RNA–Protein interactions for RNA: ENST00000429534.1

SEC13P1-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component pseudogene 1, humanhuman

BASIC

Gene SEC13P1, Length 948 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13P1-201ENST00000429534 GUCY1A2P33402 732 aa13.15□□□□□ -0.3
SEC13P1-201ENST00000429534 NT5C2P49902 561 aa13.15□□□□□ -0.3
SEC13P1-201ENST00000429534 HMGCS2P54868 508 aa13.15□□□□□ -0.3
SEC13P1-201ENST00000429534 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
SEC13P1-201ENST00000429534 MTMR2Q13614 643 aa13.15□□□□□ -0.3
SEC13P1-201ENST00000429534 SHROOM1Q2M3G4 852 aaPredicted RBP13.15□□□□□ -0.3
SEC13P1-201ENST00000429534 PPP4R3BQ5MIZ7 849 aa13.15□□□□□ -0.3
SEC13P1-201ENST00000429534 GPAT2Q6NUI2 795 aa13.15□□□□□ -0.3
SEC13P1-201ENST00000429534 USP17L2Q6R6M4 530 aa13.15□□□□□ -0.3
SEC13P1-201ENST00000429534 FEZ1Q99689 392 aa13.15□□□□□ -0.3
SEC13P1-201ENST00000429534 SH2D4AQ9H788 454 aa13.15□□□□□ -0.3
SEC13P1-201ENST00000429534 ARHGEF10LQ9HCE6 1279 aa13.15□□□□□ -0.3
SEC13P1-201ENST00000429534 TSKSQ9UJT2 592 aa13.15□□□□□ -0.3
SEC13P1-201ENST00000429534 CEP350Q5VT06 3117 aa13.14□□□□□ -0.31
SEC13P1-201ENST00000429534 FOCADQ5VW36 1801 aa13.14□□□□□ -0.31
SEC13P1-201ENST00000429534 GPR25O00155 361 aa13.14□□□□□ -0.31
SEC13P1-201ENST00000429534 FGRP09769 529 aa13.14□□□□□ -0.31
SEC13P1-201ENST00000429534 CRHR2Q13324 411 aa13.14□□□□□ -0.31
SEC13P1-201ENST00000429534 KIAA1211Q6ZU35 1233 aa13.14□□□□□ -0.31
SEC13P1-201ENST00000429534 STK11IPQ8N1F8 1099 aa13.14□□□□□ -0.31
SEC13P1-201ENST00000429534 C12orf42Q96LP6 360 aa13.14□□□□□ -0.31
SEC13P1-201ENST00000429534 PARK7Q99497 189 aaKnown RBP13.14□□□□□ -0.31
SEC13P1-201ENST00000429534 RNF41Q9H4P4 317 aaPredicted RBP13.14□□□□□ -0.31
SEC13P1-201ENST00000429534 PNMA3Q9UL41 463 aa13.14□□□□□ -0.31
SEC13P1-201ENST00000429534 ORC4O43929 436 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 TLR2O60603 784 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 PRDM1O75626 825 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 TSPY3P0CV98 308 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 TSPY8P0CW00 308 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 OSBPP22059 807 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 HOXA7P31268 230 aaPredicted RBP13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 ICA1Q05084 483 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 CTDSPL2Q05D32 466 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 IMMTQ16891 758 aaKnown RBP13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 NEDD1Q8NHV4 660 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 EMILIN3Q9NT22 766 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 NYAP2Q9P242 653 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 TMX2Q9Y320 296 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 AK9Q5TCS8 1911 aa13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 DDX60LQ5H9U9 1706 aaKnown RBP13.13□□□□□ -0.31
SEC13P1-201ENST00000429534 FKTNO75072 461 aa13.12□□□□□ -0.31
SEC13P1-201ENST00000429534 CDC45O75419 566 aa13.12□□□□□ -0.31
SEC13P1-201ENST00000429534 TFAP4Q01664 338 aa13.12□□□□□ -0.31
SEC13P1-201ENST00000429534 ARHGEF6Q15052 776 aa13.12□□□□□ -0.31
SEC13P1-201ENST00000429534 AKNAD1Q5T1N1 836 aa13.12□□□□□ -0.31
SEC13P1-201ENST00000429534 MFSD6Q6ZSS7 791 aa13.12□□□□□ -0.31
SEC13P1-201ENST00000429534 ACER1Q8TDN7 264 aa13.12□□□□□ -0.31
SEC13P1-201ENST00000429534 STAG1Q8WVM7 1258 aa13.12□□□□□ -0.31
SEC13P1-201ENST00000429534 LPAR1Q92633 364 aa13.12□□□□□ -0.31
SEC13P1-201ENST00000429534 SYNPO2Q9UMS6 1093 aa13.12□□□□□ -0.31
SEC13P1-201ENST00000429534 OTOFQ9HC10 1997 aa13.12□□□□□ -0.31
SEC13P1-201ENST00000429534 MYH7P12883 1935 aa13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 A0A1W2PRG0 241 aa13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 TSPY2A6NKD2 308 aa13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 EEF2P13639 858 aaKnown RBP13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 SP3Q02447 781 aa13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 TREML2Q5T2D2 321 aa13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 SIAH1Q8IUQ4 282 aa13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 SMCR8Q8TEV9 937 aaPredicted RBP13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 ZNF296Q8WUU4 475 aaPredicted RBP13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 ESYT1Q9BSJ8 1104 aa13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 IL25Q9H293 177 aa13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 R3HDMLQ9H3Y0 253 aa13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 TOMM22Q9NS69 142 aa13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 MTMR4Q9NYA4 1195 aa13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 SIPA1L1O43166 1804 aa13.11□□□□□ -0.31
SEC13P1-201ENST00000429534 NAV1Q8NEY1 1877 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 IGKV6D-41A0A0C4DH26 115 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 USP17L15C9J2P7 530 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 USP17L13C9JLJ4 530 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 USP17L11C9JVI0 530 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 USP17L18D6R9N7 530 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 USP17L22D6RA61 530 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 USP17L17D6RBQ6 530 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 USP17L19D6RCP7 530 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 USP17L20D6RJB6 530 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 RANBP6O60518 1105 aaKnown RBP13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 TTLL1O95922 423 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 GCLCP48506 637 aaPredicted RBP13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 HAND2P61296 217 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 ATP2B2Q01814 1243 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 USP17L24Q0WX57 530 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 ZYXQ15942 572 aaKnown RBP13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 FAM47AQ5JRC9 791 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 C17orf99Q6UX52 265 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 GTF3C2Q8WUA4 911 aaPredicted RBP13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 ESR2Q92731 530 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 MAP4K1Q92918 833 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 MKL1Q969V6 931 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 ERO1AQ96HE7 468 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 ASCC2Q9H1I8 757 aaPredicted RBP13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 VCPKMTQ9H867 229 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 GOPCQ9HD26 462 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 CLIP2Q9UDT6 1046 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 CDK5RAP2Q96SN8 1893 aa13.1□□□□□ -0.31
SEC13P1-201ENST00000429534 MYH1P12882 1939 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms