RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 STRN4Q9NRL3 753 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 RCOR1Q9UKL0 485 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 ASAP1Q9ULH1 1129 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 TAF6LQ9Y6J9 622 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 MROH5Q6ZUA9 1318 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 PCNTO95613 3336 aa8.71□□□□□ -1.02
COL17A1-204ENST00000433822 EXOC5O00471 708 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 FOXK2Q01167 660 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 MAP3K11Q16584 847 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 ATP2B3Q16720 1220 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 PARP10Q53GL7 1025 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 TAF7LQ5H9L4 462 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 GPAT2Q6NUI2 795 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 PDXDC2PQ6P474 469 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 FAM196AQ6ZSG2 479 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 FAM200AQ8TCP9 573 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 WHAMMQ8TF30 809 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 BRF1Q92994 677 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 OSBP2Q969R2 916 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 SCARF2Q96GP6 870 aaPredicted RBP8.7□□□□□ -1.02
COL17A1-204ENST00000433822 SPATA32Q96LK8 384 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 ZNF396Q96N95 335 aaPredicted RBP8.7□□□□□ -1.02
COL17A1-204ENST00000433822 KCTD15Q96SI1 283 aaPredicted RBP8.7□□□□□ -1.02
COL17A1-204ENST00000433822 SEC62Q99442 399 aaKnown RBP8.7□□□□□ -1.02
COL17A1-204ENST00000433822 NUP62CLQ9H1M0 184 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 CLSTN2Q9H4D0 955 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 TIAM2Q8IVF5 1701 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 DOT1LQ8TEK3 1739 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 NID2Q14112 1375 aa8.7□□□□□ -1.02
COL17A1-204ENST00000433822 H3BQV1 296 aa8.69□□□□□ -1.02
COL17A1-204ENST00000433822 FOXP2O15409 715 aa8.69□□□□□ -1.02
COL17A1-204ENST00000433822 PDE8BO95263 885 aa8.69□□□□□ -1.02
COL17A1-204ENST00000433822 FGFR2P21802 821 aa8.69□□□□□ -1.02
COL17A1-204ENST00000433822 PDIA3P30101 505 aaKnown RBP8.69□□□□□ -1.02
COL17A1-204ENST00000433822 ADD2P35612 726 aa8.69□□□□□ -1.02
COL17A1-204ENST00000433822 RCAN1P53805 252 aa8.69□□□□□ -1.02
COL17A1-204ENST00000433822 EIF5P55010 431 aaKnown RBP8.69□□□□□ -1.02
COL17A1-204ENST00000433822 PUM3Q15397 648 aaKnown RBP8.69□□□□□ -1.02
COL17A1-204ENST00000433822 GORABQ5T7V8 394 aa8.69□□□□□ -1.02
COL17A1-204ENST00000433822 LDHAL6AQ6ZMR3 332 aa8.69□□□□□ -1.02
COL17A1-204ENST00000433822 CCDC129Q6ZRS4 1044 aa8.69□□□□□ -1.02
COL17A1-204ENST00000433822 MB21D2Q8IYB1 491 aaPredicted RBP8.69□□□□□ -1.02
COL17A1-204ENST00000433822 NCOA7Q8NI08 942 aa8.69□□□□□ -1.02
COL17A1-204ENST00000433822 JARID2Q92833 1246 aaPredicted RBP8.69□□□□□ -1.02
COL17A1-204ENST00000433822 SLC10A4Q96EP9 437 aa8.69□□□□□ -1.02
COL17A1-204ENST00000433822 ARHGAP9Q9BRR9 750 aa8.69□□□□□ -1.02
COL17A1-204ENST00000433822 PUS3Q9BZE2 481 aaKnown RBP8.69□□□□□ -1.02
COL17A1-204ENST00000433822 BCORQ6W2J9 1755 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 PTPDC1A2A3K4 754 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 GOLGA6L4A6NEF3 574 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 GOLGA6L6A8MZA4 724 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 M0R2C6 588 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 IRS4O14654 1257 aaPredicted RBP8.68□□□□□ -1.02
COL17A1-204ENST00000433822 CTDNEP1O95476 244 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 YEATS4O95619 227 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 ADD1P35611 737 aaKnown RBP8.68□□□□□ -1.02
COL17A1-204ENST00000433822 CTSOP43234 321 aaPredicted RBP8.68□□□□□ -1.02
COL17A1-204ENST00000433822 FGD1P98174 961 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 METTL24Q5JXM2 366 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 PTF1AQ7RTS3 328 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 BRAPQ7Z569 592 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.68□□□□□ -1.02
COL17A1-204ENST00000433822 LPIN2Q92539 896 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 ZNF594Q96JF6 807 aaPredicted RBP8.68□□□□□ -1.02
COL17A1-204ENST00000433822 TMEM87BQ96K49 555 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 SPATA31A1Q5TZJ5 1347 aa8.68□□□□□ -1.02
COL17A1-204ENST00000433822 COL5A3P25940 1745 aaPredicted RBP8.68□□□□□ -1.02
COL17A1-204ENST00000433822 A0A1W2PQ27 194 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 A0A1W2PQ64 194 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 A0A1W2PQD8 194 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 GPAA1O43292 621 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 JAK2O60674 1132 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 FGAP02671 866 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 HCLS1P14317 486 aaPredicted RBP8.67□□□□□ -1.02
COL17A1-204ENST00000433822 ADORA1P30542 326 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 ZAP70P43403 619 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 NT5C2P49902 561 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 TYRO3Q06418 890 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 COL9A3Q14050 684 aaPredicted RBP8.67□□□□□ -1.02
COL17A1-204ENST00000433822 RALYLQ86SE5 291 aaKnown RBP8.67□□□□□ -1.02
COL17A1-204ENST00000433822 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
COL17A1-204ENST00000433822 SMARCC1Q92922 1105 aaPredicted RBP8.67□□□□□ -1.02
COL17A1-204ENST00000433822 FAM89AQ96GI7 184 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 TCEANC2Q96MN5 208 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 SLC4A9Q96Q91 983 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 INSM2Q96T92 566 aaPredicted RBP8.67□□□□□ -1.02
COL17A1-204ENST00000433822 TNMDQ9H2S6 317 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 RTEL1Q9NZ71 1219 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 TBC1D2BQ9UPU7 963 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 ZBTB1Q9Y2K1 713 aa8.67□□□□□ -1.02
COL17A1-204ENST00000433822 C4AP0C0L4 1744 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 C4BP0C0L5 1744 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 PNPLA7Q6ZV29 1317 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 STK36Q9NRP7 1315 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 ZNF213O14771 459 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 CDKL5O76039 1030 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 SLC5A1P13866 664 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 HSPA6P17066 643 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 GNAT2P19087 354 aa8.66□□□□□ -1.02
COL17A1-204ENST00000433822 CDC25BP30305 580 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms