RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 HAUS3Q68CZ6 603 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 RASSF2P50749 326 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 ME3Q16798 604 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 MYCT1Q8N699 235 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 TMEM87BQ96K49 555 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 CAPS2Q9BXY5 557 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 BUB1O43683 1085 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 CLTAP09496 248 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 LONRF2Q1L5Z9 754 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 DCUN1D2Q6PH85 259 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 GPT2Q8TD30 523 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 NPATQ14207 1427 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 FAM89AQ96GI7 184 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 RAB17Q9H0T7 212 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 A0A1W2PP64 1363 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 ADAT2Q7Z6V5 191 aaKnown RBP12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 VPS37BQ9H9H4 285 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 TRPM2O94759 1503 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 STX2P32856 288 aa12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 RBM26Q5T8P6 1007 aaKnown RBP12.98□□□□□ -0.33
RIMKLA-202ENST00000431473 BCRP11274 1271 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 AFAP1L2Q8N4X5 818 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 NLRC4Q9NPP4 1024 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 VPS54Q9P1Q0 977 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 KCNJ18B7U540 433 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 KCNK3O14649 394 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 GIPC1O14908 333 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 GRM1Q13255 1194 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 KCNJ12Q14500 433 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 DIXDC1Q155Q3 683 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 NELFCDQ8IXH7 590 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 DIS3L2Q8IYB7 885 aaKnown RBP12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 PDE11AQ9HCR9 933 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 PNMA6EA0A0J9YXQ4 647 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 SGSM2O43147 1006 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 ABCB4P21439 1286 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 TSKSQ9UJT2 592 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 PRDM1O75626 825 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 ITGA6P23229 1130 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 MAGEA1P43355 309 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 WHAMMP3Q1A5X7 153 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 XAGE2Q96GT9 111 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 STRN3Q13033 797 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 PKP1Q13835 747 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 TAF12Q16514 161 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 HERC4Q5GLZ8 1057 aaPredicted RBP12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 ANKRD20A3Q5VUR7 823 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 CCDC13Q8IYE1 715 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 KRT12Q99456 494 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 LSM14BQ9BX40 385 aaKnown RBP12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 ARHGAP42A6NI28 874 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 BSPRYQ5W0U4 402 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 CMTR1Q8N1G2 835 aaKnown RBP12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 RABGAP1Q9Y3P9 1069 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 FLT4P35916 1363 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 ARHGAP44Q17R89 818 aa12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 URB2Q14146 1524 aaKnown RBP12.97□□□□□ -0.33
RIMKLA-202ENST00000431473 KRIT1O00522 736 aa12.96□□□□□ -0.33
RIMKLA-202ENST00000431473 BAG2O95816 211 aa12.96□□□□□ -0.33
RIMKLA-202ENST00000431473 BRD3Q15059 726 aa12.96□□□□□ -0.33
RIMKLA-202ENST00000431473 MAN1A1P33908 653 aa12.96□□□□□ -0.33
RIMKLA-202ENST00000431473 USH1CQ9Y6N9 552 aa12.96□□□□□ -0.33
RIMKLA-202ENST00000431473 MRPL12P52815 198 aaKnown RBP12.96□□□□□ -0.33
RIMKLA-202ENST00000431473 SNX29Q8TEQ0 813 aa12.96□□□□□ -0.33
RIMKLA-202ENST00000431473 GPATCH8Q9UKJ3 1502 aaKnown RBP12.96□□□□□ -0.33
RIMKLA-202ENST00000431473 WDR7Q9Y4E6 1490 aa12.96□□□□□ -0.33
RIMKLA-202ENST00000431473 COG7P83436 770 aa12.96□□□□□ -0.33
RIMKLA-202ENST00000431473 PUM3Q15397 648 aaKnown RBP12.96□□□□□ -0.33
RIMKLA-202ENST00000431473 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.33
RIMKLA-202ENST00000431473 SLC8A3P57103 927 aa12.96□□□□□ -0.33
RIMKLA-202ENST00000431473 MORC3Q14149 939 aa12.96□□□□□ -0.34
RIMKLA-202ENST00000431473 KCTD16Q68DU8 428 aa12.96□□□□□ -0.34
RIMKLA-202ENST00000431473 GRIN2AQ12879 1464 aa12.96□□□□□ -0.34
RIMKLA-202ENST00000431473 ARHGEF35A5YM69 484 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 ZC3H12CQ9C0D7 883 aaKnown RBP12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 PPP2R2CQ9Y2T4 447 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 TEX11Q8IYF3 940 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 CABLES1Q8TDN4 633 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 KIAA1468Q9P260 1216 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 CAPN12Q6ZSI9 719 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 TRIM58Q8NG06 486 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 ATP2A3Q93084 1043 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 PLCH2O75038 1416 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 AMFRQ9UKV5 643 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 MAP7Q14244 749 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 GOLGA8KD6RF30 607 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 RPSAP08865 295 aaKnown RBP12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 BCAS4Q8TDM0 211 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 DBNDD2Q9BQY9 259 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 CARD14Q9BXL6 1004 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 NUP160Q12769 1436 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 EFCAB8A8MWE9 144 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 RDH13Q8NBN7 331 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 KLHL14Q9P2G3 628 aa12.95□□□□□ -0.34
RIMKLA-202ENST00000431473 NXNQ6DKJ4 435 aa12.94□□□□□ -0.34
RIMKLA-202ENST00000431473 RSAD2Q8WXG1 361 aa12.94□□□□□ -0.34
RIMKLA-202ENST00000431473 DNM3Q9UQ16 869 aa12.94□□□□□ -0.34
RIMKLA-202ENST00000431473 PARP2Q9UGN5 583 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms