RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 RASGRP2Q7LDG7 609 aa14.11□□□□□ -0.15
RFC4-206ENST00000427785 CATIPQ7Z7H3 387 aa14.11□□□□□ -0.15
RFC4-206ENST00000427785 METTL16Q86W50 562 aaKnown RBP14.11□□□□□ -0.15
RFC4-206ENST00000427785 FOXP4Q8IVH2 680 aaPredicted RBP14.11□□□□□ -0.15
RFC4-206ENST00000427785 DDX11Q96FC9 970 aa14.11□□□□□ -0.15
RFC4-206ENST00000427785 TEPSINQ96N21 525 aa14.11□□□□□ -0.15
RFC4-206ENST00000427785 KAT14Q9H8E8 782 aa14.11□□□□□ -0.15
RFC4-206ENST00000427785 CWC22Q9HCG8 908 aaKnown RBP14.11□□□□□ -0.15
RFC4-206ENST00000427785 TCP11L1Q9NUJ3 509 aa14.11□□□□□ -0.15
RFC4-206ENST00000427785 PGAP2Q9UHJ9 254 aa14.11□□□□□ -0.15
RFC4-206ENST00000427785 HERC5Q9UII4 1024 aaKnown RBP14.11□□□□□ -0.15
RFC4-206ENST00000427785 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
RFC4-206ENST00000427785 STX8Q9UNK0 236 aa14.11□□□□□ -0.15
RFC4-206ENST00000427785 MTMR7Q9Y216 660 aa14.11□□□□□ -0.15
RFC4-206ENST00000427785 IGKV6D-41A0A0C4DH26 115 aa14.1□□□□□ -0.15
RFC4-206ENST00000427785 CPLX1O14810 134 aa14.1□□□□□ -0.15
RFC4-206ENST00000427785 FOSBP53539 338 aa14.1□□□□□ -0.15
RFC4-206ENST00000427785 CERKLQ49MI3 558 aaPredicted RBP14.1□□□□□ -0.15
RFC4-206ENST00000427785 CCDC178Q5BJE1 867 aa14.1□□□□□ -0.15
RFC4-206ENST00000427785 MIGA2Q7L4E1 593 aa14.1□□□□□ -0.15
RFC4-206ENST00000427785 LRRC47Q8N1G4 583 aaKnown RBP14.1□□□□□ -0.15
RFC4-206ENST00000427785 TMTC2Q8N394 836 aa14.1□□□□□ -0.15
RFC4-206ENST00000427785 CHMP4CQ96CF2 233 aa14.1□□□□□ -0.15
RFC4-206ENST00000427785 PTPRFP10586 1907 aa14.09□□□□□ -0.15
RFC4-206ENST00000427785 GLTPD2A6NH11 291 aa14.09□□□□□ -0.15
RFC4-206ENST00000427785 RCAN1P53805 252 aa14.09□□□□□ -0.15
RFC4-206ENST00000427785 JAG1P78504 1218 aa14.09□□□□□ -0.15
RFC4-206ENST00000427785 FOXD4L5Q5VV16 416 aaPredicted RBP14.09□□□□□ -0.15
RFC4-206ENST00000427785 TATDN1Q6P1N9 297 aa14.09□□□□□ -0.15
RFC4-206ENST00000427785 DGKHQ86XP1 1220 aa14.09□□□□□ -0.15
RFC4-206ENST00000427785 PNMA1Q8ND90 353 aa14.09□□□□□ -0.15
RFC4-206ENST00000427785 SMARCC2Q8TAQ2 1214 aa14.09□□□□□ -0.15
RFC4-206ENST00000427785 FOXD4L4Q8WXT5 416 aaPredicted RBP14.09□□□□□ -0.15
RFC4-206ENST00000427785 CCDC17Q96LX7 622 aa14.09□□□□□ -0.15
RFC4-206ENST00000427785 TMEM47Q9BQJ4 181 aa14.09□□□□□ -0.15
RFC4-206ENST00000427785 LLPHQ9BRT6 129 aaKnown RBP14.09□□□□□ -0.15
RFC4-206ENST00000427785 DEFB129Q9H1M3 183 aa14.09□□□□□ -0.15
RFC4-206ENST00000427785 FAM217BQ9NTX9 383 aaPredicted RBP14.09□□□□□ -0.15
RFC4-206ENST00000427785 GH2P01242 217 aa14.08□□□□□ -0.16
RFC4-206ENST00000427785 EPHX2P34913 555 aa14.08□□□□□ -0.16
RFC4-206ENST00000427785 ADD1P35611 737 aaKnown RBP14.08□□□□□ -0.16
RFC4-206ENST00000427785 ATP2B2Q01814 1243 aa14.08□□□□□ -0.16
RFC4-206ENST00000427785 TROAPQ12815 778 aa14.08□□□□□ -0.16
RFC4-206ENST00000427785 SEPT2Q15019 361 aa14.08□□□□□ -0.16
RFC4-206ENST00000427785 ABCB5Q2M3G0 1257 aa14.08□□□□□ -0.16
RFC4-206ENST00000427785 PRAMEF18Q5VWM3 479 aa14.08□□□□□ -0.16
RFC4-206ENST00000427785 ANKS1AQ92625 1134 aa14.08□□□□□ -0.16
RFC4-206ENST00000427785 MTMR4Q9NYA4 1195 aa14.08□□□□□ -0.16
RFC4-206ENST00000427785 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.08□□□□□ -0.16
RFC4-206ENST00000427785 TAOK2Q9UL54 1235 aa14.08□□□□□ -0.16
RFC4-206ENST00000427785 SRCAPQ6ZRS2 3230 aa14.08□□□□□ -0.16
RFC4-206ENST00000427785 PITPNM2Q9BZ72 1349 aa14.08□□□□□ -0.16
RFC4-206ENST00000427785 PARP14Q460N5 1801 aa14.07□□□□□ -0.16
RFC4-206ENST00000427785 ADM5C9JUS6 153 aa14.07□□□□□ -0.16
RFC4-206ENST00000427785 DHX16O60231 1041 aaKnown RBP14.07□□□□□ -0.16
RFC4-206ENST00000427785 PLEKHA8P1O95397 391 aa14.07□□□□□ -0.16
RFC4-206ENST00000427785 CALM1P0DP23 149 aa14.07□□□□□ -0.16
RFC4-206ENST00000427785 CALM2P0DP24 149 aa14.07□□□□□ -0.16
RFC4-206ENST00000427785 CALM3P0DP25 149 aa14.07□□□□□ -0.16
RFC4-206ENST00000427785 TOP1P11387 765 aaKnown RBP14.07□□□□□ -0.16
RFC4-206ENST00000427785 GUCY1A2P33402 732 aa14.07□□□□□ -0.16
RFC4-206ENST00000427785 ICA1Q05084 483 aa14.07□□□□□ -0.16
RFC4-206ENST00000427785 RAB3GAP1Q15042 981 aa14.07□□□□□ -0.16
RFC4-206ENST00000427785 NBPF12Q5TAG4 269 aaPredicted RBP14.07□□□□□ -0.16
RFC4-206ENST00000427785 TMEM179Q6ZVK1 233 aa14.07□□□□□ -0.16
RFC4-206ENST00000427785 CMTR1Q8N1G2 835 aaKnown RBP14.07□□□□□ -0.16
RFC4-206ENST00000427785 FANCBQ8NB91 859 aa14.07□□□□□ -0.16
RFC4-206ENST00000427785 CTCFLQ8NI51 663 aaPredicted RBP14.07□□□□□ -0.16
RFC4-206ENST00000427785 PHKBQ93100 1093 aa14.07□□□□□ -0.16
RFC4-206ENST00000427785 ZBTB21Q9ULJ3 1066 aa14.07□□□□□ -0.16
RFC4-206ENST00000427785 UTRNP46939 3433 aa14.06□□□□□ -0.16
RFC4-206ENST00000427785 TBC1D12O60347 775 aa14.06□□□□□ -0.16
RFC4-206ENST00000427785 CDKL5O76039 1030 aa14.06□□□□□ -0.16
RFC4-206ENST00000427785 TTLL1O95922 423 aa14.06□□□□□ -0.16
RFC4-206ENST00000427785 NOVP48745 357 aa14.06□□□□□ -0.16
RFC4-206ENST00000427785 HMGN5P82970 282 aaKnown RBP14.06□□□□□ -0.16
RFC4-206ENST00000427785 GRM4Q14833 912 aa14.06□□□□□ -0.16
RFC4-206ENST00000427785 NTRK3Q16288 839 aa14.06□□□□□ -0.16
RFC4-206ENST00000427785 EAPPQ56P03 285 aaPredicted RBP14.06□□□□□ -0.16
RFC4-206ENST00000427785 CPLX2Q6PUV4 134 aaKnown RBP14.06□□□□□ -0.16
RFC4-206ENST00000427785 FAM184AQ8NB25 1140 aa14.06□□□□□ -0.16
RFC4-206ENST00000427785 SLC26A6Q9BXS9 759 aa14.06□□□□□ -0.16
RFC4-206ENST00000427785 ORC3Q9UBD5 711 aaPredicted RBP14.06□□□□□ -0.16
RFC4-206ENST00000427785 ZDHHC9Q9Y397 364 aa14.06□□□□□ -0.16
RFC4-206ENST00000427785 PPP2R3BQ9Y5P8 575 aa14.06□□□□□ -0.16
RFC4-206ENST00000427785 CNTNAP5Q8WYK1 1306 aa14.06□□□□□ -0.16
RFC4-206ENST00000427785 VPS37CA5D8V6 355 aaPredicted RBP14.05□□□□□ -0.16
RFC4-206ENST00000427785 UBE2Q2LH0YL09 131 aa14.05□□□□□ -0.16
RFC4-206ENST00000427785 FDPSP14324 419 aaKnown RBP14.05□□□□□ -0.16
RFC4-206ENST00000427785 SYT1P21579 422 aa14.05□□□□□ -0.16
RFC4-206ENST00000427785 NUCB2P80303 420 aa14.05□□□□□ -0.16
RFC4-206ENST00000427785 DLK2Q6UY11 383 aa14.05□□□□□ -0.16
RFC4-206ENST00000427785 TMTC3Q6ZXV5 915 aa14.05□□□□□ -0.16
RFC4-206ENST00000427785 USP50Q70EL3 339 aaPredicted RBP14.05□□□□□ -0.16
RFC4-206ENST00000427785 CDC37L1Q7L3B6 337 aa14.05□□□□□ -0.16
RFC4-206ENST00000427785 DCPSQ96C86 337 aaKnown RBP14.05□□□□□ -0.16
RFC4-206ENST00000427785 TAF1DQ9H5J8 278 aaPredicted RBP14.05□□□□□ -0.16
RFC4-206ENST00000427785 CABP5Q9NP86 173 aa14.05□□□□□ -0.16
RFC4-206ENST00000427785 RBM28Q9NW13 759 aaKnown RBP14.05□□□□□ -0.16
RFC4-206ENST00000427785 CLIP2Q9UDT6 1046 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms