RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 RALGPS1Q5JS13 557 aa9.13□□□□□ -0.95
LINC01040-201ENST00000425048 C1QL4Q86Z23 238 aa9.13□□□□□ -0.95
LINC01040-201ENST00000425048 CREG2Q8IUH2 290 aa9.13□□□□□ -0.95
LINC01040-201ENST00000425048 TRIT1Q9H3H1 467 aaKnown RBP9.13□□□□□ -0.95
LINC01040-201ENST00000425048 DCP1AQ9NPI6 582 aaPredicted RBP9.13□□□□□ -0.95
LINC01040-201ENST00000425048 KRT1P04264 644 aa9.12□□□□□ -0.95
LINC01040-201ENST00000425048 DIEXFQ68CQ4 756 aaKnown RBP9.12□□□□□ -0.95
LINC01040-201ENST00000425048 DUSP9Q99956 384 aaKnown RBP9.12□□□□□ -0.95
LINC01040-201ENST00000425048 DUSP15Q9H1R2 295 aaPredicted RBP9.12□□□□□ -0.95
LINC01040-201ENST00000425048 ADAM30Q9UKF2 790 aa9.12□□□□□ -0.95
LINC01040-201ENST00000425048 RBAK-RBAKDNI3L0D1 243 aa9.11□□□□□ -0.95
LINC01040-201ENST00000425048 TPP2P29144 1249 aaPredicted RBP9.11□□□□□ -0.95
LINC01040-201ENST00000425048 HK2P52789 917 aa9.11□□□□□ -0.95
LINC01040-201ENST00000425048 RPL6Q02878 288 aaKnown RBP9.11□□□□□ -0.95
LINC01040-201ENST00000425048 JARID2Q92833 1246 aaPredicted RBP9.11□□□□□ -0.95
LINC01040-201ENST00000425048 Q96M66 194 aa9.11□□□□□ -0.95
LINC01040-201ENST00000425048 ADAMTS10Q9H324 1103 aa9.11□□□□□ -0.95
LINC01040-201ENST00000425048 EPB41L4BQ9H329 900 aa9.11□□□□□ -0.95
LINC01040-201ENST00000425048 WASH4PA8MWX3 477 aa9.1□□□□□ -0.95
LINC01040-201ENST00000425048 HPXP02790 462 aa9.1□□□□□ -0.95
LINC01040-201ENST00000425048 ZSCAN22P10073 491 aaPredicted RBP9.1□□□□□ -0.95
LINC01040-201ENST00000425048 TFE3P19532 575 aaPredicted RBP9.1□□□□□ -0.95
LINC01040-201ENST00000425048 ERVFC1P60507 584 aa9.1□□□□□ -0.95
LINC01040-201ENST00000425048 LCNL1Q6ZST4 164 aa9.1□□□□□ -0.95
LINC01040-201ENST00000425048 DNAJB8Q8NHS0 232 aa9.1□□□□□ -0.95
LINC01040-201ENST00000425048 ACSF2Q96CM8 615 aaPredicted RBP9.1□□□□□ -0.95
LINC01040-201ENST00000425048 GPATCH2Q9NW75 528 aa9.1□□□□□ -0.95
LINC01040-201ENST00000425048 PATL2C9JE40 543 aaKnown RBP9.09□□□□□ -0.95
LINC01040-201ENST00000425048 EAPPQ56P03 285 aaPredicted RBP9.09□□□□□ -0.95
LINC01040-201ENST00000425048 KCNH3Q9ULD8 1083 aa9.09□□□□□ -0.95
LINC01040-201ENST00000425048 GAB4Q2WGN9 574 aa9.08□□□□□ -0.96
LINC01040-201ENST00000425048 KCNN1Q92952 543 aa9.08□□□□□ -0.96
LINC01040-201ENST00000425048 NOC4LQ9BVI4 516 aaKnown RBP9.08□□□□□ -0.96
LINC01040-201ENST00000425048 KCNK12Q9HB15 430 aa9.08□□□□□ -0.96
LINC01040-201ENST00000425048 RNF19AQ9NV58 838 aa9.08□□□□□ -0.96
LINC01040-201ENST00000425048 NPIPB6E9PJ23 425 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 SRFP11831 508 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 TAF1CQ15572 869 aaPredicted RBP9.07□□□□□ -0.96
LINC01040-201ENST00000425048 MEI1Q5TIA1 1274 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 ATG14Q6ZNE5 492 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 GPR62Q9BZJ7 368 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 DUSP13Q9UII6 198 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 TLR6Q9Y2C9 796 aa9.07□□□□□ -0.96
LINC01040-201ENST00000425048 PLCG1P19174 1290 aa9.06□□□□□ -0.96
LINC01040-201ENST00000425048 CCDC84Q86UT8 332 aaPredicted RBP9.06□□□□□ -0.96
LINC01040-201ENST00000425048 AMIGO3Q86WK7 504 aa9.06□□□□□ -0.96
LINC01040-201ENST00000425048 PPP1R13LQ8WUF5 828 aa9.06□□□□□ -0.96
LINC01040-201ENST00000425048 CYB5D2Q8WUJ1 264 aa9.06□□□□□ -0.96
LINC01040-201ENST00000425048 SLC26A8Q96RN1 970 aa9.06□□□□□ -0.96
LINC01040-201ENST00000425048 TCAF2A6NFQ2 919 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 UPK3BL1B0FP48 263 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 UPK3BL2E5RIL1 263 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 MED14OSP0DP75 135 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 YARSP54577 528 aaKnown RBP9.05□□□□□ -0.96
LINC01040-201ENST00000425048 EGR3Q06889 387 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 KCNA10Q16322 511 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 TSPYL5Q86VY4 417 aaPredicted RBP9.05□□□□□ -0.96
LINC01040-201ENST00000425048 OXR1Q8N573 874 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 PDZD8Q8NEN9 1154 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 SYTL4Q96C24 671 aaPredicted RBP9.05□□□□□ -0.96
LINC01040-201ENST00000425048 CORINQ9Y5Q5 1042 aa9.05□□□□□ -0.96
LINC01040-201ENST00000425048 ANKRD33BA6NCL7 494 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 ETV2O00321 342 aaPredicted RBP9.04□□□□□ -0.96
LINC01040-201ENST00000425048 GLDCP23378 1020 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 ST13P50502 369 aaKnown RBP9.04□□□□□ -0.96
LINC01040-201ENST00000425048 LILRA2Q8N149 483 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 DTWD2Q8NBA8 298 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 PHC3Q8NDX5 983 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 FAM13CQ8NE31 585 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 DHX38Q92620 1227 aaKnown RBP9.04□□□□□ -0.96
LINC01040-201ENST00000425048 CD320Q9NPF0 282 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 PARP2Q9UGN5 583 aa9.04□□□□□ -0.96
LINC01040-201ENST00000425048 TRHRP34981 398 aaPredicted RBP9.03□□□□□ -0.96
LINC01040-201ENST00000425048 TMEM201Q5SNT2 666 aa9.03□□□□□ -0.96
LINC01040-201ENST00000425048 CIAPIN1Q6FI81 312 aa9.03□□□□□ -0.96
LINC01040-201ENST00000425048 TRAIPQ9BWF2 469 aa9.03□□□□□ -0.96
LINC01040-201ENST00000425048 SMG5Q9UPR3 1016 aaKnown RBP9.03□□□□□ -0.96
LINC01040-201ENST00000425048 BPNT1O95861 308 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 ZGLP1P0C6A0 271 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 DAB2P98082 770 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 PSMD2Q13200 908 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 RNF141Q8WVD5 230 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 RNF32Q9H0A6 362 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 C19orf44Q9H6X5 657 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 SP110Q9HB58 689 aa9.02□□□□□ -0.97
LINC01040-201ENST00000425048 USP31Q70CQ4 1352 aa9.01□□□□□ -0.97
LINC01040-201ENST00000425048 CILPO75339 1184 aa9.01□□□□□ -0.97
LINC01040-201ENST00000425048 LTKP29376 864 aa9.01□□□□□ -0.97
LINC01040-201ENST00000425048 LILRA6Q6PI73 481 aa9.01□□□□□ -0.97
LINC01040-201ENST00000425048 SPPL2CQ8IUH8 684 aa9.01□□□□□ -0.97
LINC01040-201ENST00000425048 FITM1A5D6W6 292 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 KRTAP9-7A8MTY7 169 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 LRRN2O75325 713 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 TNNI2P48788 182 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 LMNB2Q03252 620 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 CAMK2GQ13555 558 aaPredicted RBP9□□□□□ -0.97
LINC01040-201ENST00000425048 BNC2Q6ZN30 1099 aaPredicted RBP9□□□□□ -0.97
LINC01040-201ENST00000425048 SLFN12Q8IYM2 578 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 SLC6A17Q9H1V8 727 aa9□□□□□ -0.97
LINC01040-201ENST00000425048 PCDHA11Q9Y5I1 949 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms