RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 TTC22Q5TAA0 569 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 DZIP1Q86YF9 867 aaKnown RBP8.48□□□□□ -1.05
EPHA4-206ENST00000424339 MEIOBQ8N635 442 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 KBTBD3Q8NAB2 608 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 OTUD7AQ8TE49 926 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-206ENST00000424339 SCARF2Q96GP6 870 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-206ENST00000424339 GMLQ99445 158 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 DNAJC2Q99543 621 aaKnown RBP8.48□□□□□ -1.05
EPHA4-206ENST00000424339 TSEN34Q9BSV6 310 aaKnown RBP8.48□□□□□ -1.05
EPHA4-206ENST00000424339 BCL11AQ9H165 835 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 IQSEC3Q9UPP2 1182 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-206ENST00000424339 COL1A1P02452 1464 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-206ENST00000424339 MYH7P12883 1935 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 AK9Q5TCS8 1911 aa8.48□□□□□ -1.05
EPHA4-206ENST00000424339 WDR90Q96KV7 1748 aa8.47□□□□□ -1.05
EPHA4-206ENST00000424339 H7C1D1 291 aa8.47□□□□□ -1.05
EPHA4-206ENST00000424339 GOLIM4O00461 696 aa8.47□□□□□ -1.05
EPHA4-206ENST00000424339 CYP2E1P05181 493 aaPredicted RBP8.47□□□□□ -1.05
EPHA4-206ENST00000424339 NDUFV2P19404 249 aa8.47□□□□□ -1.05
EPHA4-206ENST00000424339 MTMR2Q13614 643 aa8.47□□□□□ -1.05
EPHA4-206ENST00000424339 HHIPL2Q6UWX4 724 aa8.47□□□□□ -1.05
EPHA4-206ENST00000424339 WHAMMQ8TF30 809 aa8.47□□□□□ -1.05
EPHA4-206ENST00000424339 NANOS1Q8WY41 292 aaKnown RBP8.47□□□□□ -1.05
EPHA4-206ENST00000424339 TEKT1Q969V4 418 aa8.47□□□□□ -1.05
EPHA4-206ENST00000424339 ABCF2Q9UG63 623 aa8.47□□□□□ -1.05
EPHA4-206ENST00000424339 SERPINA10Q9UK55 444 aa8.47□□□□□ -1.05
EPHA4-206ENST00000424339 ZNF541Q9H0D2 1346 aa8.47□□□□□ -1.05
EPHA4-206ENST00000424339 FIGNL2A6NMB9 653 aa8.46□□□□□ -1.06
EPHA4-206ENST00000424339 TTLL8A6PVC2 850 aa8.46□□□□□ -1.06
EPHA4-206ENST00000424339 IDH1O75874 414 aaKnown RBP8.46□□□□□ -1.06
EPHA4-206ENST00000424339 ZNF280AP59817 542 aaPredicted RBP8.46□□□□□ -1.06
EPHA4-206ENST00000424339 UBE3CQ15386 1083 aa8.46□□□□□ -1.06
EPHA4-206ENST00000424339 CASC1Q6TDU7 716 aa8.46□□□□□ -1.06
EPHA4-206ENST00000424339 PI16Q6UXB8 463 aa8.46□□□□□ -1.06
EPHA4-206ENST00000424339 MTMR14Q8NCE2 650 aa8.46□□□□□ -1.06
EPHA4-206ENST00000424339 NOL10Q9BSC4 688 aaKnown RBP8.46□□□□□ -1.06
EPHA4-206ENST00000424339 FSD1Q9BTV5 496 aa8.46□□□□□ -1.06
EPHA4-206ENST00000424339 SNRKQ9NRH2 765 aa8.46□□□□□ -1.06
EPHA4-206ENST00000424339 GPRC5DQ9NZD1 345 aa8.46□□□□□ -1.06
EPHA4-206ENST00000424339 RAI14Q9P0K7 980 aa8.46□□□□□ -1.06
EPHA4-206ENST00000424339 TTF2Q9UNY4 1162 aaKnown RBP8.46□□□□□ -1.06
EPHA4-206ENST00000424339 GJA3Q9Y6H8 435 aa8.46□□□□□ -1.06
EPHA4-206ENST00000424339 MYH2Q9UKX2 1941 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 MYO1BO43795 1136 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 ARHGEF15O94989 841 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 BAG3O95817 575 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 PRDX5P30044 214 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 RGS3P49796 1198 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 GMPSP49915 693 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-206ENST00000424339 SCNN1DP51172 638 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 MFAP1P55081 439 aaKnown RBP8.45□□□□□ -1.06
EPHA4-206ENST00000424339 MECOMQ03112 1051 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 RNFT1Q5M7Z0 435 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 SLC9C2Q5TAH2 1124 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 TSHZ3Q63HK5 1081 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 NAA16Q6N069 864 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-206ENST00000424339 LYPD8Q6UX82 237 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 PNMA8AQ86V59 439 aaPredicted RBP8.45□□□□□ -1.06
EPHA4-206ENST00000424339 KIAA0825Q8IV33 1275 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 CERS5Q8N5B7 392 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 SPIRE2Q8WWL2 714 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 RUFY2Q8WXA3 655 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 NSUN4Q96CB9 384 aaKnown RBP8.45□□□□□ -1.06
EPHA4-206ENST00000424339 ZDHHC15Q96MV8 337 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 KCNQ5Q9NR82 932 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 ADARB2Q9NS39 739 aaKnown RBP8.45□□□□□ -1.06
EPHA4-206ENST00000424339 HACL1Q9UJ83 578 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 GAKO14976 1311 aa8.45□□□□□ -1.06
EPHA4-206ENST00000424339 DDNO94850 711 aaPredicted RBP8.44□□□□□ -1.06
EPHA4-206ENST00000424339 SLURP2P0DP57 97 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 GSPT1P15170 499 aaKnown RBP8.44□□□□□ -1.06
EPHA4-206ENST00000424339 VEGFAP15692 232 aaPredicted RBP8.44□□□□□ -1.06
EPHA4-206ENST00000424339 PDE6AP16499 860 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 SDSP20132 328 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 ADD2P35612 726 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 DLGAP5Q15398 846 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 TBC1D9Q6ZT07 1266 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 USP50Q70EL3 339 aaPredicted RBP8.44□□□□□ -1.06
EPHA4-206ENST00000424339 BPHLQ86WA6 291 aaPredicted RBP8.44□□□□□ -1.06
EPHA4-206ENST00000424339 CCDC155Q8N6L0 562 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 ZC3H15Q8WU90 426 aaKnown RBP8.44□□□□□ -1.06
EPHA4-206ENST00000424339 APPBP2Q92624 585 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 RILPL2Q969X0 211 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 CCDC102AQ96A19 550 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 ANTXR1Q9H6X2 564 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 PIH1D3Q9NQM4 214 aaKnown RBP8.44□□□□□ -1.06
EPHA4-206ENST00000424339 TMOD2Q9NZR1 351 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 CNOT7Q9UIV1 285 aaKnown RBP8.44□□□□□ -1.06
EPHA4-206ENST00000424339 MROH7-TTC4A0A0A0MT08 1334 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 RAD50Q92878 1312 aa8.44□□□□□ -1.06
EPHA4-206ENST00000424339 ECM29Q5VYK3 1845 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 GPR75-ASB3A0A0A6YYF3 556 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 MOXD2PA6NHM9 499 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 RNF113AO15541 343 aaKnown RBP8.43□□□□□ -1.06
EPHA4-206ENST00000424339 GNAT2P19087 354 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 CYP7A1P22680 504 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 SSTR3P32745 418 aaPredicted RBP8.43□□□□□ -1.06
EPHA4-206ENST00000424339 CRKP46108 304 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 TNFAIP1Q13829 316 aa8.43□□□□□ -1.06
EPHA4-206ENST00000424339 FKBP1CQ5VVH2 108 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms