RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 CFHP08603 1231 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 HSPD1P10809 573 aaKnown RBP8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 GNAT2P19087 354 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 USP5P45974 858 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 PICALMQ13492 652 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CST9Q5W186 159 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 BLOC1S3Q6QNY0 202 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 IFNL3Q8IZI9 196 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CDCA5Q96FF9 252 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 ESYT1Q9BSJ8 1104 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 SLC4A4Q9Y6R1 1079 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 SSC5DA1L4H1 1573 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CDK5RAP2Q96SN8 1893 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CCDC171Q6TFL3 1326 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 RAD50Q92878 1312 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 AK9Q5TCS8 1911 aa8.46□□□□□ -1.06
CHCHD3P1-201ENST00000425516 SMIM22K7EJ46 135 aa8.45□□□□□ -1.06
CHCHD3P1-201ENST00000425516 TLL1O43897 1013 aa8.45□□□□□ -1.06
CHCHD3P1-201ENST00000425516 FGAP02671 866 aa8.45□□□□□ -1.06
CHCHD3P1-201ENST00000425516 SLURP2P0DP57 97 aa8.45□□□□□ -1.06
CHCHD3P1-201ENST00000425516 MAP2K5Q13163 448 aa8.45□□□□□ -1.06
CHCHD3P1-201ENST00000425516 SBK1Q52WX2 424 aa8.45□□□□□ -1.06
CHCHD3P1-201ENST00000425516 C12orf60Q5U649 245 aa8.45□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CTR9Q6PD62 1173 aa8.45□□□□□ -1.06
CHCHD3P1-201ENST00000425516 RUFY2Q8WXA3 655 aa8.45□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CCDC102AQ96A19 550 aa8.45□□□□□ -1.06
CHCHD3P1-201ENST00000425516 DSCC1Q9BVC3 393 aa8.45□□□□□ -1.06
CHCHD3P1-201ENST00000425516 DHX36Q9H2U1 1008 aaKnown RBP8.45□□□□□ -1.06
CHCHD3P1-201ENST00000425516 PALD1Q9ULE6 856 aa8.45□□□□□ -1.06
CHCHD3P1-201ENST00000425516 DDX60LQ5H9U9 1706 aaKnown RBP8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CYP2D7A0A087X1C5 515 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 USP17L12C9JPN9 530 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 USP17L21D6R901 530 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 USP2O75604 605 aaPredicted RBP8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CYP2D6P10635 497 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 PLCD1P51178 756 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 MFAP1P55081 439 aaKnown RBP8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 PTH1RQ03431 593 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 GABPAQ06546 454 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 MAP3K11Q16584 847 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 SUPT20HL1Q3ZLR7 823 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 FOXP4Q8IVH2 680 aaPredicted RBP8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 MAP4K1Q92918 833 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 LSG1Q9H089 658 aaKnown RBP8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 EHD4Q9H223 541 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 DNAJC18Q9H819 358 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 MCM9Q9NXL9 1143 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 PI4KBQ9UBF8 816 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 SAP30BPQ9UHR5 308 aaKnown RBP8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 ZNF112Q9UJU3 913 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 ZMYM6O95789 1325 aa8.44□□□□□ -1.06
CHCHD3P1-201ENST00000425516 SIPA1L1O43166 1804 aa8.43□□□□□ -1.06
CHCHD3P1-201ENST00000425516 PHF20L1A8MW92 1017 aa8.43□□□□□ -1.06
CHCHD3P1-201ENST00000425516 IRF6O14896 467 aa8.43□□□□□ -1.06
CHCHD3P1-201ENST00000425516 LDLRAD1Q5T700 205 aa8.43□□□□□ -1.06
CHCHD3P1-201ENST00000425516 TATDN1Q6P1N9 297 aa8.43□□□□□ -1.06
CHCHD3P1-201ENST00000425516 TTC6Q86TZ1 520 aa8.43□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CSRNP1Q96S65 589 aa8.43□□□□□ -1.06
CHCHD3P1-201ENST00000425516 IL21Q9HBE4 155 aa8.43□□□□□ -1.06
CHCHD3P1-201ENST00000425516 ANAPC4Q9UJX5 808 aa8.43□□□□□ -1.06
CHCHD3P1-201ENST00000425516 FZD1Q9UP38 647 aa8.43□□□□□ -1.06
CHCHD3P1-201ENST00000425516 TACC3Q9Y6A5 838 aa8.43□□□□□ -1.06
CHCHD3P1-201ENST00000425516 DDX11L8A8MPP1 907 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CELF2O95319 508 aaKnown RBP8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 APPP05067 770 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 POLR3DP05423 398 aaPredicted RBP8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 FGRP09769 529 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 TDO2P48775 406 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 FKBP1BP68106 108 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 RRP1BQ14684 758 aaKnown RBP8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 PUS10Q3MIT2 529 aaKnown RBP8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 C8orf34Q49A92 452 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 MOB2Q70IA6 237 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 MIGA2Q7L4E1 593 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 ZSCAN29Q8IWY8 852 aaPredicted RBP8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 KLRG1Q96E93 195 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 HOOK2Q96ED9 719 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 NACAP1Q9BZK3 213 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 NAPBQ9H115 298 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 GBA2Q9HCG7 927 aaPredicted RBP8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 ARPP21Q9UBL0 812 aaPredicted RBP8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 HERC5Q9UII4 1024 aaKnown RBP8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 ROBO3Q96MS0 1386 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 MYH1P12882 1939 aa8.42□□□□□ -1.06
CHCHD3P1-201ENST00000425516 BAZ2AQ9UIF9 1905 aaKnown RBP8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 NAV1Q8NEY1 1877 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 UNCXA6NJT0 531 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 TMEM88BA6NKF7 163 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 FAM196BA6NMK8 535 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 HLA-DOAP06340 250 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 SHMT1P34896 483 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 NF2P35240 595 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 C1QTNF8P60827 252 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 JAG1P78504 1218 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 NECTIN1Q15223 517 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 SLC4A8Q2Y0W8 1093 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 DCAF15Q66K64 600 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CASC1Q6TDU7 716 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 C16orf86Q6ZW13 317 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms