 1257 aa16.29■□□□□ 0.2
CDC42EP1-204ENST00000434728 Q3C1V9 767 aa16.29■□□□□ 0.2
CDC42EP1-204ENST00000434728 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
CDC42EP1-204ENST00000434728 NDUFB9Q9Y6M9 179 aa16.29■□□□□ 0.2
CDC42EP1-204ENST00000434728 POLR3DP05423 398 aaPredicted RBP16.28■□□□□ 0.2
CDC42EP1-204ENST00000434728 CNGA1P29973 690 aa16.28■□□□□ 0.2
CDC42EP1-204ENST00000434728 CCND3P30281 292 aaPredicted RBP16.28■□□□□ 0.2
CDC42EP1-204ENST00000434728 MAP2K5Q13163 448 aa16.28■□□□□ 0.2
CDC42EP1-204ENST00000434728 MORN1Q5T089 497 aa16.28■□□□□ 0.2
CDC42EP1-204ENST00000434728 AACSQ86V21 672 aa16.28■□□□□ 0.2
CDC42EP1-204ENST00000434728 TDHQ8IZJ6 230 aa16.28■□□□□ 0.2
CDC42EP1-204ENST00000434728 DEFB123Q8N688 67 aa16.28■□□□□ 0.2
CDC42EP1-204ENST00000434728 EDC3Q96F86 508 aaKnown RBP16.28■□□□□ 0.2
CDC42EP1-204ENST00000434728 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
CDC42EP1-204ENST00000434728 EHD4Q9H223 541 aa16.28■□□□□ 0.2
CDC42EP1-204ENST00000434728 NOP58Q9Y2X3 529 aaKnown RBP16.28■□□□□ 0.2
CDC42EP1-204ENST00000434728 PFASO15067 1338 aa16.27■□□□□ 0.2
CDC42EP1-204ENST00000434728 MPHOSPH10O00566 681 aaKnown RBP16.27■□□□□ 0.2
CDC42EP1-204ENST00000434728 VCAM1P19320 739 aa16.27■□□□□ 0.2
CDC42EP1-204ENST00000434728 ATP2B2Q01814 1243 aa16.27■□□□□ 0.2
CDC42EP1-204ENST00000434728 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.2
CDC42EP1-204ENST00000434728 EAF2Q96CJ1 260 aaPredicted RBP16.27■□□□□ 0.2
CDC42EP1-204ENST00000434728 C12orf42Q96LP6 360 aa16.27■□□□□ 0.2
CDC42EP1-204ENST00000434728 COL6A3P12111 3177 aa16.26■□□□□ 0.19
CDC42EP1-204ENST00000434728 MNX1P50219 401 aaPredicted RBP16.26■□□□□ 0.19
CDC42EP1-204ENST00000434728 HNRNPUQ00839 825 aaKnown RBP eCLIP16.26■□□□□ 0.19
CDC42EP1-204ENST00000434728 TTF1Q15361 905 aaPredicted RBP16.26■□□□□ 0.19
CDC42EP1-204ENST00000434728 TATDN1Q6P1N9 297 aa16.26■□□□□ 0.19
CDC42EP1-204ENST00000434728 USP6NLQ92738 828 aa16.26■□□□□ 0.19
CDC42EP1-204ENST00000434728 CRNKL1Q9BZJ0 848 aaKnown RBP16.26■□□□□ 0.19
CDC42EP1-204ENST00000434728 KIAA1683Q9H0B3 1180 aa16.26■□□□□ 0.19
CDC42EP1-204ENST00000434728 RPAP3Q9H6T3 665 aaPredicted RBP16.26■□□□□ 0.19
CDC42EP1-204ENST00000434728 EXOC6BQ9Y2D4 811 aa16.26■□□□□ 0.19
CDC42EP1-204ENST00000434728 NAV1Q8NEY1 1877 aa16.26■□□□□ 0.19
CDC42EP1-204ENST00000434728 MAGEB6P1A0A0J9YX57 407 aa16.25■□□□□ 0.19
CDC42EP1-204ENST00000434728 SLC15A5A6NIM6 579 aa16.25■□□□□ 0.19
CDC42EP1-204ENST00000434728 DLL1O00548 723 aa16.25■□□□□ 0.19
CDC42EP1-204ENST00000434728 MSCO60682 206 aa16.25■□□□□ 0.19
CDC42EP1-204ENST00000434728 HSP90AB4PQ58FF6 505 aa16.25■□□□□ 0.19
CDC42EP1-204ENST00000434728 GPR153Q6NV75 609 aa16.25■□□□□ 0.19
CDC42EP1-204ENST00000434728 CATSPERGQ6ZRH7 1159 aa16.25■□□□□ 0.19
CDC42EP1-204ENST00000434728 LBHD1Q9BQE6 289 aaPredicted RBP16.25■□□□□ 0.19
CDC42EP1-204ENST00000434728 TANGO6Q9C0B7 1094 aa16.25■□□□□ 0.19
CDC42EP1-204ENST00000434728 ANTXR1Q9H6X2 564 aa16.25■□□□□ 0.19
CDC42EP1-204ENST00000434728 PRKAG2Q9UGJ0 569 aa16.25■□□□□ 0.19
CDC42EP1-204ENST00000434728 FRMPD3Q5JV73 1810 aa16.24■□□□□ 0.19
CDC42EP1-204ENST00000434728 A0A0C4DFX4 3053 aa16.24■□□□□ 0.19
CDC42EP1-204ENST00000434728 MDM2Q00987 491 aaPredicted RBP16.24■□□□□ 0.19
CDC42EP1-204ENST00000434728 LRRC26Q2I0M4 334 aa16.24■□□□□ 0.19
CDC42EP1-204ENST00000434728 LRIT3Q3SXY7 679 aa16.24■□□□□ 0.19
CDC42EP1-204ENST00000434728 DPP9Q86TI2 863 aa16.24■□□□□ 0.19
CDC42EP1-204ENST00000434728 ACER1Q8TDN7 264 aa16.24■□□□□ 0.19
CDC42EP1-204ENST00000434728 SENP6Q9GZR1 1112 aaPredicted RBP16.24■□□□□ 0.19
CDC42EP1-204ENST00000434728 MCM9Q9NXL9 1143 aa16.24■□□□□ 0.19
CDC42EP1-204ENST00000434728 CUL9Q8IWT3 2517 aa16.23■□□□□ 0.19
CDC42EP1-204ENST00000434728 DNAH12Q6ZR08 3092 aa16.23■□□□□ 0.19
CDC42EP1-204ENST00000434728 APBB1O00213 710 aa16.23■□□□□ 0.19
CDC42EP1-204ENST00000434728 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
CDC42EP1-204ENST00000434728 PTPREP23469 700 aa16.23■□□□□ 0.19
CDC42EP1-204ENST00000434728 SLC9C2Q5TAH2 1124 aa16.23■□□□□ 0.19
CDC42EP1-204ENST00000434728 LHX8Q68G74 356 aa16.23■□□□□ 0.19
CDC42EP1-204ENST00000434728 CEP85Q6P2H3 762 aa16.23■□□□□ 0.19
CDC42EP1-204ENST00000434728 Q7L0L9 218 aa16.23■□□□□ 0.19
CDC42EP1-204ENST00000434728 IL1RAPL2Q9NP60 686 aa16.23■□□□□ 0.19
CDC42EP1-204ENST00000434728 DDX20Q9UHI6 824 aaKnown RBP16.23■□□□□ 0.19
CDC42EP1-204ENST00000434728 GTF3C3Q9Y5Q9 886 aa16.23■□□□□ 0.19
CDC42EP1-204ENST00000434728 MYH8P13535 1937 aa16.22■□□□□ 0.19
CDC42EP1-204ENST00000434728 SPDYE16A6NNV3 312 aaPredicted RBP16.22■□□□□ 0.19
CDC42EP1-204ENST00000434728 CNMDO75829 334 aa16.22■□□□□ 0.19
CDC42EP1-204ENST00000434728 COL6A1P12109 1028 aa16.22■□□□□ 0.19
CDC42EP1-204ENST00000434728 RLBP1P12271 317 aa16.22■□□□□ 0.19
CDC42EP1-204ENST00000434728 SHMT1P34896 483 aa16.22■□□□□ 0.19
CDC42EP1-204ENST00000434728 PLCD1P51178 756 aa16.22■□□□□ 0.19
CDC42EP1-204ENST00000434728 PLS1Q14651 629 aa16.22■□□□□ 0.19
CDC42EP1-204ENST00000434728 SEPT2Q15019 361 aa16.22■□□□□ 0.19
CDC42EP1-204ENST00000434728 SAMD1Q6SPF0 538 aaPredicted RBP16.22■□□□□ 0.19
CDC42EP1-204ENST00000434728 DNAJC2Q99543 621 aaKnown RBP16.22■□□□□ 0.19
CDC42EP1-204ENST00000434728 BTBD7Q9P203 1132 aa16.22■□□□□ 0.19
CDC42EP1-204ENST00000434728 IFIT2P09913 472 aaKnown RBP16.21■□□□□ 0.19
CDC42EP1-204ENST00000434728 CYP2C19P33261 490 aa16.21■□□□□ 0.19
CDC42EP1-204ENST00000434728 ATN1P54259 1190 aaPredicted RBP16.21■□□□□ 0.19
CDC42EP1-204ENST00000434728 GRB14Q14449 540 aa16.21■□□□□ 0.19
CDC42EP1-204ENST00000434728 POTEEQ6S8J3 1075 aa16.21■□□□□ 0.19
CDC42EP1-204ENST00000434728 LBX2Q6XYB7 198 aa16.21■□□□□ 0.19
CDC42EP1-204ENST00000434728 AMOTL1Q8IY63 956 aa16.21■□□□□ 0.19
CDC42EP1-204ENST00000434728 CLASRPQ8N2M8 674 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms