RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 TMEM47Q9BQJ4 181 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 IL17RBQ9NRM6 502 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 CDC25AP30304 524 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 FSIP1Q8NA03 581 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 ZMYM6O95789 1325 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 RFX7Q2KHR2 1363 aa13.03□□□□□ -0.32
SMPD4-205ENST00000431183 CICQ96RK0 1608 aaPredicted RBP13.03□□□□□ -0.32
SMPD4-205ENST00000431183 MARCH6O60337 910 aa13.02□□□□□ -0.32
SMPD4-205ENST00000431183 GH2P01242 217 aa13.02□□□□□ -0.32
SMPD4-205ENST00000431183 PIK3AP1Q6ZUJ8 805 aa13.02□□□□□ -0.32
SMPD4-205ENST00000431183 ANP32BQ92688 251 aaKnown RBP13.02□□□□□ -0.32
SMPD4-205ENST00000431183 STAMQ92783 540 aa13.02□□□□□ -0.32
SMPD4-205ENST00000431183 CCDC196A0A1B0GTZ2 297 aa13.02□□□□□ -0.33
SMPD4-205ENST00000431183 KLRF2D3W0D1 207 aa13.02□□□□□ -0.33
SMPD4-205ENST00000431183 RASA1P20936 1047 aa13.02□□□□□ -0.33
SMPD4-205ENST00000431183 CERKLQ49MI3 558 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-205ENST00000431183 CIAPIN1Q6FI81 312 aa13.02□□□□□ -0.33
SMPD4-205ENST00000431183 TMC4Q7Z404 712 aa13.02□□□□□ -0.33
SMPD4-205ENST00000431183 RTKN2Q8IZC4 609 aa13.02□□□□□ -0.33
SMPD4-205ENST00000431183 LEO1Q8WVC0 666 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-205ENST00000431183 DGKZQ13574 1117 aa13.02□□□□□ -0.33
SMPD4-205ENST00000431183 TTLL12Q14166 644 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-205ENST00000431183 ALX1Q15699 326 aa13.02□□□□□ -0.33
SMPD4-205ENST00000431183 EAPPQ56P03 285 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-205ENST00000431183 STRIP1Q5VSL9 837 aa13.02□□□□□ -0.33
SMPD4-205ENST00000431183 JAKMIP3Q5VZ66 844 aa13.02□□□□□ -0.33
SMPD4-205ENST00000431183 FBXO18Q8NFZ0 1043 aa13.02□□□□□ -0.33
SMPD4-205ENST00000431183 COA7Q96BR5 231 aa13.02□□□□□ -0.33
SMPD4-205ENST00000431183 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.02□□□□□ -0.334e-6■■□□□ 13.5
SMPD4-205ENST00000431183 MYO1BO43795 1136 aa13.01□□□□□ -0.33
SMPD4-205ENST00000431183 MSNP26038 577 aaKnown RBP13.01□□□□□ -0.33
SMPD4-205ENST00000431183 MCM7P33993 719 aa13.01□□□□□ -0.33
SMPD4-205ENST00000431183 SKOR2Q2VWA4 1001 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-205ENST00000431183 CCDC73Q6ZRK6 1079 aa13.01□□□□□ -0.33
SMPD4-205ENST00000431183 CCAR1Q8IX12 1150 aaKnown RBP13.01□□□□□ -0.33
SMPD4-205ENST00000431183 SRBD1Q8N5C6 995 aaKnown RBP13.01□□□□□ -0.33
SMPD4-205ENST00000431183 SBF2Q86WG5 1849 aa13.01□□□□□ -0.33
SMPD4-205ENST00000431183 BAZ2AQ9UIF9 1905 aaKnown RBP13.01□□□□□ -0.33
SMPD4-205ENST00000431183 MYH13Q9UKX3 1938 aa13.01□□□□□ -0.33
SMPD4-205ENST00000431183 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
SMPD4-205ENST00000431183 KCNA3P22001 575 aa13.01□□□□□ -0.33
SMPD4-205ENST00000431183 SPON1Q9HCB6 807 aa13.01□□□□□ -0.33
SMPD4-205ENST00000431183 FAM217BQ9NTX9 383 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-205ENST00000431183 PTMAP06454 111 aaKnown RBP13□□□□□ -0.33
SMPD4-205ENST00000431183 NAPAP54920 295 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 MICALL2Q8IY33 904 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 SUPT20HQ8NEM7 779 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 TNMDQ9H2S6 317 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 R3HCC1Q9Y3T6 440 aaKnown RBP13□□□□□ -0.33
SMPD4-205ENST00000431183 DDX60Q8IY21 1712 aaKnown RBP13□□□□□ -0.33
SMPD4-205ENST00000431183 KLRG2A4D1S0 409 aaPredicted RBP13□□□□□ -0.33
SMPD4-205ENST00000431183 NR1I2O75469 434 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 PARP1P09874 1014 aaKnown RBP13□□□□□ -0.33
SMPD4-205ENST00000431183 XBP1P17861 261 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 GMPSP49915 693 aaPredicted RBP13□□□□□ -0.33
SMPD4-205ENST00000431183 KLHL40Q2TBA0 621 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 TMTC2Q8N394 836 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 OSBPL5Q9H0X9 879 aaPredicted RBP13□□□□□ -0.33
SMPD4-205ENST00000431183 HOMER2Q9NSB8 354 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 RNF181Q9P0P0 153 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 ZNRF3Q9ULT6 936 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 ZNF396Q96N95 335 aaPredicted RBP13□□□□□ -0.33
SMPD4-205ENST00000431183 PIGSQ96S52 555 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 SEC63Q9UGP8 760 aaKnown RBP13□□□□□ -0.33
SMPD4-205ENST00000431183 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 ANKRD36CQ5JPF3 1778 aa13□□□□□ -0.33
SMPD4-205ENST00000431183 DDNO94850 711 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-205ENST00000431183 GRM1Q13255 1194 aa12.99□□□□□ -0.33
SMPD4-205ENST00000431183 CPXCR1Q8N123 301 aa12.99□□□□□ -0.33
SMPD4-205ENST00000431183 PRDM10Q9NQV6 1147 aa12.99□□□□□ -0.33
SMPD4-205ENST00000431183 ZHX1Q9UKY1 873 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-205ENST00000431183 CFAP45Q9UL16 551 aa12.99□□□□□ -0.33
SMPD4-205ENST00000431183 CENPFP49454 3210 aa12.99□□□□□ -0.33
SMPD4-205ENST00000431183 SLC1A4P43007 532 aa12.99□□□□□ -0.33
SMPD4-205ENST00000431183 RSBN1LQ6PCB5 846 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-205ENST00000431183 BIN2Q9UBW5 565 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-205ENST00000431183 AKAP11Q9UKA4 1901 aa12.99□□□□□ -0.33
SMPD4-205ENST00000431183 ADAMTS3O15072 1205 aa12.99□□□□□ -0.33
SMPD4-205ENST00000431183 KIF5BP33176 963 aa12.99□□□□□ -0.33
SMPD4-205ENST00000431183 MKRN3Q13064 507 aaKnown RBP12.99□□□□□ -0.33
SMPD4-205ENST00000431183 RESTQ13127 1097 aa12.99□□□□□ -0.33
SMPD4-205ENST00000431183 SYAP1Q96A49 352 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-205ENST00000431183 CNOT7Q9UIV1 285 aaKnown RBP12.99□□□□□ -0.33
SMPD4-205ENST00000431183 COL5A3P25940 1745 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-205ENST00000431183 KINO60870 393 aaKnown RBP12.98□□□□□ -0.33
SMPD4-205ENST00000431183 LIFRP42702 1097 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 ICA1Q05084 483 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 CC2D2BQ6DHV5 1058 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 CCDC174Q6PII3 467 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 SLC16A10Q8TF71 515 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 SCAND2PQ9GZW5 306 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-205ENST00000431183 ECE1P42892 770 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 UBXN2AP68543 259 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 CSPP1Q1MSJ5 1256 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 SOGA3Q5TF21 947 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 MYSM1Q5VVJ2 828 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 ILDR2Q71H61 639 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 NFKBIEO00221 500 aa12.98□□□□□ -0.33
SMPD4-205ENST00000431183 EEF2P13639 858 aaKnown RBP12.98□□□□□ -0.33
SMPD4-205ENST00000431183 TNNI2P48788 182 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms