RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 ANKRD13CQ8N6S4 541 aa20.96■□□□□ 0.95
SLC6A1-202ENST00000425938 SLC44A5Q8NCS7 719 aa20.96■□□□□ 0.95
SLC6A1-202ENST00000425938 DYNLL2Q96FJ2 89 aa20.96■□□□□ 0.95
SLC6A1-202ENST00000425938 TMEM106CQ9BVX2 250 aa20.96■□□□□ 0.95
SLC6A1-202ENST00000425938 DOCK3Q8IZD9 2030 aa20.95■□□□□ 0.94
SLC6A1-202ENST00000425938 RBBP6Q7Z6E9 1792 aaKnown RBP20.95■□□□□ 0.94
SLC6A1-202ENST00000425938 CYP2D7A0A087X1C5 515 aa20.95■□□□□ 0.94
SLC6A1-202ENST00000425938 SEPT2Q15019 361 aa20.95■□□□□ 0.94
SLC6A1-202ENST00000425938 ZYXQ15942 572 aaKnown RBP20.95■□□□□ 0.94
SLC6A1-202ENST00000425938 FAM110CQ1W6H9 321 aa20.95■□□□□ 0.94
SLC6A1-202ENST00000425938 CTR9Q6PD62 1173 aa20.95■□□□□ 0.94
SLC6A1-202ENST00000425938 TMEM179Q6ZVK1 233 aa20.95■□□□□ 0.94
SLC6A1-202ENST00000425938 EVI5LQ96CN4 794 aa20.95■□□□□ 0.94
SLC6A1-202ENST00000425938 EMILIN3Q9NT22 766 aa20.95■□□□□ 0.94
SLC6A1-202ENST00000425938 GSG1L2A8MUP6 293 aa20.94■□□□□ 0.94
SLC6A1-202ENST00000425938 M0R2C6 588 aa20.94■□□□□ 0.94
SLC6A1-202ENST00000425938 IGHDP01880 384 aa20.94■□□□□ 0.94
SLC6A1-202ENST00000425938 APPP05067 770 aa20.94■□□□□ 0.94
SLC6A1-202ENST00000425938 CDK8P49336 464 aa20.94■□□□□ 0.94
SLC6A1-202ENST00000425938 C16orf86Q6ZW13 317 aa20.94■□□□□ 0.94
SLC6A1-202ENST00000425938 C12orf42Q96LP6 360 aa20.94■□□□□ 0.94
SLC6A1-202ENST00000425938 CCDC17Q96LX7 622 aa20.94■□□□□ 0.94
SLC6A1-202ENST00000425938 KIAA1683Q9H0B3 1180 aa20.94■□□□□ 0.94
SLC6A1-202ENST00000425938 MYPNQ86TC9 1320 aa20.94■□□□□ 0.94
SLC6A1-202ENST00000425938 PDE4DIPQ5VU43 2346 aa20.93■□□□□ 0.94
SLC6A1-202ENST00000425938 GUCY1A2P33402 732 aa20.93■□□□□ 0.94
SLC6A1-202ENST00000425938 TDO2P48775 406 aa20.93■□□□□ 0.94
SLC6A1-202ENST00000425938 SBK1Q52WX2 424 aa20.93■□□□□ 0.94
SLC6A1-202ENST00000425938 CHD1LQ86WJ1 897 aa20.93■□□□□ 0.94
SLC6A1-202ENST00000425938 RAET1EQ8TD07 263 aa20.93■□□□□ 0.94
SLC6A1-202ENST00000425938 ACER1Q8TDN7 264 aa20.93■□□□□ 0.94
SLC6A1-202ENST00000425938 SH3TC2Q8TF17 1288 aa20.93■□□□□ 0.94
SLC6A1-202ENST00000425938 NACAP1Q9BZK3 213 aa20.93■□□□□ 0.94
SLC6A1-202ENST00000425938 TNPO2O14787 897 aaKnown RBP20.92■□□□□ 0.94
SLC6A1-202ENST00000425938 AKR1B1P15121 316 aa20.92■□□□□ 0.94
SLC6A1-202ENST00000425938 NUCB1Q02818 461 aa20.92■□□□□ 0.94
SLC6A1-202ENST00000425938 ZMYM1Q5SVZ6 1142 aa20.92■□□□□ 0.94
SLC6A1-202ENST00000425938 GTF3C2Q8WUA4 911 aaPredicted RBP20.92■□□□□ 0.94
SLC6A1-202ENST00000425938 MINDY4BA8MYZ0 360 aa20.91■□□□□ 0.94
SLC6A1-202ENST00000425938 PATL2C9JE40 543 aaKnown RBP20.91■□□□□ 0.94
SLC6A1-202ENST00000425938 HERVK_113P62684 666 aa20.91■□□□□ 0.94
SLC6A1-202ENST00000425938 SEC62Q99442 399 aaKnown RBP20.91■□□□□ 0.94
SLC6A1-202ENST00000425938 P2RX7Q99572 595 aaKnown RBP20.91■□□□□ 0.94
SLC6A1-202ENST00000425938 ARHGEF10LQ9HCE6 1279 aa20.91■□□□□ 0.94
SLC6A1-202ENST00000425938 BRCA2P51587 3418 aa20.91■□□□□ 0.94
SLC6A1-202ENST00000425938 USP17L15C9J2P7 530 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 USP17L13C9JLJ4 530 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 USP17L11C9JVI0 530 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 USP17L18D6R9N7 530 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 USP17L22D6RA61 530 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 USP17L17D6RBQ6 530 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 USP17L19D6RCP7 530 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 USP17L20D6RJB6 530 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 SMIM22K7EJ46 135 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 EN2P19622 333 aaPredicted RBP20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 GRK4P32298 578 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 IRX6P78412 446 aaPredicted RBP20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 PRKCZQ05513 592 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 USP17L24Q0WX57 530 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 COA7Q96BR5 231 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 SH2D4AQ9H788 454 aa20.9■□□□□ 0.94
SLC6A1-202ENST00000425938 TRIM6-TRIM34B2RNG4 842 aa20.89■□□□□ 0.93
SLC6A1-202ENST00000425938 VCAM1P19320 739 aa20.89■□□□□ 0.93
SLC6A1-202ENST00000425938 ICA1Q05084 483 aa20.89■□□□□ 0.93
SLC6A1-202ENST00000425938 TICAM2Q86XR7 235 aa20.89■□□□□ 0.93
SLC6A1-202ENST00000425938 IFNL3Q8IZI9 196 aa20.89■□□□□ 0.93
SLC6A1-202ENST00000425938 MKNK2Q9HBH9 465 aa20.89■□□□□ 0.93
SLC6A1-202ENST00000425938 ZNF287Q9HBT7 754 aa20.89■□□□□ 0.93
SLC6A1-202ENST00000425938 EPB41L4AQ9HCS5 686 aaPredicted RBP20.89■□□□□ 0.93
SLC6A1-202ENST00000425938 MORF4L1Q9UBU8 362 aa20.89■□□□□ 0.93
SLC6A1-202ENST00000425938 ROBO3Q96MS0 1386 aa20.88■□□□□ 0.93
SLC6A1-202ENST00000425938 MYCP01106 439 aaPredicted RBP20.88■□□□□ 0.93
SLC6A1-202ENST00000425938 GPRC5AQ8NFJ5 357 aa20.88■□□□□ 0.93
SLC6A1-202ENST00000425938 NAPBQ9H115 298 aa20.88■□□□□ 0.93
SLC6A1-202ENST00000425938 MKI67P46013 3256 aaKnown RBP20.87■□□□□ 0.93
SLC6A1-202ENST00000425938 A0A1W2PRG0 241 aa20.87■□□□□ 0.93
SLC6A1-202ENST00000425938 CATSPERGQ6ZRH7 1159 aa20.87■□□□□ 0.93
SLC6A1-202ENST00000425938 PLEKHM2Q8IWE5 1019 aa20.87■□□□□ 0.93
SLC6A1-202ENST00000425938 STK11IPQ8N1F8 1099 aa20.87■□□□□ 0.93
SLC6A1-202ENST00000425938 SLAIN1Q8ND83 568 aa20.87■□□□□ 0.93
SLC6A1-202ENST00000425938 RPAP3Q9H6T3 665 aaPredicted RBP20.87■□□□□ 0.93
SLC6A1-202ENST00000425938 KANSL2Q9H9L4 492 aa20.87■□□□□ 0.93
SLC6A1-202ENST00000425938 GABRQQ9UN88 632 aa20.87■□□□□ 0.93
SLC6A1-202ENST00000425938 SLC3A2P08195 630 aaKnown RBP20.86■□□□□ 0.93
SLC6A1-202ENST00000425938 FLT3LGP49771 235 aa20.86■□□□□ 0.93
SLC6A1-202ENST00000425938 PRPF38BQ5VTL8 546 aaKnown RBP20.86■□□□□ 0.93
SLC6A1-202ENST00000425938 CCAR1Q8IX12 1150 aaKnown RBP20.86■□□□□ 0.93
SLC6A1-202ENST00000425938 LPAR1Q92633 364 aa20.86■□□□□ 0.93
SLC6A1-202ENST00000425938 RILPL2Q969X0 211 aa20.86■□□□□ 0.93
SLC6A1-202ENST00000425938 PAGR1Q9BTK6 254 aa20.86■□□□□ 0.93
SLC6A1-202ENST00000425938 OSBPL3Q9H4L5 887 aa20.86■□□□□ 0.93
SLC6A1-202ENST00000425938 HELLSQ9NRZ9 838 aa20.86■□□□□ 0.93
SLC6A1-202ENST00000425938 UBXN2AP68543 259 aa20.85■□□□□ 0.93
SLC6A1-202ENST00000425938 ATP2B2Q01814 1243 aa20.85■□□□□ 0.93
SLC6A1-202ENST00000425938 IRF5Q13568 498 aa20.85■□□□□ 0.93
SLC6A1-202ENST00000425938 CCDC129Q6ZRS4 1044 aa20.85■□□□□ 0.93
SLC6A1-202ENST00000425938 CLEC10AQ8IUN9 316 aa20.85■□□□□ 0.93
SLC6A1-202ENST00000425938 TXNRD2Q9NNW7 524 aa20.85■□□□□ 0.93
SLC6A1-202ENST00000425938 RBPJLQ9UBG7 517 aa20.85■□□□□ 0.93
SLC6A1-202ENST00000425938 BIN2Q9UBW5 565 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms