RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 RBM28Q9NW13 759 aaKnown RBP17.61■□□□□ 0.41
GINS3-203ENST00000426538 GRIN3BO60391 1043 aa17.61■□□□□ 0.41
GINS3-203ENST00000426538 PPFIA3O75145 1194 aa17.61■□□□□ 0.41
GINS3-203ENST00000426538 ZSCAN22P10073 491 aaPredicted RBP17.61■□□□□ 0.41
GINS3-203ENST00000426538 AKR1B1P15121 316 aa17.61■□□□□ 0.41
GINS3-203ENST00000426538 TROAPQ12815 778 aa17.61■□□□□ 0.41
GINS3-203ENST00000426538 METTL16Q86W50 562 aaKnown RBP17.61■□□□□ 0.41
GINS3-203ENST00000426538 PNMA1Q8ND90 353 aa17.61■□□□□ 0.41
GINS3-203ENST00000426538 CTCFLQ8NI51 663 aaPredicted RBP17.61■□□□□ 0.41
GINS3-203ENST00000426538 CEP95Q96GE4 821 aa17.61■□□□□ 0.41
GINS3-203ENST00000426538 FAM217BQ9NTX9 383 aaPredicted RBP17.61■□□□□ 0.41
GINS3-203ENST00000426538 GPRC5DQ9NZD1 345 aa17.61■□□□□ 0.41
GINS3-203ENST00000426538 ORC3Q9UBD5 711 aaPredicted RBP17.61■□□□□ 0.41
GINS3-203ENST00000426538 HERC5Q9UII4 1024 aaKnown RBP17.61■□□□□ 0.41
GINS3-203ENST00000426538 EGFRP00533 1210 aa17.6■□□□□ 0.41
GINS3-203ENST00000426538 SSRP1Q08945 709 aaKnown RBP17.6■□□□□ 0.41
GINS3-203ENST00000426538 PPP4R3BQ5MIZ7 849 aa17.6■□□□□ 0.41
GINS3-203ENST00000426538 TATDN1Q6P1N9 297 aa17.6■□□□□ 0.41
GINS3-203ENST00000426538 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.6■□□□□ 0.41
GINS3-203ENST00000426538 MYH8P13535 1937 aa17.59■□□□□ 0.41
GINS3-203ENST00000426538 CNTNAP1P78357 1384 aa17.59■□□□□ 0.41
GINS3-203ENST00000426538 PLIN4Q96Q06 1357 aa17.59■□□□□ 0.41
GINS3-203ENST00000426538 FAM196BA6NMK8 535 aa17.59■□□□□ 0.41
GINS3-203ENST00000426538 IFNAR1P17181 557 aa17.59■□□□□ 0.41
GINS3-203ENST00000426538 NTRK3Q16288 839 aa17.59■□□□□ 0.41
GINS3-203ENST00000426538 DPY19L2Q6NUT2 758 aa17.59■□□□□ 0.41
GINS3-203ENST00000426538 TRIM22Q8IYM9 498 aa17.59■□□□□ 0.41
GINS3-203ENST00000426538 TMEM47Q9BQJ4 181 aa17.59■□□□□ 0.41
GINS3-203ENST00000426538 TMEM39BQ9GZU3 492 aa17.59■□□□□ 0.41
GINS3-203ENST00000426538 DNAJC18Q9H819 358 aa17.59■□□□□ 0.41
GINS3-203ENST00000426538 MTMR4Q9NYA4 1195 aa17.59■□□□□ 0.41
GINS3-203ENST00000426538 ATP6V1DQ9Y5K8 247 aa17.59■□□□□ 0.41
GINS3-203ENST00000426538 DDNO94850 711 aaPredicted RBP17.58■□□□□ 0.41
GINS3-203ENST00000426538 TOP1P11387 765 aaKnown RBP17.58■□□□□ 0.41
GINS3-203ENST00000426538 FDPSP14324 419 aaKnown RBP17.58■□□□□ 0.41
GINS3-203ENST00000426538 LMOD1P29536 600 aaPredicted RBP17.58■□□□□ 0.41
GINS3-203ENST00000426538 KIF5BP33176 963 aa17.58■□□□□ 0.41
GINS3-203ENST00000426538 NBR1Q14596 966 aa17.58■□□□□ 0.41
GINS3-203ENST00000426538 PHKBQ93100 1093 aa17.58■□□□□ 0.41
GINS3-203ENST00000426538 MAP3K14Q99558 947 aa17.58■□□□□ 0.41
GINS3-203ENST00000426538 MTMR6Q9Y217 621 aa17.58■□□□□ 0.41
GINS3-203ENST00000426538 TTLL1O95922 423 aa17.58■□□□□ 0.4
GINS3-203ENST00000426538 SLURP2P0DP57 97 aa17.58■□□□□ 0.4
GINS3-203ENST00000426538 RASA3Q14644 834 aa17.58■□□□□ 0.4
GINS3-203ENST00000426538 CCDC82Q8N4S0 544 aa17.58■□□□□ 0.4
GINS3-203ENST00000426538 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.58■□□□□ 0.4
GINS3-203ENST00000426538 SLC26A6Q9BXS9 759 aa17.58■□□□□ 0.4
GINS3-203ENST00000426538 HACL1Q9UJ83 578 aa17.58■□□□□ 0.4
GINS3-203ENST00000426538 F13A1P00488 732 aa17.57■□□□□ 0.4
GINS3-203ENST00000426538 AKAP17AQ02040 695 aaKnown RBP17.57■□□□□ 0.4
GINS3-203ENST00000426538 CLEC17AQ6ZS10 378 aa17.57■□□□□ 0.4
GINS3-203ENST00000426538 WASF1Q92558 559 aa17.57■□□□□ 0.4
GINS3-203ENST00000426538 CABP5Q9NP86 173 aa17.57■□□□□ 0.4
GINS3-203ENST00000426538 IGKV6D-41A0A0C4DH26 115 aa17.56■□□□□ 0.4
GINS3-203ENST00000426538 GOLGA6L22H0YM25 854 aa17.56■□□□□ 0.4
GINS3-203ENST00000426538 TBC1D12O60347 775 aa17.56■□□□□ 0.4
GINS3-203ENST00000426538 BAG4O95429 457 aaKnown RBP17.56■□□□□ 0.4
GINS3-203ENST00000426538 FMNL1O95466 1100 aaPredicted RBP17.56■□□□□ 0.4
GINS3-203ENST00000426538 EPS15P42566 896 aa17.56■□□□□ 0.4
GINS3-203ENST00000426538 NOVP48745 357 aa17.56■□□□□ 0.4
GINS3-203ENST00000426538 ABCB5Q2M3G0 1257 aa17.56■□□□□ 0.4
GINS3-203ENST00000426538 CLIP2Q9UDT6 1046 aa17.56■□□□□ 0.4
GINS3-203ENST00000426538 MTMR7Q9Y216 660 aa17.56■□□□□ 0.4
GINS3-203ENST00000426538 SOCS7O14512 581 aa17.55■□□□□ 0.4
GINS3-203ENST00000426538 MCM4P33991 863 aa17.55■□□□□ 0.4
GINS3-203ENST00000426538 GNAQP50148 359 aa17.55■□□□□ 0.4
GINS3-203ENST00000426538 TMEM179Q6ZVK1 233 aa17.55■□□□□ 0.4
GINS3-203ENST00000426538 CDC37L1Q7L3B6 337 aa17.55■□□□□ 0.4
GINS3-203ENST00000426538 CMTR1Q8N1G2 835 aaKnown RBP17.55■□□□□ 0.4
GINS3-203ENST00000426538 C8orf76Q96K31 380 aa17.55■□□□□ 0.4
GINS3-203ENST00000426538 KANSL2Q9H9L4 492 aa17.55■□□□□ 0.4
GINS3-203ENST00000426538 STK36Q9NRP7 1315 aa17.55■□□□□ 0.4
GINS3-203ENST00000426538 SIPA1L1O43166 1804 aa17.55■□□□□ 0.4
GINS3-203ENST00000426538 FOSBP53539 338 aa17.55■□□□□ 0.4
GINS3-203ENST00000426538 ATP2B2Q01814 1243 aa17.55■□□□□ 0.4
GINS3-203ENST00000426538 APOBEC3FQ8IUX4 373 aaKnown RBP17.55■□□□□ 0.4
GINS3-203ENST00000426538 ALG1Q9BT22 464 aa17.55■□□□□ 0.4
GINS3-203ENST00000426538 RNF26Q9BY78 433 aaPredicted RBP17.55■□□□□ 0.4
GINS3-203ENST00000426538 DEFB129Q9H1M3 183 aa17.55■□□□□ 0.4
GINS3-203ENST00000426538 SCAF8Q9UPN6 1271 aaKnown RBP17.55■□□□□ 0.4
GINS3-203ENST00000426538 GDF11O95390 407 aa17.54■□□□□ 0.4
GINS3-203ENST00000426538 DEXIO95424 95 aa17.54■□□□□ 0.4
GINS3-203ENST00000426538 TRIM29Q14134 588 aa17.54■□□□□ 0.4
GINS3-203ENST00000426538 ANGEL2Q5VTE6 544 aaKnown RBP17.54■□□□□ 0.4
GINS3-203ENST00000426538 TMTC3Q6ZXV5 915 aa17.54■□□□□ 0.4
GINS3-203ENST00000426538 MIGA2Q7L4E1 593 aa17.54■□□□□ 0.4
GINS3-203ENST00000426538 NBPF11Q86T75 865 aa17.54■□□□□ 0.4
GINS3-203ENST00000426538 TRPM4Q8TD43 1214 aa17.54■□□□□ 0.4
GINS3-203ENST00000426538 ADARB2Q9NS39 739 aaKnown RBP17.54■□□□□ 0.4
GINS3-203ENST00000426538 DDX11L8A8MPP1 907 aa17.53■□□□□ 0.4
GINS3-203ENST00000426538 PLEKHA8P1O95397 391 aa17.53■□□□□ 0.4
GINS3-203ENST00000426538 GRM4Q14833 912 aa17.53■□□□□ 0.4
GINS3-203ENST00000426538 FOXD4L6Q3SYB3 417 aaPredicted RBP17.53■□□□□ 0.4
GINS3-203ENST00000426538 MCTP1Q6DN14 999 aa17.53■□□□□ 0.4
GINS3-203ENST00000426538 FOXD4L3Q6VB84 417 aaPredicted RBP17.53■□□□□ 0.4
GINS3-203ENST00000426538 FERMT3Q86UX7 667 aa17.53■□□□□ 0.4
GINS3-203ENST00000426538 RGS22Q8NE09 1264 aa17.53■□□□□ 0.4
GINS3-203ENST00000426538 ZSCAN16Q9H4T2 348 aaPredicted RBP17.53■□□□□ 0.4
GINS3-203ENST00000426538 ASTN2O75129 1339 aaPredicted RBP17.53■□□□□ 0.4
GINS3-203ENST00000426538 PARP1P09874 1014 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms