RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TSPY8P0CW00 308 aa22.6■■□□□ 1.21
VRK2-205ENST00000432057 BAG6P46379 1132 aa22.6■■□□□ 1.21
VRK2-205ENST00000432057 SLC39A14Q15043 492 aa22.6■■□□□ 1.21
VRK2-205ENST00000432057 UVSSAQ2YD98 709 aa22.6■■□□□ 1.21
VRK2-205ENST00000432057 DBNDD1Q9H9R9 158 aa22.6■■□□□ 1.21
VRK2-205ENST00000432057 A0A1B0GVL5 298 aa22.6■■□□□ 1.21
VRK2-205ENST00000432057 PTPAQ15257 358 aa22.6■■□□□ 1.21
VRK2-205ENST00000432057 C16orf86Q6ZW13 317 aa22.6■■□□□ 1.21
VRK2-205ENST00000432057 ZNF444Q8N0Y2 327 aaPredicted RBP22.6■■□□□ 1.21
VRK2-205ENST00000432057 SRBD1Q8N5C6 995 aaKnown RBP22.6■■□□□ 1.21
VRK2-205ENST00000432057 MAP3K14Q99558 947 aa22.6■■□□□ 1.21
VRK2-205ENST00000432057 VPS54Q9P1Q0 977 aa22.6■■□□□ 1.21
VRK2-205ENST00000432057 V9GY48 417 aaPredicted RBP22.6■■□□□ 1.21
VRK2-205ENST00000432057 KINO60870 393 aaKnown RBP22.59■■□□□ 1.21
VRK2-205ENST00000432057 MARCKSP29966 332 aaPredicted RBP22.59■■□□□ 1.21
VRK2-205ENST00000432057 NR5A1Q13285 461 aa22.59■■□□□ 1.21
VRK2-205ENST00000432057 AXDND1Q5T1B0 1012 aaPredicted RBP22.59■■□□□ 1.21
VRK2-205ENST00000432057 DGKHQ86XP1 1220 aa22.59■■□□□ 1.21
VRK2-205ENST00000432057 OXER1Q8TDS5 423 aa22.59■■□□□ 1.21
VRK2-205ENST00000432057 FOXP1Q9H334 677 aaPredicted RBP22.59■■□□□ 1.21
VRK2-205ENST00000432057 CDK8P49336 464 aa22.58■■□□□ 1.21
VRK2-205ENST00000432057 SCNN1DP51172 638 aa22.58■■□□□ 1.21
VRK2-205ENST00000432057 FMR1NBQ8N0W7 255 aaPredicted RBP22.58■■□□□ 1.21
VRK2-205ENST00000432057 PNMA1Q8ND90 353 aa22.58■■□□□ 1.21
VRK2-205ENST00000432057 WDHD1O75717 1129 aaPredicted RBP22.58■■□□□ 1.2
VRK2-205ENST00000432057 NDUFA8P51970 172 aa22.58■■□□□ 1.2
VRK2-205ENST00000432057 PICALMQ13492 652 aa22.58■■□□□ 1.2
VRK2-205ENST00000432057 FAM43AQ8N2R8 423 aa22.58■■□□□ 1.2
VRK2-205ENST00000432057 ANKS1AQ92625 1134 aa22.58■■□□□ 1.2
VRK2-205ENST00000432057 TCP11L1Q9NUJ3 509 aa22.58■■□□□ 1.2
VRK2-205ENST00000432057 PSME4Q14997 1843 aa22.57■■□□□ 1.2
VRK2-205ENST00000432057 PDGFDQ9GZP0 370 aaPredicted RBP22.57■■□□□ 1.2
VRK2-205ENST00000432057 ZNF287Q9HBT7 754 aa22.57■■□□□ 1.2
VRK2-205ENST00000432057 KCNQ5Q9NR82 932 aa22.57■■□□□ 1.2
VRK2-205ENST00000432057 XBP1P17861 261 aa22.56■■□□□ 1.2
VRK2-205ENST00000432057 ANO6Q4KMQ2 910 aa22.56■■□□□ 1.2
VRK2-205ENST00000432057 CCDC178Q5BJE1 867 aa22.56■■□□□ 1.2
VRK2-205ENST00000432057 SASS6Q6UVJ0 657 aa22.56■■□□□ 1.2
VRK2-205ENST00000432057 PHF20Q9BVI0 1012 aa22.56■■□□□ 1.2
VRK2-205ENST00000432057 CTAGE5O15320 804 aa22.56■■□□□ 1.2
VRK2-205ENST00000432057 PPP6R2O75170 966 aa22.56■■□□□ 1.2
VRK2-205ENST00000432057 TOB1P50616 345 aaPredicted RBP22.56■■□□□ 1.2
VRK2-205ENST00000432057 CNKSR1Q969H4 720 aa22.56■■□□□ 1.2
VRK2-205ENST00000432057 USP25Q9UHP3 1055 aa22.56■■□□□ 1.2
VRK2-205ENST00000432057 SIPA1L1O43166 1804 aa22.55■■□□□ 1.2
VRK2-205ENST00000432057 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.55■■□□□ 1.2
VRK2-205ENST00000432057 KIF5BP33176 963 aa22.55■■□□□ 1.2
VRK2-205ENST00000432057 PODNQ7Z5L7 613 aa22.55■■□□□ 1.2
VRK2-205ENST00000432057 FAM200AQ8TCP9 573 aa22.55■■□□□ 1.2
VRK2-205ENST00000432057 DDX4Q9NQI0 724 aaKnown RBP22.55■■□□□ 1.2
VRK2-205ENST00000432057 RRAGDQ9NQL2 400 aaPredicted RBP22.55■■□□□ 1.2
VRK2-205ENST00000432057 GRM4Q14833 912 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 DEFB132Q7Z7B7 95 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 JMYQ8N9B5 988 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 PIBF1Q8WXW3 757 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 STX8Q9UNK0 236 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 C10orf71Q711Q0 1435 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 ECE2O60344 883 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 PFKFB1P16118 471 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 CMA1P23946 247 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 KRT2P35908 639 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 CCDC125Q86Z20 511 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 STAG2Q8N3U4 1231 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 TMEM47Q9BQJ4 181 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 USP40Q9NVE5 1235 aa22.54■■□□□ 1.2
VRK2-205ENST00000432057 MYH4Q9Y623 1939 aa22.53■■□□□ 1.2
VRK2-205ENST00000432057 FAM205CA6NFA0 338 aa22.53■■□□□ 1.2
VRK2-205ENST00000432057 RILPL1Q5EBL4 403 aa22.53■■□□□ 1.2
VRK2-205ENST00000432057 NEDD1Q8NHV4 660 aa22.53■■□□□ 1.2
VRK2-205ENST00000432057 TEKT1Q969V4 418 aa22.53■■□□□ 1.2
VRK2-205ENST00000432057 SCG2P13521 617 aa22.52■■□□□ 1.2
VRK2-205ENST00000432057 HHIPL2Q6UWX4 724 aa22.52■■□□□ 1.2
VRK2-205ENST00000432057 C7orf43Q8WVR3 580 aa22.52■■□□□ 1.2
VRK2-205ENST00000432057 CLIC6Q96NY7 704 aa22.52■■□□□ 1.2
VRK2-205ENST00000432057 MAD2L2Q9UI95 211 aa22.52■■□□□ 1.2
VRK2-205ENST00000432057 MTMR7Q9Y216 660 aa22.52■■□□□ 1.2
VRK2-205ENST00000432057 GREB1LQ9C091 1923 aaPredicted RBP22.52■■□□□ 1.2
VRK2-205ENST00000432057 CDC42EP5Q6NZY7 148 aa22.51■■□□□ 1.19
VRK2-205ENST00000432057 SHC4Q6S5L8 630 aa22.51■■□□□ 1.19
VRK2-205ENST00000432057 DNAJC25Q9H1X3 360 aa22.51■■□□□ 1.19
VRK2-205ENST00000432057 CABP5Q9NP86 173 aa22.51■■□□□ 1.19
VRK2-205ENST00000432057 PCDHB6Q9Y5E3 794 aa22.51■■□□□ 1.19
VRK2-205ENST00000432057 CRKP46108 304 aa22.51■■□□□ 1.19
VRK2-205ENST00000432057 NPY5RQ15761 445 aa22.51■■□□□ 1.19
VRK2-205ENST00000432057 AOC3Q16853 763 aa22.51■■□□□ 1.19
VRK2-205ENST00000432057 PFKFB3Q16875 520 aaPredicted RBP22.51■■□□□ 1.19
VRK2-205ENST00000432057 EARS2Q5JPH6 523 aaKnown RBP22.51■■□□□ 1.19
VRK2-205ENST00000432057 ERCC4Q92889 916 aaPredicted RBP22.51■■□□□ 1.19
VRK2-205ENST00000432057 CBX8Q9HC52 389 aa22.51■■□□□ 1.19
VRK2-205ENST00000432057 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.51■■□□□ 1.19
VRK2-205ENST00000432057 KIF13BQ9NQT8 1826 aa22.5■■□□□ 1.19
VRK2-205ENST00000432057 CUTAO60888 179 aa22.5■■□□□ 1.19
VRK2-205ENST00000432057 VEGFAP15692 232 aaPredicted RBP22.5■■□□□ 1.19
VRK2-205ENST00000432057 DACT2Q5SW24 774 aa22.5■■□□□ 1.19
VRK2-205ENST00000432057 APOBEC3HQ6NTF7 200 aaKnown RBP22.5■■□□□ 1.19
VRK2-205ENST00000432057 RASGRP2Q7LDG7 609 aa22.5■■□□□ 1.19
VRK2-205ENST00000432057 LUZP1Q86V48 1076 aa22.5■■□□□ 1.19
VRK2-205ENST00000432057 KIAA0825Q8IV33 1275 aa22.5■■□□□ 1.19
VRK2-205ENST00000432057 ZNF202O95125 648 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 ATP2B1P20020 1258 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms