RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 HMGCS2P54868 508 aa11.11□□□□□ -0.63
RFX3-AS1-202ENST00000427722 MTMR2Q13614 643 aa11.11□□□□□ -0.63
RFX3-AS1-202ENST00000427722 TREML2Q5T2D2 321 aa11.11□□□□□ -0.63
RFX3-AS1-202ENST00000427722 ANKRD45Q5TZF3 282 aa11.11□□□□□ -0.63
RFX3-AS1-202ENST00000427722 ZSCAN25Q6NSZ9 544 aa11.11□□□□□ -0.63
RFX3-AS1-202ENST00000427722 KBTBD3Q8NAB2 608 aa11.11□□□□□ -0.63
RFX3-AS1-202ENST00000427722 TBC1D2Q9BYX2 928 aa11.11□□□□□ -0.63
RFX3-AS1-202ENST00000427722 ARHGAP39Q9C0H5 1083 aa11.11□□□□□ -0.63
RFX3-AS1-202ENST00000427722 AS3MTQ9HBK9 375 aa11.11□□□□□ -0.63
RFX3-AS1-202ENST00000427722 DCP1AQ9NPI6 582 aaPredicted RBP11.11□□□□□ -0.63
RFX3-AS1-202ENST00000427722 AGTPBP1Q9UPW5 1226 aa11.11□□□□□ -0.63
RFX3-AS1-202ENST00000427722 TTC41PQ6P2S7 1318 aa11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 ERC2O15083 957 aa11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 GLRX3O76003 335 aaKnown RBP11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 GH2P01242 217 aa11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 SOX10P56693 466 aa11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 LACTBP83111 547 aaPredicted RBP11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 KIF22Q14807 665 aa11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 PI4K2BQ8TCG2 481 aa11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 SMCR8Q8TEV9 937 aaPredicted RBP11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 GCC1Q96CN9 775 aa11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 PUS7LQ9H0K6 701 aaKnown RBP11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 GPHNQ9NQX3 736 aaPredicted RBP11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 SUPT16HQ9Y5B9 1047 aaKnown RBP11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 SLC4A4Q9Y6R1 1079 aa11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 LAMB1P07942 1786 aa11.1□□□□□ -0.63
RFX3-AS1-202ENST00000427722 DOCK1Q14185 1865 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 SLC34A2O95436 690 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 SHMT1P34896 483 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 AAMPQ13685 434 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 RAB3GAP1Q15042 981 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 C17orf99Q6UX52 265 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 PROCA1Q8NCQ7 364 aaPredicted RBP11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 SLC44A5Q8NCS7 719 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 APPBP2Q92624 585 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 DDRGK1Q96HY6 314 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 FEZ1Q99689 392 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 FSD1Q9BTV5 496 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 WDR18Q9BV38 432 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 GINM1Q9NU53 330 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 TMOD4Q9NZQ9 345 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 SLC45A1Q9Y2W3 748 aa11.09□□□□□ -0.63
RFX3-AS1-202ENST00000427722 AK9Q5TCS8 1911 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 SIPA1L1O43166 1804 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 CYP2D7A0A087X1C5 515 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 RNF113AO15541 343 aaKnown RBP11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 BCRP11274 1271 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 BACE1P56817 501 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 IRX6P78412 446 aaPredicted RBP11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 GABPAQ06546 454 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 ARHGEF6Q15052 776 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 ABCB5Q2M3G0 1257 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 CERKLQ49MI3 558 aaPredicted RBP11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 TATDN1Q6P1N9 297 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 AMOTL1Q8IY63 956 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 DYNLL2Q96FJ2 89 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 LNPKQ9C0E8 428 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 ATP8A2Q9NTI2 1148 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 PNMA3Q9UL41 463 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 PTPN22Q9Y2R2 807 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 SALL3Q9BXA9 1300 aa11.08□□□□□ -0.64
RFX3-AS1-202ENST00000427722 DDX60LQ5H9U9 1706 aaKnown RBP11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 USP17L10C9JJH3 530 aa11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 M0R2C6 588 aa11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 MPHOSPH10O00566 681 aaKnown RBP11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 ZFYP08048 801 aaPredicted RBP11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 CTGFP29279 349 aa11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 PSMC4P43686 418 aa11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 FOXK1P85037 733 aa11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 PABPC4Q13310 644 aaKnown RBP eCLIP11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 ZYXQ15942 572 aaKnown RBP11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 LRRFIP1Q32MZ4 808 aaKnown RBP11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 SH3D19Q5HYK7 790 aa11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 B4GALNT3Q6L9W6 998 aa11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 KHSRPQ92945 711 aaKnown RBP eCLIP11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 OSBP2Q969R2 916 aa11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 RWDD1Q9H446 243 aaPredicted RBP11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 CABP5Q9NP86 173 aa11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 PTCH2Q9Y6C5 1203 aa11.07□□□□□ -0.64
RFX3-AS1-202ENST00000427722 MYO5AQ9Y4I1 1855 aaKnown RBP11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 USP17L12C9JPN9 530 aa11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 USP17L21D6R901 530 aa11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 SMIM22K7EJ46 135 aa11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 GPAA1O43292 621 aa11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 FMNL1O95466 1100 aaPredicted RBP11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 OSBPP22059 807 aa11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 PDE1AP54750 535 aa11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 FCGRTP55899 365 aa11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 IRX3P78415 501 aaPredicted RBP11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 SMC5Q8IY18 1101 aa11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 ANKRD13CQ8N6S4 541 aa11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 TRIM47Q96LD4 638 aa11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 STRBPQ96SI9 672 aaKnown RBP11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 ASCC2Q9H1I8 757 aaPredicted RBP11.06□□□□□ -0.64
RFX3-AS1-202ENST00000427722 C19orf81C9J6K1 198 aa11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 IGHDP01880 384 aa11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 GUCY1A2P33402 732 aa11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 SEPT2Q15019 361 aa11.05□□□□□ -0.64
RFX3-AS1-202ENST00000427722 FAM110CQ1W6H9 321 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms