RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 SLC6A19Q695T7 634 aa3.98□□□□□ -1.77
PTPRC-208ENST00000427110 REC114Q7Z4M0 266 aa3.98□□□□□ -1.77
PTPRC-208ENST00000427110 MCATQ8IVS2 390 aaKnown RBP3.98□□□□□ -1.77
PTPRC-208ENST00000427110 PPP1R13LQ8WUF5 828 aa3.98□□□□□ -1.77
PTPRC-208ENST00000427110 ASB11Q8WXH4 323 aa3.98□□□□□ -1.77
PTPRC-208ENST00000427110 ZSWIM5Q9P217 1185 aa3.98□□□□□ -1.77
PTPRC-208ENST00000427110 ADAMTS1Q9UHI8 967 aa3.98□□□□□ -1.77
PTPRC-208ENST00000427110 ADAM30Q9UKF2 790 aa3.98□□□□□ -1.77
PTPRC-208ENST00000427110 SNX11Q9Y5W9 270 aa3.98□□□□□ -1.77
PTPRC-208ENST00000427110 ST14Q9Y5Y6 855 aa3.98□□□□□ -1.77
PTPRC-208ENST00000427110 TACC3Q9Y6A5 838 aa3.98□□□□□ -1.77
PTPRC-208ENST00000427110 LRRN2O75325 713 aa3.97□□□□□ -1.77
PTPRC-208ENST00000427110 TCF3P15923 654 aa3.97□□□□□ -1.77
PTPRC-208ENST00000427110 EIF4A3P38919 411 aaKnown RBP3.97□□□□□ -1.77
PTPRC-208ENST00000427110 FAM196AQ6ZSG2 479 aa3.97□□□□□ -1.77
PTPRC-208ENST00000427110 CCDC84Q86UT8 332 aaPredicted RBP3.97□□□□□ -1.77
PTPRC-208ENST00000427110 BAHD1Q8TBE0 780 aaPredicted RBP3.97□□□□□ -1.77
PTPRC-208ENST00000427110 UBE2FQ969M7 185 aa3.97□□□□□ -1.77
PTPRC-208ENST00000427110 Q96M66 194 aa3.97□□□□□ -1.77
PTPRC-208ENST00000427110 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
PTPRC-208ENST00000427110 BRMS1Q9HCU9 246 aa3.97□□□□□ -1.77
PTPRC-208ENST00000427110 UBP1Q9NZI7 540 aa3.97□□□□□ -1.77
PTPRC-208ENST00000427110 CARMIL2Q6F5E8 1435 aa3.96□□□□□ -1.77
PTPRC-208ENST00000427110 SCAMP3O14828 347 aaKnown RBP3.96□□□□□ -1.78
PTPRC-208ENST00000427110 ZNF76P36508 570 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 ETV3P41162 512 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 TNNI2P48788 182 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 PWP1Q13610 501 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 MPP2Q14168 576 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 OGFOD2Q6N063 350 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 ZNF746Q6NUN9 644 aaPredicted RBP3.96□□□□□ -1.78
PTPRC-208ENST00000427110 SLC23A3Q6PIS1 610 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 C22orf34Q6ZV56 151 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 HS2ST1Q7LGA3 356 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 KRTAP19-1Q8IUB9 90 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 CYB5D2Q8WUJ1 264 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 ZNF296Q8WUU4 475 aaPredicted RBP3.96□□□□□ -1.78
PTPRC-208ENST00000427110 RNF34Q969K3 372 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 FMNL2Q96PY5 1086 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 KIF2CQ99661 725 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 CEP131Q9UPN4 1083 aa3.96□□□□□ -1.78
PTPRC-208ENST00000427110 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.96□□□□□ -1.78
PTPRC-208ENST00000427110 JUNBP17275 347 aaPredicted RBP3.95□□□□□ -1.78
PTPRC-208ENST00000427110 CYP7A1P22680 504 aa3.95□□□□□ -1.78
PTPRC-208ENST00000427110 POLR2BP30876 1174 aaKnown RBP3.95□□□□□ -1.78
PTPRC-208ENST00000427110 YARSP54577 528 aaKnown RBP3.95□□□□□ -1.78
PTPRC-208ENST00000427110 CWF19L2Q2TBE0 894 aaKnown RBP3.95□□□□□ -1.78
PTPRC-208ENST00000427110 SEZ6Q53EL9 994 aa3.95□□□□□ -1.78
PTPRC-208ENST00000427110 TMEM201Q5SNT2 666 aa3.95□□□□□ -1.78
PTPRC-208ENST00000427110 FYB2Q5VWT5 728 aa3.95□□□□□ -1.78
PTPRC-208ENST00000427110 C9orf131Q5VYM1 1079 aa3.95□□□□□ -1.78
PTPRC-208ENST00000427110 DIEXFQ68CQ4 756 aaKnown RBP3.95□□□□□ -1.78
PTPRC-208ENST00000427110 CREG2Q8IUH2 290 aa3.95□□□□□ -1.78
PTPRC-208ENST00000427110 PHACTR4Q8IZ21 702 aa3.95□□□□□ -1.78
PTPRC-208ENST00000427110 FAM168AQ92567 244 aa3.95□□□□□ -1.78
PTPRC-208ENST00000427110 ANTXR1Q9H6X2 564 aa3.95□□□□□ -1.78
PTPRC-208ENST00000427110 SLAMF8Q9P0V8 285 aa3.95□□□□□ -1.78
PTPRC-208ENST00000427110 SUPT16HQ9Y5B9 1047 aaKnown RBP3.95□□□□□ -1.78
PTPRC-208ENST00000427110 PCDHB14Q9Y5E9 798 aa3.95□□□□□ -1.78
PTPRC-208ENST00000427110 PCDHGB7Q9Y5F8 929 aa3.95□□□□□ -1.78
PTPRC-208ENST00000427110 PRR36Q9H6K5 1346 aa3.95□□□□□ -1.78
PTPRC-208ENST00000427110 DNAJC25-GNG10A0A024R161 153 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 SHISA3A0PJX4 238 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 GREM1O60565 184 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 ERCC5P28715 1186 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-208ENST00000427110 MCM4P33991 863 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 KIR3DL1P43629 444 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 FANCCQ00597 558 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 CLCQ05315 142 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 ZNF394Q53GI3 561 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 ARSHQ5FYA8 562 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 RALGPS1Q5JS13 557 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 GK5Q6ZS86 529 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 ATG4DQ86TL0 474 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-208ENST00000427110 SLFN12Q8IYM2 578 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 DTWD2Q8NBA8 298 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 ASIC4Q96FT7 647 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 KREMEN1Q96MU8 473 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 DUSP15Q9H1R2 295 aaPredicted RBP3.94□□□□□ -1.78
PTPRC-208ENST00000427110 KCNQ5Q9NR82 932 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 METTL5Q9NRN9 209 aaKnown RBP3.94□□□□□ -1.78
PTPRC-208ENST00000427110 C19orf73Q9NVV2 129 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 CTNND2Q9UQB3 1225 aa3.94□□□□□ -1.78
PTPRC-208ENST00000427110 FAM86C2PA6NEL3 165 aa3.93□□□□□ -1.78
PTPRC-208ENST00000427110 SLC22A31A6NKX4 558 aa3.93□□□□□ -1.78
PTPRC-208ENST00000427110 BIN1O00499 593 aa3.93□□□□□ -1.78
PTPRC-208ENST00000427110 UBOX5O94941 541 aa3.93□□□□□ -1.78
PTPRC-208ENST00000427110 ESR1P03372 595 aa3.93□□□□□ -1.78
PTPRC-208ENST00000427110 TPP2P29144 1249 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-208ENST00000427110 HK2P52789 917 aa3.93□□□□□ -1.78
PTPRC-208ENST00000427110 ERVFC1P60507 584 aa3.93□□□□□ -1.78
PTPRC-208ENST00000427110 HDLBPQ00341 1268 aaKnown RBP3.93□□□□□ -1.78
PTPRC-208ENST00000427110 APOBRQ0VD83 1088 aa3.93□□□□□ -1.78
PTPRC-208ENST00000427110 ZNF648Q5T619 568 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-208ENST00000427110 OVOS1Q6IE37 1185 aa3.93□□□□□ -1.78
PTPRC-208ENST00000427110 USP48Q86UV5 1035 aa3.93□□□□□ -1.78
PTPRC-208ENST00000427110 NT5DC4Q86YG4 428 aa3.93□□□□□ -1.78
PTPRC-208ENST00000427110 ZNF512BQ96KM6 892 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-208ENST00000427110 GOLGA2P5Q9HBQ8 144 aa3.93□□□□□ -1.78
PTPRC-208ENST00000427110 GBP1P32455 592 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms