RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 RALGPS1Q5JS13 557 aa9.13□□□□□ -0.95
LINC01040-201ENST00000425048 C1QL4Q86Z23 238 aa9.13□□□□□ -0.95
LINC01040-201ENST00000425048 CREG2Q8IUH2 290 aa9.13□□□□□ -0.95
LINC01040-201ENST00000425048 TRIT1Q9H3H1 467 aaKnown RBP9.13□□□□□ -0.95
LINC01040-201ENST00000425048 DCP1AQ9NPI6 582 aaPredicted RBP9.13□□□□□ -0.95
LINC01040-201ENST00000425048 KRT1P04264 644 aa9.12□□□□□ -0.95
LINC01040-201ENST00000425048 DIEXFQ68CQ4 756 aaKnown RBP9.12□□□□□ -0.95
LINC01040-201ENST00000425048 DUSP9Q99956 384 aaKnown RBP9.12□□□□□ -0.95
LINC01040-201ENST00000425048 DUSP15Q9H1R2 295 aaPredicted RBP9.12□□□□□ -0.95
LINC01040-201ENST00000425048 ADAM30Q9UKF2 790 aa9.12□□□□□ -0.95
LINC01040-201ENST00000425048 RBAK-RBAKDNI3L0D1 243 aa9.11□□□□□ -0.95
LINC01040-201ENST00000425048 TPP2P29144 1249 aaPredicted RBP9.11□□□□□ -0.95
LINC01040-201ENST00000425048 HK2P52789 917 aa9.11□□□□□ -0.95
LINC01040-201ENST00000425048 RPL6Q02878 288 aaKnown RBP9.11□□□□□ -0.95
LINC01040-201ENST00000425048 JARID2Q92833 1246 aaPredicted RBP9.11□□□□□ -0.95
LINC01040-201ENST00000425048 Q96M66 194 aa9.11□□□□□ -0.95
LINC01040-201ENST00000425048 ADAMTS10Q9H324 1103 aa9.11□□□□□ -0.95
LINC01040-201ENST00000425048 EPB41L4BQ9H329 900 aa9.11□□□□□ -0.95
LINC01040-201ENST00000425048 WASH4PA8MWX3 477 aa9.1□□□□□ -0.95
LINC01040-201ENST00000425048 HPXP02790 462 aa9.1□□□□□ -0.95
LINC01040-201ENST00000425048 ZSCAN22P10073 491 aaPredicted RBP9.1□□□□□ -0.95
LINC01040-201ENST00000425048 TFE3P19532 575 aaPredicted RBP9.1□□□□□ -0.95
LINC01040-201ENST00000425048 ERVFC1P60507 584 aa9.1□□□□□ -0.95
LINC01040-201ENST00000425048 LCNL1Q6ZST4 164 aa9.1□□□□□ -0.95
LINC01040-201ENST00000425048 DNAJB8Q8NHS0 232 aa9.1□□□□□ -0.95
LINC01040-201ENST00000425048 ACSF2Q96CM8 615 aaPredicted RBP9.1□□□□□ -0.95
LINC01040-201ENST00000425048 GPATCH2Q9NW75 528 aa9.1□□□□□ -0.95
LINC01040-201ENST00000425048 PATL2C9JE40 543 aaKnown RBP9.09□□□□□ -0.95
LINC01040-201ENST00000425048 EAPPQ56P03 285 aaPredicted RBP9.09□□□□□ -0.95
LINC01040-201ENST00000425048 KCNH3Q9ULD8 1083 aa9.09□□□□□ -0.95
LINC01040-201ENST00000425048 GAB4Q2WGN9 574 aa9.08□□□□□ -0.96
LINC01040-201ENST00000425048 KCNN1Q92952 543 aa9.08□□□□□ -0.96
LINC01040-201ENST00000425048 NOC4LQ9BVI4 516 aaKnown RBP9.08□□□□□ -0.96
LINC01040-201ENST00000425048 KCNK12Q9HB15 430 aa9.08□□□□□ -0.96
LINC01040-201ENST00000425048 RNF19AQ9NV58 838 aa9.08□□□□□ -0.96
LINC01040-201ENST00000425048 NPIPB6E9PJ23 425 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 SRFP11831 508 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 TAF1CQ15572 869 aaPredicted RBP9.07□□□□□ -0.96
LINC01040-201ENST00000425048 MEI1Q5TIA1 1274 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 ATG14Q6ZNE5 492 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 GPR62Q9BZJ7 368 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 DUSP13Q9UII6 198 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 TLR6Q9Y2C9 796 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 PLCG1P19174 1290 aa9.06□□□□□ -0.96
LINC01040-201ENST00000425048 CCDC84Q86UT8 332 aaPredicted RBP9.06□□□□□ -0.96
LINC01040-201ENST00000425048 AMIGO3Q86WK7 504 aa9.06□□□□□ -0.96
LINC01040-201ENST00000425048 PPP1R13LQ8WUF5 828 aa9.06□□□□□ -0.96
LINC01040-201ENST00000425048 CYB5D2Q8WUJ1 264 aa9.06□□□□□ -0.96
LINC01040-201ENST00000425048 SLC26A8Q96RN1 970 aa9.06□□□□□ -0.96
LINC01040-201ENST00000425048 TCAF2A6NFQ2 919 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 UPK3BL1B0FP48 263 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 UPK3BL2E5RIL1 263 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 MED14OSP0DP75 135 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 YARSP54577 528 aaKnown RBP9.05□□□□□ -0.96
LINC01040-201ENST00000425048 EGR3Q06889 387 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 KCNA10Q16322 511 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 TSPYL5Q86VY4 417 aaPredicted RBP9.05□□□□□ -0.96
LINC01040-201ENST00000425048 OXR1Q8N573 874 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 PDZD8Q8NEN9 1154 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 SYTL4Q96C24 671 aaPredicted RBP9.05□□□□□ -0.96
LINC01040-201ENST00000425048 CORINQ9Y5Q5 1042 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 ANKRD33BA6NCL7 494 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 ETV2O00321 342 aaPredicted RBP9.04□□□□□ -0.96
LINC01040-201ENST00000425048 GLDCP23378 1020 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 ST13P50502 369 aaKnown RBP9.04□□□□□ -0.96
LINC01040-201ENST00000425048 LILRA2Q8N149 483 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 DTWD2Q8NBA8 298 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 PHC3Q8NDX5 983 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 FAM13CQ8NE31 585 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 DHX38Q92620 1227 aaKnown RBP9.04□□□□□ -0.96
LINC01040-201ENST00000425048 CD320Q9NPF0 282 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 PARP2Q9UGN5 583 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 TRHRP34981 398 aaPredicted RBP9.03□□□□□ -0.96
LINC01040-201ENST00000425048 TMEM201Q5SNT2 666 aa9.03□□□□□ -0.96
LINC01040-201ENST00000425048 CIAPIN1Q6FI81 312 aa9.03□□□□□ -0.96
LINC01040-201ENST00000425048 TRAIPQ9BWF2 469 aa9.03□□□□□ -0.96
LINC01040-201ENST00000425048 SMG5Q9UPR3 1016 aaKnown RBP9.03□□□□□ -0.96
LINC01040-201ENST00000425048 BPNT1O95861 308 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 ZGLP1P0C6A0 271 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 DAB2P98082 770 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 PSMD2Q13200 908 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 RNF141Q8WVD5 230 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 RNF32Q9H0A6 362 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 C19orf44Q9H6X5 657 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 SP110Q9HB58 689 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 USP31Q70CQ4 1352 aa9.01□□□□□ -0.97
LINC01040-201ENST00000425048 CILPO75339 1184 aa9.01□□□□□ -0.97
LINC01040-201ENST00000425048 LTKP29376 864 aa9.01□□□□□ -0.97
LINC01040-201ENST00000425048 LILRA6Q6PI73 481 aa9.01□□□□□ -0.97
LINC01040-201ENST00000425048 SPPL2CQ8IUH8 684 aa9.01□□□□□ -0.97
LINC01040-201ENST00000425048 FITM1A5D6W6 292 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 KRTAP9-7A8MTY7 169 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 LRRN2O75325 713 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 TNNI2P48788 182 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 LMNB2Q03252 620 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 CAMK2GQ13555 558 aaPredicted RBP9□□□□□ -0.97
LINC01040-201ENST00000425048 BNC2Q6ZN30 1099 aaPredicted RBP9□□□□□ -0.97
LINC01040-201ENST00000425048 SLFN12Q8IYM2 578 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 SLC6A17Q9H1V8 727 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 PCDHA11Q9Y5I1 949 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms