RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 CCDC171Q6TFL3 1326 aa20.83■□□□□ 0.93
CTSD-203ENST00000429746 TLR2O60603 784 aa20.83■□□□□ 0.93
CTSD-203ENST00000429746 SP3Q02447 781 aa20.83■□□□□ 0.93
CTSD-203ENST00000429746 ALX1Q15699 326 aa20.83■□□□□ 0.93
CTSD-203ENST00000429746 C17orf99Q6UX52 265 aa20.83■□□□□ 0.93
CTSD-203ENST00000429746 FASTKD5Q7L8L6 764 aaKnown RBP20.83■□□□□ 0.93
CTSD-203ENST00000429746 AS3MTQ9HBK9 375 aa20.83■□□□□ 0.93
CTSD-203ENST00000429746 CYP2C8P10632 490 aa20.82■□□□□ 0.92
CTSD-203ENST00000429746 HSPD1P10809 573 aaKnown RBP20.82■□□□□ 0.92
CTSD-203ENST00000429746 POTEEQ6S8J3 1075 aa20.82■□□□□ 0.92
CTSD-203ENST00000429746 GADL1Q6ZQY3 521 aa20.82■□□□□ 0.92
CTSD-203ENST00000429746 C12orf42Q96LP6 360 aa20.82■□□□□ 0.92
CTSD-203ENST00000429746 NBPF3Q9H094 633 aa20.82■□□□□ 0.92
CTSD-203ENST00000429746 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.82■□□□□ 0.92
CTSD-203ENST00000429746 PARP14Q460N5 1801 aa20.82■□□□□ 0.92
CTSD-203ENST00000429746 ZMYM6O95789 1325 aa20.81■□□□□ 0.92
CTSD-203ENST00000429746 MINDY4BA8MYZ0 360 aa20.81■□□□□ 0.92
CTSD-203ENST00000429746 USP17L10C9JJH3 530 aa20.81■□□□□ 0.92
CTSD-203ENST00000429746 BCRP11274 1271 aa20.81■□□□□ 0.92
CTSD-203ENST00000429746 CTGFP29279 349 aa20.81■□□□□ 0.92
CTSD-203ENST00000429746 TDO2P48775 406 aa20.81■□□□□ 0.92
CTSD-203ENST00000429746 KIAA1755Q5JYT7 1200 aa20.81■□□□□ 0.92
CTSD-203ENST00000429746 DDRGK1Q96HY6 314 aa20.81■□□□□ 0.92
CTSD-203ENST00000429746 IGKV6D-41A0A0C4DH26 115 aa20.8■□□□□ 0.92
CTSD-203ENST00000429746 FGAP02671 866 aa20.8■□□□□ 0.92
CTSD-203ENST00000429746 APPP05067 770 aa20.8■□□□□ 0.92
CTSD-203ENST00000429746 PPARAQ07869 468 aa20.8■□□□□ 0.92
CTSD-203ENST00000429746 RAB3GAP1Q15042 981 aa20.8■□□□□ 0.92
CTSD-203ENST00000429746 CWC27Q6UX04 472 aaKnown RBP20.8■□□□□ 0.92
CTSD-203ENST00000429746 TMEM179Q6ZVK1 233 aa20.8■□□□□ 0.92
CTSD-203ENST00000429746 OTOP1Q7RTM1 612 aa20.8■□□□□ 0.92
CTSD-203ENST00000429746 NKX2-3Q8TAU0 364 aa20.8■□□□□ 0.92
CTSD-203ENST00000429746 KIAA1683Q9H0B3 1180 aa20.8■□□□□ 0.92
CTSD-203ENST00000429746 NAPBQ9H115 298 aa20.8■□□□□ 0.92
CTSD-203ENST00000429746 ANAPC4Q9UJX5 808 aa20.8■□□□□ 0.92
CTSD-203ENST00000429746 TRIM17Q9Y577 477 aa20.8■□□□□ 0.92
CTSD-203ENST00000429746 KIAA0100Q14667 2235 aaKnown RBP20.8■□□□□ 0.92
CTSD-203ENST00000429746 C19orf81C9J6K1 198 aa20.79■□□□□ 0.92
CTSD-203ENST00000429746 FGRP09769 529 aa20.79■□□□□ 0.92
CTSD-203ENST00000429746 HOXA7P31268 230 aaPredicted RBP20.79■□□□□ 0.92
CTSD-203ENST00000429746 CCDC17Q96LX7 622 aa20.79■□□□□ 0.92
CTSD-203ENST00000429746 INCENPQ9NQS7 918 aa20.79■□□□□ 0.92
CTSD-203ENST00000429746 MGAMO43451 1857 aa20.79■□□□□ 0.92
CTSD-203ENST00000429746 PLIN4Q96Q06 1357 aa20.78■□□□□ 0.92
CTSD-203ENST00000429746 PRDM1O75626 825 aa20.78■□□□□ 0.92
CTSD-203ENST00000429746 CHMLP26374 656 aa20.78■□□□□ 0.92
CTSD-203ENST00000429746 AMOTL1Q8IY63 956 aa20.78■□□□□ 0.92
CTSD-203ENST00000429746 STK11IPQ8N1F8 1099 aa20.78■□□□□ 0.92
CTSD-203ENST00000429746 NACAP1Q9BZK3 213 aa20.78■□□□□ 0.92
CTSD-203ENST00000429746 EFCC1Q9HA90 598 aa20.78■□□□□ 0.92
CTSD-203ENST00000429746 CABP5Q9NP86 173 aa20.78■□□□□ 0.92
CTSD-203ENST00000429746 CPA4Q9UI42 421 aa20.78■□□□□ 0.92
CTSD-203ENST00000429746 MYH4Q9Y623 1939 aa20.77■□□□□ 0.92
CTSD-203ENST00000429746 CENPBP07199 599 aaPredicted RBP20.77■□□□□ 0.92
CTSD-203ENST00000429746 CTDSPL2Q05D32 466 aa20.77■□□□□ 0.92
CTSD-203ENST00000429746 CD99L2Q8TCZ2 262 aa20.77■□□□□ 0.92
CTSD-203ENST00000429746 PARK7Q99497 189 aaKnown RBP20.77■□□□□ 0.92
CTSD-203ENST00000429746 ARHGAP39Q9C0H5 1083 aa20.77■□□□□ 0.92
CTSD-203ENST00000429746 ASCC2Q9H1I8 757 aaPredicted RBP20.77■□□□□ 0.92
CTSD-203ENST00000429746 DIAPH3Q9NSV4 1193 aa20.77■□□□□ 0.92
CTSD-203ENST00000429746 A0A0G2JMZ2 1700 aa20.77■□□□□ 0.92
CTSD-203ENST00000429746 HIP1O00291 1037 aa20.76■□□□□ 0.91
CTSD-203ENST00000429746 MPHOSPH10O00566 681 aaKnown RBP20.76■□□□□ 0.91
CTSD-203ENST00000429746 USP17L2Q6R6M4 530 aa20.76■□□□□ 0.91
CTSD-203ENST00000429746 CCDC136Q96JN2 1154 aa20.76■□□□□ 0.91
CTSD-203ENST00000429746 PTPN22Q9Y2R2 807 aa20.76■□□□□ 0.91
CTSD-203ENST00000429746 TMX2Q9Y320 296 aa20.76■□□□□ 0.91
CTSD-203ENST00000429746 BRCA2P51587 3418 aa20.75■□□□□ 0.91
CTSD-203ENST00000429746 DOCK3Q8IZD9 2030 aa20.75■□□□□ 0.91
CTSD-203ENST00000429746 GNRH1P01148 92 aa20.75■□□□□ 0.91
CTSD-203ENST00000429746 VCAM1P19320 739 aa20.75■□□□□ 0.91
CTSD-203ENST00000429746 EEF2P13639 858 aaKnown RBP20.74■□□□□ 0.91
CTSD-203ENST00000429746 SOX10P56693 466 aa20.74■□□□□ 0.91
CTSD-203ENST00000429746 LACTBP83111 547 aaPredicted RBP20.74■□□□□ 0.91
CTSD-203ENST00000429746 ICA1Q05084 483 aa20.74■□□□□ 0.91
CTSD-203ENST00000429746 KIF22Q14807 665 aa20.74■□□□□ 0.91
CTSD-203ENST00000429746 ZYXQ15942 572 aaKnown RBP20.74■□□□□ 0.91
CTSD-203ENST00000429746 TBC1D10CQ8IV04 446 aa20.74■□□□□ 0.91
CTSD-203ENST00000429746 PEX10O60683 326 aa20.73■□□□□ 0.91
CTSD-203ENST00000429746 BMP2KLQ5H9B9 411 aa20.73■□□□□ 0.91
CTSD-203ENST00000429746 NEDD1Q8NHV4 660 aa20.73■□□□□ 0.91
CTSD-203ENST00000429746 P2RX7Q99572 595 aaKnown RBP20.73■□□□□ 0.91
CTSD-203ENST00000429746 DSCC1Q9BVC3 393 aa20.73■□□□□ 0.91
CTSD-203ENST00000429746 PLXNB2O15031 1838 aa20.73■□□□□ 0.91
CTSD-203ENST00000429746 RAD50Q92878 1312 aa20.73■□□□□ 0.91
CTSD-203ENST00000429746 SGSM2O43147 1006 aa20.72■□□□□ 0.91
CTSD-203ENST00000429746 ORC4O43929 436 aa20.72■□□□□ 0.91
CTSD-203ENST00000429746 NOVP48745 357 aa20.72■□□□□ 0.91
CTSD-203ENST00000429746 USP14P54578 494 aa20.72■□□□□ 0.91
CTSD-203ENST00000429746 PRMT2P55345 433 aa20.72■□□□□ 0.91
CTSD-203ENST00000429746 ERICH6BQ5W0A0 696 aa20.72■□□□□ 0.91
CTSD-203ENST00000429746 KANSL2Q9H9L4 492 aa20.72■□□□□ 0.91
CTSD-203ENST00000429746 MKNK2Q9HBH9 465 aa20.72■□□□□ 0.91
CTSD-203ENST00000429746 TXNRD2Q9NNW7 524 aa20.72■□□□□ 0.91
CTSD-203ENST00000429746 TMOD4Q9NZQ9 345 aa20.72■□□□□ 0.91
CTSD-203ENST00000429746 NEFLP07196 543 aa20.71■□□□□ 0.91
CTSD-203ENST00000429746 HAND2P61296 217 aa20.71■□□□□ 0.91
CTSD-203ENST00000429746 PTH1RQ03431 593 aa20.71■□□□□ 0.91
CTSD-203ENST00000429746 FAM47AQ5JRC9 791 aa20.71■□□□□ 0.91
CTSD-203ENST00000429746 CATSPERGQ6ZRH7 1159 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms