RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 DOCK1Q14185 1865 aa14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 MPHOSPH10O00566 681 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 SOX1O00570 391 aaPredicted RBP14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 DYNLL1P63167 89 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 POLA2Q14181 598 aa14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 COG2Q14746 738 aa14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 TATDN1Q6P1N9 297 aa14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 TMEM57Q8N5G2 664 aa14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 MAGEB6Q8N7X4 407 aa14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 MIGA1Q8NAN2 632 aa14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 LPAR1Q92633 364 aa14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 DDRGK1Q96HY6 314 aa14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 CRNKL1Q9BZJ0 848 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 CCDC8Q9H0W5 538 aaPredicted RBP14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 PORCNQ9H237 461 aa14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 DDX20Q9UHI6 824 aaKnown RBP14.89□□□□□ -0.03
HLA-DQB3-203ENST00000425319 MS4A1P11836 297 aa14.88□□□□□ -0.03
HLA-DQB3-203ENST00000425319 CCND3P30281 292 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB3-203ENST00000425319 ITPRIPQ8IWB1 547 aa14.88□□□□□ -0.03
HLA-DQB3-203ENST00000425319 USP6NLQ92738 828 aa14.88□□□□□ -0.03
HLA-DQB3-203ENST00000425319 SH2D4AQ9H788 454 aa14.88□□□□□ -0.03
HLA-DQB3-203ENST00000425319 NOP58Q9Y2X3 529 aaKnown RBP14.88□□□□□ -0.03
HLA-DQB3-203ENST00000425319 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.88□□□□□ -0.03
HLA-DQB3-203ENST00000425319 MGAMO43451 1857 aa14.87□□□□□ -0.03
HLA-DQB3-203ENST00000425319 MAGEB6P1A0A0J9YX57 407 aa14.87□□□□□ -0.03
HLA-DQB3-203ENST00000425319 KBTBD13C9JR72 458 aa14.87□□□□□ -0.03
HLA-DQB3-203ENST00000425319 COL6A1P12109 1028 aa14.87□□□□□ -0.03
HLA-DQB3-203ENST00000425319 MDM2Q00987 491 aaPredicted RBP14.87□□□□□ -0.03
HLA-DQB3-203ENST00000425319 CCL14Q16627 93 aa14.87□□□□□ -0.03
HLA-DQB3-203ENST00000425319 LHX8Q68G74 356 aa14.87□□□□□ -0.03
HLA-DQB3-203ENST00000425319 PIH1D3Q9NQM4 214 aaKnown RBP14.87□□□□□ -0.03
HLA-DQB3-203ENST00000425319 LBX2Q6XYB7 198 aa14.86□□□□□ -0.03
HLA-DQB3-203ENST00000425319 ADGRA1Q86SQ6 560 aa14.86□□□□□ -0.03
HLA-DQB3-203ENST00000425319 MB21D1Q8N884 522 aa14.86□□□□□ -0.03
HLA-DQB3-203ENST00000425319 CHMP4BQ9H444 224 aaKnown RBP14.86□□□□□ -0.03
HLA-DQB3-203ENST00000425319 RPAP3Q9H6T3 665 aaPredicted RBP14.86□□□□□ -0.03
HLA-DQB3-203ENST00000425319 DNAJC18Q9H819 358 aa14.86□□□□□ -0.03
HLA-DQB3-203ENST00000425319 ARHGEF10LQ9HCE6 1279 aa14.86□□□□□ -0.03
HLA-DQB3-203ENST00000425319 NDUFB9Q9Y6M9 179 aa14.86□□□□□ -0.03
HLA-DQB3-203ENST00000425319 DNM1LO00429 736 aa14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 HOXC6P09630 235 aa14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 VCAM1P19320 739 aa14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 JAG1P78504 1218 aa14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 LRRC26Q2I0M4 334 aa14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 FAM109BQ6ICB4 259 aaPredicted RBP14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 AACSQ86V21 672 aa14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 CLASRPQ8N2M8 674 aaKnown RBP14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 TANGO6Q9C0B7 1094 aa14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 MROH8Q9H579 483 aa14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 MTMR10Q9NXD2 777 aa14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 MCM9Q9NXL9 1143 aa14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 SWAP70Q9UH65 585 aa14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 DBNLQ9UJU6 430 aaKnown RBP14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 PFASO15067 1338 aa14.85□□□□□ -0.03
HLA-DQB3-203ENST00000425319 HMMRO75330 724 aa14.84□□□□□ -0.03
HLA-DQB3-203ENST00000425319 ATN1P54259 1190 aaPredicted RBP14.84□□□□□ -0.03
HLA-DQB3-203ENST00000425319 PLS1Q14651 629 aa14.84□□□□□ -0.03
HLA-DQB3-203ENST00000425319 SLC9C2Q5TAH2 1124 aa14.84□□□□□ -0.03
HLA-DQB3-203ENST00000425319 ZNF697Q5TEC3 545 aa14.84□□□□□ -0.03
HLA-DQB3-203ENST00000425319 SHCBP1Q8NEM2 672 aa14.84□□□□□ -0.03
HLA-DQB3-203ENST00000425319 EAF2Q96CJ1 260 aaPredicted RBP14.84□□□□□ -0.03
HLA-DQB3-203ENST00000425319 TRIOBPQ9H2D6 2365 aa14.84□□□□□ -0.03
HLA-DQB3-203ENST00000425319 PEX10O60683 326 aa14.83□□□□□ -0.04
HLA-DQB3-203ENST00000425319 IFIT2P09913 472 aaKnown RBP14.83□□□□□ -0.04
HLA-DQB3-203ENST00000425319 GRB14Q14449 540 aa14.83□□□□□ -0.04
HLA-DQB3-203ENST00000425319 OLFML2BQ68BL8 750 aa14.83□□□□□ -0.04
HLA-DQB3-203ENST00000425319 TMEM179Q6ZVK1 233 aa14.83□□□□□ -0.04
HLA-DQB3-203ENST00000425319 NCAPG2Q86XI2 1143 aa14.83□□□□□ -0.04
HLA-DQB3-203ENST00000425319 CCDC17Q96LX7 622 aa14.83□□□□□ -0.04
HLA-DQB3-203ENST00000425319 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.83□□□□□ -0.04
HLA-DQB3-203ENST00000425319 ATP11BQ9Y2G3 1177 aa14.83□□□□□ -0.04
HLA-DQB3-203ENST00000425319 MKI67P46013 3256 aaKnown RBP14.83□□□□□ -0.04
HLA-DQB3-203ENST00000425319 SLC25A27O95847 323 aa14.82□□□□□ -0.04
HLA-DQB3-203ENST00000425319 FCER1AP12319 257 aa14.82□□□□□ -0.04
HLA-DQB3-203ENST00000425319 CYP2C19P33261 490 aa14.82□□□□□ -0.04
HLA-DQB3-203ENST00000425319 SEPT2Q15019 361 aa14.82□□□□□ -0.04
HLA-DQB3-203ENST00000425319 Q7L0L9 218 aa14.82□□□□□ -0.04
HLA-DQB3-203ENST00000425319 ACER1Q8TDN7 264 aa14.82□□□□□ -0.04
HLA-DQB3-203ENST00000425319 CENPFP49454 3210 aa14.82□□□□□ -0.04
HLA-DQB3-203ENST00000425319 SPDYE16A6NNV3 312 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 SEPT4O43236 478 aa14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 ADORA2AP29274 412 aa14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 PLCD1P51178 756 aa14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 RTP1P59025 263 aa14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 SLC39A5Q6ZMH5 540 aa14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 ABRAQ8N0Z2 381 aa14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 NPLOC4Q8TAT6 608 aa14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 MOV10L1Q9BXT6 1211 aaKnown RBP14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 SPATC1LQ9H0A9 340 aa14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 C1orf115Q9H7X2 142 aa14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 PRDM5Q9NQX1 630 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 BTBD7Q9P203 1132 aa14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 CTDP1Q9Y5B0 961 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQB3-203ENST00000425319 CNMDO75829 334 aa14.8□□□□□ -0.04
HLA-DQB3-203ENST00000425319 FLOT1O75955 427 aa14.8□□□□□ -0.04
HLA-DQB3-203ENST00000425319 ERCC3P19447 782 aa14.8□□□□□ -0.04
HLA-DQB3-203ENST00000425319 COPB2P35606 906 aa14.8□□□□□ -0.04
HLA-DQB3-203ENST00000425319 SHROOM1Q2M3G4 852 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQB3-203ENST00000425319 GJC2Q5T442 439 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms