RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 ECM2O94769 699 aaPredicted RBP18.32■□□□□ 0.52
TSPAN9-203ENST00000431374 USP14P54578 494 aa18.32■□□□□ 0.52
TSPAN9-203ENST00000431374 TICAM2Q86XR7 235 aa18.32■□□□□ 0.52
TSPAN9-203ENST00000431374 CCDC17Q96LX7 622 aa18.32■□□□□ 0.52
TSPAN9-203ENST00000431374 PTCH2Q9Y6C5 1203 aa18.32■□□□□ 0.52
TSPAN9-203ENST00000431374 LOC285556D6RIA3 1793 aa18.32■□□□□ 0.52
TSPAN9-203ENST00000431374 PTPRFP10586 1907 aa18.31■□□□□ 0.52
TSPAN9-203ENST00000431374 MYH7P12883 1935 aa18.31■□□□□ 0.52
TSPAN9-203ENST00000431374 ROBO3Q96MS0 1386 aa18.31■□□□□ 0.52
TSPAN9-203ENST00000431374 ATAD5Q96QE3 1844 aa18.31■□□□□ 0.52
TSPAN9-203ENST00000431374 APPP05067 770 aa18.31■□□□□ 0.52
TSPAN9-203ENST00000431374 GCLCP48506 637 aaPredicted RBP18.31■□□□□ 0.52
TSPAN9-203ENST00000431374 TDO2P48775 406 aa18.31■□□□□ 0.52
TSPAN9-203ENST00000431374 IRX3P78415 501 aaPredicted RBP18.31■□□□□ 0.52
TSPAN9-203ENST00000431374 ZYXQ15942 572 aaKnown RBP18.31■□□□□ 0.52
TSPAN9-203ENST00000431374 FAM110CQ1W6H9 321 aa18.31■□□□□ 0.52
TSPAN9-203ENST00000431374 IFNL3Q8IZI9 196 aa18.31■□□□□ 0.52
TSPAN9-203ENST00000431374 ANKRD13CQ8N6S4 541 aa18.31■□□□□ 0.52
TSPAN9-203ENST00000431374 NACAP1Q9BZK3 213 aa18.31■□□□□ 0.52
TSPAN9-203ENST00000431374 A0A1W2PRG0 241 aa18.3■□□□□ 0.52
TSPAN9-203ENST00000431374 MINDY4BA8MYZ0 360 aa18.3■□□□□ 0.52
TSPAN9-203ENST00000431374 TRIM6-TRIM34B2RNG4 842 aa18.3■□□□□ 0.52
TSPAN9-203ENST00000431374 FOXP2O15409 715 aa18.3■□□□□ 0.52
TSPAN9-203ENST00000431374 FMNL1O95466 1100 aaPredicted RBP18.3■□□□□ 0.52
TSPAN9-203ENST00000431374 PRMT2P55345 433 aa18.3■□□□□ 0.52
TSPAN9-203ENST00000431374 FCGRTP55899 365 aa18.3■□□□□ 0.52
TSPAN9-203ENST00000431374 CCDC129Q6ZRS4 1044 aa18.3■□□□□ 0.52
TSPAN9-203ENST00000431374 ARMC5Q96C12 935 aa18.3■□□□□ 0.52
TSPAN9-203ENST00000431374 P2RX7Q99572 595 aaKnown RBP18.3■□□□□ 0.52
TSPAN9-203ENST00000431374 HELLSQ9NRZ9 838 aa18.3■□□□□ 0.52
TSPAN9-203ENST00000431374 SRRDQ9UH36 339 aa18.3■□□□□ 0.52
TSPAN9-203ENST00000431374 VCAM1P19320 739 aa18.29■□□□□ 0.52
TSPAN9-203ENST00000431374 SOX10P56693 466 aa18.29■□□□□ 0.52
TSPAN9-203ENST00000431374 HERVK_113P62684 666 aa18.29■□□□□ 0.52
TSPAN9-203ENST00000431374 ICA1Q05084 483 aa18.29■□□□□ 0.52
TSPAN9-203ENST00000431374 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
TSPAN9-203ENST00000431374 SIAH1Q8IUQ4 282 aa18.29■□□□□ 0.52
TSPAN9-203ENST00000431374 FAM227BQ96M60 508 aa18.29■□□□□ 0.52
TSPAN9-203ENST00000431374 A0A0D9SFI3 127 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 USP17L15C9J2P7 530 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 USP17L13C9JLJ4 530 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 USP17L11C9JVI0 530 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 USP17L18D6R9N7 530 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 USP17L22D6RA61 530 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 USP17L17D6RBQ6 530 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 USP17L19D6RCP7 530 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 USP17L20D6RJB6 530 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 PDE4AP27815 886 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 HOXD10P28358 340 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 USP17L24Q0WX57 530 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 RILPL2Q969X0 211 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 NAPBQ9H115 298 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 MORF4L1Q9UBU8 362 aa18.28■□□□□ 0.52
TSPAN9-203ENST00000431374 MYPNQ86TC9 1320 aa18.27■□□□□ 0.52
TSPAN9-203ENST00000431374 RASA1P20936 1047 aa18.27■□□□□ 0.52
TSPAN9-203ENST00000431374 RGS19P49795 217 aa18.27■□□□□ 0.52
TSPAN9-203ENST00000431374 PRKCZQ05513 592 aa18.27■□□□□ 0.52
TSPAN9-203ENST00000431374 MCMDC2Q4G0Z9 681 aa18.27■□□□□ 0.52
TSPAN9-203ENST00000431374 VPS53Q5VIR6 699 aa18.27■□□□□ 0.52
TSPAN9-203ENST00000431374 STK11IPQ8N1F8 1099 aa18.27■□□□□ 0.52
TSPAN9-203ENST00000431374 GTF3C2Q8WUA4 911 aaPredicted RBP18.27■□□□□ 0.52
TSPAN9-203ENST00000431374 MKNK2Q9HBH9 465 aa18.27■□□□□ 0.52
TSPAN9-203ENST00000431374 NMIQ13287 307 aaPredicted RBP18.26■□□□□ 0.51
TSPAN9-203ENST00000431374 SLC9C1Q4G0N8 1177 aa18.26■□□□□ 0.51
TSPAN9-203ENST00000431374 CATSPERGQ6ZRH7 1159 aa18.26■□□□□ 0.51
TSPAN9-203ENST00000431374 RPAP3Q9H6T3 665 aaPredicted RBP18.26■□□□□ 0.51
TSPAN9-203ENST00000431374 KANSL2Q9H9L4 492 aa18.26■□□□□ 0.51
TSPAN9-203ENST00000431374 ARHGEF10LQ9HCE6 1279 aa18.26■□□□□ 0.51
TSPAN9-203ENST00000431374 TXNRD2Q9NNW7 524 aa18.26■□□□□ 0.51
TSPAN9-203ENST00000431374 TMX2Q9Y320 296 aa18.26■□□□□ 0.51
TSPAN9-203ENST00000431374 BAZ2AQ9UIF9 1905 aaKnown RBP18.25■□□□□ 0.51
TSPAN9-203ENST00000431374 TNPO2O14787 897 aaKnown RBP18.25■□□□□ 0.51
TSPAN9-203ENST00000431374 SDSP20132 328 aa18.25■□□□□ 0.51
TSPAN9-203ENST00000431374 PPARAQ07869 468 aa18.25■□□□□ 0.51
TSPAN9-203ENST00000431374 KIAA1755Q5JYT7 1200 aa18.25■□□□□ 0.51
TSPAN9-203ENST00000431374 POTEEQ6S8J3 1075 aa18.25■□□□□ 0.51
TSPAN9-203ENST00000431374 ZNF333Q96JL9 665 aa18.25■□□□□ 0.51
TSPAN9-203ENST00000431374 SH2D4AQ9H788 454 aa18.25■□□□□ 0.51
TSPAN9-203ENST00000431374 ZNF287Q9HBT7 754 aa18.25■□□□□ 0.51
TSPAN9-203ENST00000431374 RBPJLQ9UBG7 517 aa18.25■□□□□ 0.51
TSPAN9-203ENST00000431374 CENPFP49454 3210 aa18.25■□□□□ 0.51
TSPAN9-203ENST00000431374 ZSWIM8A7E2V4 1837 aa18.24■□□□□ 0.51
TSPAN9-203ENST00000431374 PEX10O60683 326 aa18.24■□□□□ 0.51
TSPAN9-203ENST00000431374 PRDM1O75626 825 aa18.24■□□□□ 0.51
TSPAN9-203ENST00000431374 EEF2P13639 858 aaKnown RBP18.24■□□□□ 0.51
TSPAN9-203ENST00000431374 ZNF589Q86UQ0 364 aaPredicted RBP18.24■□□□□ 0.51
TSPAN9-203ENST00000431374 GPRC5AQ8NFJ5 357 aa18.24■□□□□ 0.51
TSPAN9-203ENST00000431374 RAET1EQ8TD07 263 aa18.24■□□□□ 0.51
TSPAN9-203ENST00000431374 SH3TC2Q8TF17 1288 aa18.24■□□□□ 0.51
TSPAN9-203ENST00000431374 LPAR1Q92633 364 aa18.24■□□□□ 0.51
TSPAN9-203ENST00000431374 VCPKMTQ9H867 229 aa18.24■□□□□ 0.51
TSPAN9-203ENST00000431374 GABRQQ9UN88 632 aa18.24■□□□□ 0.51
TSPAN9-203ENST00000431374 SLC3A2P08195 630 aaKnown RBP18.23■□□□□ 0.51
TSPAN9-203ENST00000431374 ATP2B2Q01814 1243 aa18.23■□□□□ 0.51
TSPAN9-203ENST00000431374 ALX1Q15699 326 aa18.23■□□□□ 0.51
TSPAN9-203ENST00000431374 NBPF11Q86T75 865 aa18.23■□□□□ 0.51
TSPAN9-203ENST00000431374 CCDC171Q6TFL3 1326 aa18.23■□□□□ 0.51
TSPAN9-203ENST00000431374 IGKV6D-41A0A0C4DH26 115 aa18.22■□□□□ 0.51
TSPAN9-203ENST00000431374 SPDYE16A6NNV3 312 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms