RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 TUBE1Q9UJT0 475 aa13.91□□□□□ -0.18
SEMA3F-206ENST00000434342 NWD2Q9ULI1 1742 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 TMEM232C9JQI7 657 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 GNAT2P19087 354 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 MAP2K1Q02750 393 aaPredicted RBP13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 SMC1AQ14683 1233 aaKnown RBP13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 MICALL1Q8N3F8 863 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 CRACR2BQ8N4Y2 399 aaPredicted RBP13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 MAGEB6P1A0A0J9YX57 407 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 CCDC196A0A1B0GTZ2 297 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 H2AFXP16104 143 aaPredicted RBP13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 PDE6BP35913 854 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 MAGEA9P43362 315 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 PDE4BQ07343 736 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 TTC19Q6DKK2 380 aaPredicted RBP13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 GOLGA5Q8TBA6 731 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 RNF41Q9H4P4 317 aaPredicted RBP13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 FAM205CA6NFA0 338 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 IKBKBO14920 756 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 TOP1P11387 765 aaKnown RBP13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 DYNLL1P63167 89 aaKnown RBP13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 ITPK1Q13572 414 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 DHX8Q14562 1220 aaKnown RBP13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 STAG1Q8WVM7 1258 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 JAG2Q9Y219 1238 aa13.9□□□□□ -0.18
SEMA3F-206ENST00000434342 TNKSO95271 1327 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 NUTM2BA6NNL0 878 aaPredicted RBP13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 NUTM2EB1AL46 878 aaPredicted RBP13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 DEXIO95424 95 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 MCTP2Q6DN12 878 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 NUTM2AQ8IVF1 878 aaPredicted RBP13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 CCDC24Q8N4L8 307 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 PPP1R13BQ96KQ4 1090 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 HSD3B7Q9H2F3 369 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 HOOK1Q9UJC3 728 aaKnown RBP13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 ADAM21Q9UKJ8 722 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 UBR2Q8IWV8 1755 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 SASH3O75995 380 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 CAMTA2O94983 1202 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 BMP6P22004 513 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 RILPL1Q5EBL4 403 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 KLHL10Q6JEL2 608 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 REXO1L1PQ8IX06 675 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 UBXN4Q92575 508 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 ESR2Q92731 530 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 V9GY48 417 aaPredicted RBP13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 SPEF2Q9C093 1822 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 AFMP43652 599 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 PARP10Q53GL7 1025 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 TMTC2Q8N394 836 aa13.89□□□□□ -0.19
SEMA3F-206ENST00000434342 POSTNQ15063 836 aa13.88□□□□□ -0.19
SEMA3F-206ENST00000434342 HOMEZQ8IX15 550 aa13.88□□□□□ -0.19
SEMA3F-206ENST00000434342 SH3BP1Q9Y3L3 701 aa13.88□□□□□ -0.19
SEMA3F-206ENST00000434342 ATRNO75882 1429 aa13.88□□□□□ -0.19
SEMA3F-206ENST00000434342 CCDC189A1A4V9 331 aa13.88□□□□□ -0.19
SEMA3F-206ENST00000434342 CBFA2T2O43439 604 aa13.88□□□□□ -0.19
SEMA3F-206ENST00000434342 ANKRD18AQ8IVF6 992 aa13.88□□□□□ -0.19
SEMA3F-206ENST00000434342 DHX58Q96C10 678 aa13.88□□□□□ -0.19
SEMA3F-206ENST00000434342 CDC5LQ99459 802 aaKnown RBP13.88□□□□□ -0.19
SEMA3F-206ENST00000434342 SRRTQ9BXP5 876 aaKnown RBP13.88□□□□□ -0.19
SEMA3F-206ENST00000434342 GNL3LQ9NVN8 582 aaKnown RBP13.88□□□□□ -0.19
SEMA3F-206ENST00000434342 DNAI1Q9UI46 699 aa13.88□□□□□ -0.19
SEMA3F-206ENST00000434342 NFE2L3Q9Y4A8 694 aa13.88□□□□□ -0.19
SEMA3F-206ENST00000434342 KCNQ2O43526 872 aa13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 CSRNP2Q9H175 543 aa13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 ARGLU1Q9NWB6 273 aaPredicted RBP13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 PTPREP23469 700 aa13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 ACTN2P35609 894 aa13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 C3orf67Q6ZVT6 689 aa13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 MAN1B1Q9UKM7 699 aa13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 NTSR2O95665 410 aa13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 CASP1P29466 404 aa13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 ERFEQ4G0M1 354 aa13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 CAVIN4Q5BKX8 364 aa13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 IFIT1BQ5T764 474 aaKnown RBP13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 VPS18Q9P253 973 aa13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 FBXO2Q9UK22 296 aaPredicted RBP13.87□□□□□ -0.19
SEMA3F-206ENST00000434342 PHACTR2O75167 634 aa13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 STAMQ92783 540 aa13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 FOXP1Q9H334 677 aaPredicted RBP13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 PNPLA7Q6ZV29 1317 aa13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 STK36Q9NRP7 1315 aa13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 PLEKHA8P1O95397 391 aa13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 XBP1P17861 261 aa13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 STX17P56962 302 aa13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 FMR1Q06787 632 aaKnown RBP eCLIP13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 EPSTI1Q96J88 318 aa13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 USP17L12C9JPN9 530 aa13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 USP17L21D6R901 530 aa13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 EVX2Q03828 476 aa13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 CATIPQ7Z7H3 387 aa13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 ENAHQ8N8S7 591 aaPredicted RBP13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 MARCH10Q8NA82 808 aaPredicted RBP13.86□□□□□ -0.19
SEMA3F-206ENST00000434342 AKAP11Q9UKA4 1901 aa13.85□□□□□ -0.19
SEMA3F-206ENST00000434342 TOGARAM1Q9Y4F4 1720 aa13.85□□□□□ -0.19
SEMA3F-206ENST00000434342 TRIM75PA6NK02 468 aa13.85□□□□□ -0.19
SEMA3F-206ENST00000434342 ADKP55263 362 aaKnown RBP13.85□□□□□ -0.19
SEMA3F-206ENST00000434342 ZNF174Q15697 407 aa13.85□□□□□ -0.19
SEMA3F-206ENST00000434342 IQCA1Q86XH1 822 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms