RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 RASSF7Q02833 373 aa13.13□□□□□ -0.31
LINC01090-202ENST00000434418 PDE12Q6L8Q7 609 aaKnown RBP13.13□□□□□ -0.31
LINC01090-202ENST00000434418 C2CD5Q86YS7 1000 aa13.13□□□□□ -0.31
LINC01090-202ENST00000434418 NEDD1Q8NHV4 660 aa13.13□□□□□ -0.31
LINC01090-202ENST00000434418 TLR7Q9NYK1 1049 aaKnown RBP13.13□□□□□ -0.31
LINC01090-202ENST00000434418 RNF181Q9P0P0 153 aa13.13□□□□□ -0.31
LINC01090-202ENST00000434418 SLC6A14Q9UN76 642 aa13.13□□□□□ -0.31
LINC01090-202ENST00000434418 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
LINC01090-202ENST00000434418 SBF1O95248 1867 aa13.12□□□□□ -0.31
LINC01090-202ENST00000434418 CYP2E1P05181 493 aaPredicted RBP13.12□□□□□ -0.31
LINC01090-202ENST00000434418 IL6STP40189 918 aaPredicted RBP13.12□□□□□ -0.31
LINC01090-202ENST00000434418 CHSY3Q70JA7 882 aa13.12□□□□□ -0.31
LINC01090-202ENST00000434418 BTBD6Q96KE9 485 aa13.12□□□□□ -0.31
LINC01090-202ENST00000434418 NSUN5Q96P11 429 aaKnown RBP13.12□□□□□ -0.31
LINC01090-202ENST00000434418 ABI2Q9NYB9 513 aaPredicted RBP13.12□□□□□ -0.31
LINC01090-202ENST00000434418 CAMTA2O94983 1202 aa13.11□□□□□ -0.31
LINC01090-202ENST00000434418 RPLP1P05386 114 aaKnown RBP13.11□□□□□ -0.31
LINC01090-202ENST00000434418 AMPD1P23109 780 aa13.11□□□□□ -0.31
LINC01090-202ENST00000434418 NPM2Q86SE8 214 aaKnown RBP13.11□□□□□ -0.31
LINC01090-202ENST00000434418 TTC16Q8NEE8 873 aa13.11□□□□□ -0.31
LINC01090-202ENST00000434418 MIS18AQ9NYP9 233 aa13.11□□□□□ -0.31
LINC01090-202ENST00000434418 CNTN3Q9P232 1028 aa13.11□□□□□ -0.31
LINC01090-202ENST00000434418 STARD13Q9Y3M8 1113 aa13.11□□□□□ -0.31
LINC01090-202ENST00000434418 CEP350Q5VT06 3117 aa13.1□□□□□ -0.31
LINC01090-202ENST00000434418 PSAPP07602 524 aa13.1□□□□□ -0.31
LINC01090-202ENST00000434418 HSPA6P17066 643 aa13.1□□□□□ -0.31
LINC01090-202ENST00000434418 USP5P45974 858 aa13.1□□□□□ -0.31
LINC01090-202ENST00000434418 PRR5LQ6MZQ0 368 aa13.1□□□□□ -0.31
LINC01090-202ENST00000434418 HFE2Q6ZVN8 426 aa13.1□□□□□ -0.31
LINC01090-202ENST00000434418 FOXD3Q9UJU5 478 aaPredicted RBP13.1□□□□□ -0.31
LINC01090-202ENST00000434418 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
LINC01090-202ENST00000434418 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.1□□□□□ -0.31
LINC01090-202ENST00000434418 CACNA1SQ13698 1873 aa13.1□□□□□ -0.31
LINC01090-202ENST00000434418 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
LINC01090-202ENST00000434418 H0YIN7 160 aa13.09□□□□□ -0.31
LINC01090-202ENST00000434418 NPHP1O15259 732 aa13.09□□□□□ -0.31
LINC01090-202ENST00000434418 SNRPA1P09661 255 aaKnown RBP13.09□□□□□ -0.31
LINC01090-202ENST00000434418 HOXB4P17483 251 aaPredicted RBP13.09□□□□□ -0.31
LINC01090-202ENST00000434418 GPLD1P80108 840 aa13.09□□□□□ -0.31
LINC01090-202ENST00000434418 COL13A1Q5TAT6 717 aaPredicted RBP13.09□□□□□ -0.31
LINC01090-202ENST00000434418 TTC39BQ5VTQ0 682 aaPredicted RBP13.09□□□□□ -0.31
LINC01090-202ENST00000434418 TIAM2Q8IVF5 1701 aa13.09□□□□□ -0.31
LINC01090-202ENST00000434418 TTLL6Q8N841 843 aa13.09□□□□□ -0.31
LINC01090-202ENST00000434418 OR13H1Q8NG92 308 aa13.09□□□□□ -0.31
LINC01090-202ENST00000434418 TRPM4Q8TD43 1214 aa13.09□□□□□ -0.31
LINC01090-202ENST00000434418 THUMPD2Q9BTF0 503 aaKnown RBP13.09□□□□□ -0.31
LINC01090-202ENST00000434418 KDM3BQ7LBC6 1761 aa13.09□□□□□ -0.31
LINC01090-202ENST00000434418 ALBP02768 609 aa13.08□□□□□ -0.32
LINC01090-202ENST00000434418 NEFMP07197 916 aa13.08□□□□□ -0.32
LINC01090-202ENST00000434418 CPB1P15086 417 aa13.08□□□□□ -0.32
LINC01090-202ENST00000434418 PRELPP51888 382 aa13.08□□□□□ -0.32
LINC01090-202ENST00000434418 SNRPNP63162 240 aaKnown RBP13.08□□□□□ -0.32
LINC01090-202ENST00000434418 XKR5Q6UX68 686 aa13.08□□□□□ -0.32
LINC01090-202ENST00000434418 C1orf127Q8N9H9 656 aa13.08□□□□□ -0.32
LINC01090-202ENST00000434418 CNBD1Q8NA66 436 aa13.08□□□□□ -0.32
LINC01090-202ENST00000434418 ZNF622Q969S3 477 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC01090-202ENST00000434418 SETDB2Q96T68 719 aa13.08□□□□□ -0.32
LINC01090-202ENST00000434418 FAM129BQ96TA1 746 aa13.08□□□□□ -0.32
LINC01090-202ENST00000434418 ENAMQ9NRM1 1142 aa13.08□□□□□ -0.32
LINC01090-202ENST00000434418 KANSL3Q9P2N6 904 aa13.08□□□□□ -0.32
LINC01090-202ENST00000434418 DCTN4Q9UJW0 460 aa13.08□□□□□ -0.32
LINC01090-202ENST00000434418 CCDC88AQ3V6T2 1871 aa13.08□□□□□ -0.32
LINC01090-202ENST00000434418 J3QW42 95 aa13.07□□□□□ -0.32
LINC01090-202ENST00000434418 GPR182O15218 404 aa13.07□□□□□ -0.32
LINC01090-202ENST00000434418 HTATSF1O43719 755 aaKnown RBP13.07□□□□□ -0.32
LINC01090-202ENST00000434418 TNFRSF21O75509 655 aa13.07□□□□□ -0.32
LINC01090-202ENST00000434418 IGHA2P01877 340 aa13.07□□□□□ -0.32
LINC01090-202ENST00000434418 ALAS2P22557 587 aa13.07□□□□□ -0.32
LINC01090-202ENST00000434418 MAPK1P28482 360 aa13.07□□□□□ -0.32
LINC01090-202ENST00000434418 NRLP54845 237 aa13.07□□□□□ -0.32
LINC01090-202ENST00000434418 PLAURQ03405 335 aa13.07□□□□□ -0.32
LINC01090-202ENST00000434418 TAF7Q15545 349 aaPredicted RBP13.07□□□□□ -0.32
LINC01090-202ENST00000434418 SND1Q7KZF4 910 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC01090-202ENST00000434418 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
LINC01090-202ENST00000434418 BRIP1Q9BX63 1249 aa13.07□□□□□ -0.32
LINC01090-202ENST00000434418 GZF1Q9H116 711 aaPredicted RBP13.07□□□□□ -0.32
LINC01090-202ENST00000434418 CHRDQ9H2X0 955 aa13.07□□□□□ -0.32
LINC01090-202ENST00000434418 RRAGCQ9HB90 399 aa13.07□□□□□ -0.32
LINC01090-202ENST00000434418 TNRC6CQ9HCJ0 1690 aaKnown RBP13.07□□□□□ -0.32
LINC01090-202ENST00000434418 NFKBIEO00221 500 aa13.06□□□□□ -0.32
LINC01090-202ENST00000434418 TOMM70O94826 608 aa13.06□□□□□ -0.32
LINC01090-202ENST00000434418 SOX18P35713 384 aa13.06□□□□□ -0.32
LINC01090-202ENST00000434418 PDE6BP35913 854 aa13.06□□□□□ -0.32
LINC01090-202ENST00000434418 FAM35AQ86V20 835 aa13.06□□□□□ -0.32
LINC01090-202ENST00000434418 KDM2BQ8NHM5 1336 aa13.06□□□□□ -0.32
LINC01090-202ENST00000434418 FAM177BA6PVY3 158 aa13.05□□□□□ -0.32
LINC01090-202ENST00000434418 LMNB1P20700 586 aa13.05□□□□□ -0.32
LINC01090-202ENST00000434418 ST5P78524 1137 aa13.05□□□□□ -0.32
LINC01090-202ENST00000434418 EHHADHQ08426 723 aa13.05□□□□□ -0.32
LINC01090-202ENST00000434418 NFE2L2Q16236 605 aa13.05□□□□□ -0.32
LINC01090-202ENST00000434418 C8orf86Q6ZUL3 223 aa13.05□□□□□ -0.32
LINC01090-202ENST00000434418 TMC7Q7Z402 723 aa13.05□□□□□ -0.32
LINC01090-202ENST00000434418 NBPF5PQ86XG9 351 aaPredicted RBP13.05□□□□□ -0.32
LINC01090-202ENST00000434418 C16orf71Q8IYS4 520 aaPredicted RBP13.05□□□□□ -0.32
LINC01090-202ENST00000434418 NGEFQ8N5V2 710 aa13.05□□□□□ -0.32
LINC01090-202ENST00000434418 RBCK1Q9BYM8 510 aa13.05□□□□□ -0.32
LINC01090-202ENST00000434418 STK17AQ9UEE5 414 aa13.05□□□□□ -0.32
LINC01090-202ENST00000434418 MAPK8IP3Q9UPT6 1336 aa13.05□□□□□ -0.32
LINC01090-202ENST00000434418 SLX4Q8IY92 1834 aa13.04□□□□□ -0.32
LINC01090-202ENST00000434418 HOXD8P13378 290 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms