RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 USP38Q8NB14 1042 aa10.07□□□□□ -0.8
ITSN1-216ENST00000428240 TRIM43Q96BQ3 446 aaPredicted RBP10.07□□□□□ -0.8
ITSN1-216ENST00000428240 MEIS3Q99687 375 aa10.07□□□□□ -0.8
ITSN1-216ENST00000428240 PDLIM7Q9NR12 457 aa10.07□□□□□ -0.8
ITSN1-216ENST00000428240 LRP2BPQ9P2M1 347 aa10.07□□□□□ -0.8
ITSN1-216ENST00000428240 RAPGEFL1Q9UHV5 662 aa10.07□□□□□ -0.8
ITSN1-216ENST00000428240 USP17L15C9J2P7 530 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 USP17L13C9JLJ4 530 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 USP17L11C9JVI0 530 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 USP17L18D6R9N7 530 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 USP17L22D6RA61 530 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 USP17L17D6RBQ6 530 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 USP17L19D6RCP7 530 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 USP17L20D6RJB6 530 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 SRGAP3O43295 1099 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 GLRX3O76003 335 aaKnown RBP10.06□□□□□ -0.8
ITSN1-216ENST00000428240 GH2P01242 217 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 EPHB4P54760 987 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 CCNA1P78396 465 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 USP17L24Q0WX57 530 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 SNX17Q15036 470 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 GORABQ5T7V8 394 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 CATSPERGQ6ZRH7 1159 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 C12orf42Q96LP6 360 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 TRIM34Q9BYJ4 488 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 SMC4Q9NTJ3 1288 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 GINM1Q9NU53 330 aa10.06□□□□□ -0.8
ITSN1-216ENST00000428240 SAP30BPQ9UHR5 308 aaKnown RBP10.06□□□□□ -0.8
ITSN1-216ENST00000428240 KBTBD13C9JR72 458 aa10.05□□□□□ -0.8
ITSN1-216ENST00000428240 BAG3O95817 575 aa10.05□□□□□ -0.8
ITSN1-216ENST00000428240 MYCNP04198 464 aaPredicted RBP10.05□□□□□ -0.8
ITSN1-216ENST00000428240 VCAM1P19320 739 aa10.05□□□□□ -0.8
ITSN1-216ENST00000428240 ADCYAP1R1P41586 468 aa10.05□□□□□ -0.8
ITSN1-216ENST00000428240 PPP4CP60510 307 aa10.05□□□□□ -0.8
ITSN1-216ENST00000428240 GRIN2CQ14957 1233 aa10.05□□□□□ -0.8
ITSN1-216ENST00000428240 ALDH1L2Q3SY69 923 aa10.05□□□□□ -0.8
ITSN1-216ENST00000428240 TJAP1Q5JTD0 557 aa10.05□□□□□ -0.8
ITSN1-216ENST00000428240 NAA16Q6N069 864 aaPredicted RBP10.05□□□□□ -0.8
ITSN1-216ENST00000428240 ARRDC4Q8NCT1 418 aa10.05□□□□□ -0.8
ITSN1-216ENST00000428240 FERMT2Q96AC1 680 aa10.05□□□□□ -0.8
ITSN1-216ENST00000428240 NOL10Q9BSC4 688 aaKnown RBP10.05□□□□□ -0.8
ITSN1-216ENST00000428240 SNRKQ9NRH2 765 aa10.05□□□□□ -0.8
ITSN1-216ENST00000428240 NOB1Q9ULX3 412 aaKnown RBP10.05□□□□□ -0.8
ITSN1-216ENST00000428240 IVNS1ABPQ9Y6Y0 642 aa10.05□□□□□ -0.8
ITSN1-216ENST00000428240 SPDYE16A6NNV3 312 aaPredicted RBP10.04□□□□□ -0.8
ITSN1-216ENST00000428240 E9PSI1 815 aa10.04□□□□□ -0.8
ITSN1-216ENST00000428240 TNFRSF10AO00220 468 aa10.04□□□□□ -0.8
ITSN1-216ENST00000428240 PLCG2P16885 1265 aa10.04□□□□□ -0.8
ITSN1-216ENST00000428240 DYNLL1P63167 89 aaKnown RBP10.04□□□□□ -0.8
ITSN1-216ENST00000428240 PRAMEF19Q5SWL8 479 aa10.04□□□□□ -0.8
ITSN1-216ENST00000428240 LBX2Q6XYB7 198 aa10.04□□□□□ -0.8
ITSN1-216ENST00000428240 DPP9Q86TI2 863 aa10.04□□□□□ -0.8
ITSN1-216ENST00000428240 ACER1Q8TDN7 264 aa10.04□□□□□ -0.8
ITSN1-216ENST00000428240 RNPC3Q96LT9 517 aaKnown RBP10.04□□□□□ -0.8
ITSN1-216ENST00000428240 FEZ1Q99689 392 aa10.04□□□□□ -0.8
ITSN1-216ENST00000428240 RLFQ13129 1914 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 TMEM265A0A087WTH1 108 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 SEPT4O43236 478 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 COBLO75128 1261 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 CYP2E1P05181 493 aaPredicted RBP10.03□□□□□ -0.8
ITSN1-216ENST00000428240 HLA-DOAP06340 250 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 ADORA2AP29274 412 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 TLE2Q04725 743 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 SLFN5Q08AF3 891 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 MTX1Q13505 466 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 RAB3GAP1Q15042 981 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 LRRC41Q15345 812 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 C1orf53Q5VUE5 145 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 OLFML2BQ68BL8 750 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 TATDN1Q6P1N9 297 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 MOV10L1Q9BXT6 1211 aaKnown RBP10.03□□□□□ -0.8
ITSN1-216ENST00000428240 KIAA1683Q9H0B3 1180 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 RPAP3Q9H6T3 665 aaPredicted RBP10.03□□□□□ -0.8
ITSN1-216ENST00000428240 HDAC5Q9UQL6 1122 aa10.03□□□□□ -0.8
ITSN1-216ENST00000428240 XIRP2A4UGR9 3374 aa10.02□□□□□ -0.81
ITSN1-216ENST00000428240 ANP32CO43423 234 aa10.02□□□□□ -0.81
ITSN1-216ENST00000428240 UQCRFS1P1P0C7P4 283 aa10.02□□□□□ -0.81
ITSN1-216ENST00000428240 DNAJB2P25686 324 aa10.02□□□□□ -0.81
ITSN1-216ENST00000428240 USP14P54578 494 aa10.02□□□□□ -0.81
ITSN1-216ENST00000428240 FAM47AQ5JRC9 791 aa10.02□□□□□ -0.81
ITSN1-216ENST00000428240 CDCA7LQ96GN5 454 aa10.02□□□□□ -0.81
ITSN1-216ENST00000428240 PNMA6EA0A0J9YXQ4 647 aa10.01□□□□□ -0.81
ITSN1-216ENST00000428240 CLTBP09497 229 aa10.01□□□□□ -0.81
ITSN1-216ENST00000428240 ERCC3P19447 782 aa10.01□□□□□ -0.81
ITSN1-216ENST00000428240 ATF7IPQ6VMQ6 1270 aa10.01□□□□□ -0.81
ITSN1-216ENST00000428240 MIGA1Q8NAN2 632 aa10.01□□□□□ -0.81
ITSN1-216ENST00000428240 PPM1EQ8WY54 764 aa10.01□□□□□ -0.81
ITSN1-216ENST00000428240 SPATC1LQ9H0A9 340 aa10.01□□□□□ -0.81
ITSN1-216ENST00000428240 PIH1D3Q9NQM4 214 aaKnown RBP10.01□□□□□ -0.81
ITSN1-216ENST00000428240 TACC3Q9Y6A5 838 aa10.01□□□□□ -0.81
ITSN1-216ENST00000428240 CDK5RAP2Q96SN8 1893 aa10□□□□□ -0.81
ITSN1-216ENST00000428240 HSFX4A0A1B0GTS1 333 aaPredicted RBP10□□□□□ -0.81
ITSN1-216ENST00000428240 HSFX3A0A1B0GWH4 333 aaPredicted RBP10□□□□□ -0.81
ITSN1-216ENST00000428240 A0A1W2PRG0 241 aa10□□□□□ -0.81
ITSN1-216ENST00000428240 KIAA0355O15063 1070 aa10□□□□□ -0.81
ITSN1-216ENST00000428240 STRNO43815 780 aa10□□□□□ -0.81
ITSN1-216ENST00000428240 PQBP1O60828 265 aaKnown RBP10□□□□□ -0.81
ITSN1-216ENST00000428240 RAG1P15918 1043 aa10□□□□□ -0.81
ITSN1-216ENST00000428240 GUCY1A2P33402 732 aa10□□□□□ -0.81
ITSN1-216ENST00000428240 ZAP70P43403 619 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms