RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 HAUS7Q99871 368 aa19.72■□□□□ 0.75
PTPRA-206ENST00000430705 PORCNQ9H237 461 aa19.72■□□□□ 0.75
PTPRA-206ENST00000430705 MYH8P13535 1937 aa19.72■□□□□ 0.75
PTPRA-206ENST00000430705 RLFQ13129 1914 aa19.72■□□□□ 0.75
PTPRA-206ENST00000430705 H0YGN5 161 aa19.71■□□□□ 0.75
PTPRA-206ENST00000430705 SGPL1O95470 568 aa19.71■□□□□ 0.75
PTPRA-206ENST00000430705 RAB3GAP1Q15042 981 aa19.71■□□□□ 0.75
PTPRA-206ENST00000430705 TRIB2Q92519 343 aa19.71■□□□□ 0.75
PTPRA-206ENST00000430705 KIAA1683Q9H0B3 1180 aa19.71■□□□□ 0.75
PTPRA-206ENST00000430705 MCM9Q9NXL9 1143 aa19.71■□□□□ 0.75
PTPRA-206ENST00000430705 MBD4O95243 580 aa19.7■□□□□ 0.74
PTPRA-206ENST00000430705 VCAM1P19320 739 aa19.7■□□□□ 0.74
PTPRA-206ENST00000430705 ERVK-9P63128 1117 aa19.7■□□□□ 0.74
PTPRA-206ENST00000430705 ERVK-24P63145 666 aa19.7■□□□□ 0.74
PTPRA-206ENST00000430705 SEPT2Q15019 361 aa19.7■□□□□ 0.74
PTPRA-206ENST00000430705 GCC1Q96CN9 775 aa19.7■□□□□ 0.74
PTPRA-206ENST00000430705 DEFB118Q96PH6 123 aa19.7■□□□□ 0.74
PTPRA-206ENST00000430705 CRISPLD2Q9H0B8 497 aa19.7■□□□□ 0.74
PTPRA-206ENST00000430705 SZT2Q5T011 3432 aa19.69■□□□□ 0.74
PTPRA-206ENST00000430705 A0A1W2PRG0 241 aa19.69■□□□□ 0.74
PTPRA-206ENST00000430705 FARP2O94887 1054 aaPredicted RBP19.69■□□□□ 0.74
PTPRA-206ENST00000430705 HMGCRP04035 888 aa19.69■□□□□ 0.74
PTPRA-206ENST00000430705 POLR3DP05423 398 aaPredicted RBP19.69■□□□□ 0.74
PTPRA-206ENST00000430705 GPRC5AQ8NFJ5 357 aa19.69■□□□□ 0.74
PTPRA-206ENST00000430705 USP6NLQ92738 828 aa19.69■□□□□ 0.74
PTPRA-206ENST00000430705 DYNLL2Q96FJ2 89 aa19.69■□□□□ 0.74
PTPRA-206ENST00000430705 FEZ1Q99689 392 aa19.69■□□□□ 0.74
PTPRA-206ENST00000430705 PAGR1Q9BTK6 254 aa19.69■□□□□ 0.74
PTPRA-206ENST00000430705 LRRCC1Q9C099 1032 aa19.69■□□□□ 0.74
PTPRA-206ENST00000430705 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.69■□□□□ 0.746e-7■□□□□ 10.8
PTPRA-206ENST00000430705 CHMP4BQ9H444 224 aaKnown RBP19.69■□□□□ 0.74
PTPRA-206ENST00000430705 PARP14Q460N5 1801 aa19.69■□□□□ 0.74
PTPRA-206ENST00000430705 CYP2D7A0A087X1C5 515 aa19.68■□□□□ 0.74
PTPRA-206ENST00000430705 CLEC10AQ8IUN9 316 aa19.68■□□□□ 0.74
PTPRA-206ENST00000430705 COLQQ9Y215 455 aaPredicted RBP19.68■□□□□ 0.74
PTPRA-206ENST00000430705 GREB1LQ9C091 1923 aaPredicted RBP19.67■□□□□ 0.74
PTPRA-206ENST00000430705 KIAA1755Q5JYT7 1200 aa19.67■□□□□ 0.74
PTPRA-206ENST00000430705 MAP3K21Q5TCX8 1036 aa19.67■□□□□ 0.74
PTPRA-206ENST00000430705 CATSPERGQ6ZRH7 1159 aa19.67■□□□□ 0.74
PTPRA-206ENST00000430705 DIS3LQ8TF46 1054 aaKnown RBP19.67■□□□□ 0.74
PTPRA-206ENST00000430705 FRMPD3Q5JV73 1810 aa19.67■□□□□ 0.74
PTPRA-206ENST00000430705 SPDYE16A6NNV3 312 aaPredicted RBP19.66■□□□□ 0.74
PTPRA-206ENST00000430705 USP17L15C9J2P7 530 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 USP17L13C9JLJ4 530 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 USP17L11C9JVI0 530 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 USP17L18D6R9N7 530 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 USP17L22D6RA61 530 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 USP17L17D6RBQ6 530 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 USP17L19D6RCP7 530 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 USP17L20D6RJB6 530 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 CYP2B6P20813 491 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 MNX1P50219 401 aaPredicted RBP19.66■□□□□ 0.74
PTPRA-206ENST00000430705 USP14P54578 494 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 USP17L24Q0WX57 530 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 UBE3CQ15386 1083 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 MORN1Q5T089 497 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 TSHZ3Q63HK5 1081 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 GPR142Q7Z601 462 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 SIAH1Q8IUQ4 282 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 GTF3C2Q8WUA4 911 aaPredicted RBP19.66■□□□□ 0.74
PTPRA-206ENST00000430705 PUS7LQ9H0K6 701 aaKnown RBP19.66■□□□□ 0.74
PTPRA-206ENST00000430705 BTBD7Q9P203 1132 aa19.66■□□□□ 0.74
PTPRA-206ENST00000430705 AKR1B1P15121 316 aa19.65■□□□□ 0.74
PTPRA-206ENST00000430705 MAPK4P31152 587 aa19.65■□□□□ 0.74
PTPRA-206ENST00000430705 CCL14Q16627 93 aa19.65■□□□□ 0.74
PTPRA-206ENST00000430705 LBX2Q6XYB7 198 aa19.65■□□□□ 0.74
PTPRA-206ENST00000430705 SOCS4Q8WXH5 440 aa19.65■□□□□ 0.74
PTPRA-206ENST00000430705 RPAP3Q9H6T3 665 aaPredicted RBP19.65■□□□□ 0.74
PTPRA-206ENST00000430705 DCTPP1Q9H773 170 aa19.65■□□□□ 0.74
PTPRA-206ENST00000430705 CABP5Q9NP86 173 aa19.65■□□□□ 0.74
PTPRA-206ENST00000430705 RABGAP1Q9Y3P9 1069 aa19.65■□□□□ 0.74
PTPRA-206ENST00000430705 ZNF236Q9UL36 1845 aa19.65■□□□□ 0.74
PTPRA-206ENST00000430705 C12orf60Q5U649 245 aa19.64■□□□□ 0.73
PTPRA-206ENST00000430705 NUDT12Q9BQG2 462 aa19.64■□□□□ 0.73
PTPRA-206ENST00000430705 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.64■□□□□ 0.73
PTPRA-206ENST00000430705 ATP8A2Q9NTI2 1148 aa19.64■□□□□ 0.73
PTPRA-206ENST00000430705 RPTORQ8N122 1335 aa19.63■□□□□ 0.73
PTPRA-206ENST00000430705 MPHOSPH10O00566 681 aaKnown RBP19.63■□□□□ 0.73
PTPRA-206ENST00000430705 TFRCP02786 760 aaKnown RBP19.63■□□□□ 0.73
PTPRA-206ENST00000430705 XRCC5P13010 732 aaKnown RBP19.63■□□□□ 0.73
PTPRA-206ENST00000430705 FXR1P51114 621 aaKnown RBP eCLIP19.63■□□□□ 0.73
PTPRA-206ENST00000430705 PLEKHH3Q7Z736 793 aa19.63■□□□□ 0.73
PTPRA-206ENST00000430705 DPF3Q92784 378 aa19.63■□□□□ 0.73
PTPRA-206ENST00000430705 ECHDC1Q9NTX5 307 aa19.63■□□□□ 0.73
PTPRA-206ENST00000430705 SWAP70Q9UH65 585 aa19.63■□□□□ 0.73
PTPRA-206ENST00000430705 PRKAR2AP13861 404 aaKnown RBP19.62■□□□□ 0.73
PTPRA-206ENST00000430705 TMEM179Q6ZVK1 233 aa19.62■□□□□ 0.73
PTPRA-206ENST00000430705 PAWRQ96IZ0 340 aaKnown RBP19.62■□□□□ 0.73
PTPRA-206ENST00000430705 HTATIP2Q9BUP3 242 aa19.62■□□□□ 0.73
PTPRA-206ENST00000430705 PRO3102Q9H379 93 aa19.62■□□□□ 0.73
PTPRA-206ENST00000430705 PCDHB15Q9Y5E8 787 aa19.62■□□□□ 0.73
PTPRA-206ENST00000430705 LAMA3Q16787 3333 aa19.62■□□□□ 0.73
PTPRA-206ENST00000430705 TRIOBPQ9H2D6 2365 aa19.62■□□□□ 0.73
PTPRA-206ENST00000430705 USP17L12C9JPN9 530 aa19.61■□□□□ 0.73
PTPRA-206ENST00000430705 USP17L21D6R901 530 aa19.61■□□□□ 0.73
PTPRA-206ENST00000430705 CDK8P49336 464 aa19.61■□□□□ 0.73
PTPRA-206ENST00000430705 CACNB2Q08289 660 aaPredicted RBP19.61■□□□□ 0.73
PTPRA-206ENST00000430705 CTR9Q6PD62 1173 aa19.61■□□□□ 0.73
PTPRA-206ENST00000430705 CHRDL2Q6WN34 429 aa19.61■□□□□ 0.73
PTPRA-206ENST00000430705 C16orf86Q6ZW13 317 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms