RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 ITGA6P23229 1130 aa10.1□□□□□ -0.79
CLCN3P1-201ENST00000423965 CACNB2Q08289 660 aaPredicted RBP10.1□□□□□ -0.79
CLCN3P1-201ENST00000423965 GADL1Q6ZQY3 521 aa10.1□□□□□ -0.79
CLCN3P1-201ENST00000423965 METTL22Q9BUU2 404 aaPredicted RBP10.1□□□□□ -0.79
CLCN3P1-201ENST00000423965 AGTPBP1Q9UPW5 1226 aa10.1□□□□□ -0.79
CLCN3P1-201ENST00000423965 ZHX2Q9Y6X8 837 aa10.1□□□□□ -0.79
CLCN3P1-201ENST00000423965 SNAP23O00161 211 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 DNM1LO00429 736 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 CHL1O00533 1208 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 CYP2B6P20813 491 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 CACNB3P54284 484 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 NHLH1Q02575 133 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 CNGB1Q14028 1251 aaPredicted RBP10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 CCDC85BQ15834 202 aaPredicted RBP10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 KRT24Q2M2I5 525 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 MSS51Q4VC12 460 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 TDRD7Q8NHU6 1098 aaKnown RBP10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 FAM151AQ8WW52 585 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 SOCS4Q8WXH5 440 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 TEKT1Q969V4 418 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 ZDHHC15Q96MV8 337 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 NUDT12Q9BQG2 462 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 LTBP2Q14767 1821 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 ZDBF2Q9HCK1 2354 aa10.09□□□□□ -0.79
CLCN3P1-201ENST00000423965 PRR33A8MZF0 331 aa10.08□□□□□ -0.8
CLCN3P1-201ENST00000423965 PI4K2BG5E9Z4 385 aa10.08□□□□□ -0.8
CLCN3P1-201ENST00000423965 MSCO60682 206 aa10.08□□□□□ -0.8
CLCN3P1-201ENST00000423965 TAF5LO75529 589 aa10.08□□□□□ -0.8
CLCN3P1-201ENST00000423965 ZKSCAN1P17029 563 aaPredicted RBP10.08□□□□□ -0.8
CLCN3P1-201ENST00000423965 PTPRAP18433 802 aa10.08□□□□□ -0.8
CLCN3P1-201ENST00000423965 SLC39A5Q6ZMH5 540 aa10.08□□□□□ -0.8
CLCN3P1-201ENST00000423965 PRDM12Q9H4Q4 367 aa10.08□□□□□ -0.8
CLCN3P1-201ENST00000423965 PRDM5Q9NQX1 630 aaPredicted RBP10.08□□□□□ -0.8
CLCN3P1-201ENST00000423965 PICK1Q9NRD5 415 aa10.08□□□□□ -0.8
CLCN3P1-201ENST00000423965 PCDHGC3Q9UN70 934 aa10.08□□□□□ -0.8
CLCN3P1-201ENST00000423965 ATP11BQ9Y2G3 1177 aa10.08□□□□□ -0.8
CLCN3P1-201ENST00000423965 V9GY48 417 aaPredicted RBP10.08□□□□□ -0.8
CLCN3P1-201ENST00000423965 MAPK8IP3Q9UPT6 1336 aa10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 MAST2Q6P0Q8 1798 aa10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 CSF1RP07333 972 aa10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 PPP2R1AP30153 589 aa10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 CCND3P30281 292 aaPredicted RBP10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 SLC19A1P41440 591 aa10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 RIPK4P57078 832 aa10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 LMOD3Q0VAK6 560 aa10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 ADGRE1Q14246 886 aa10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 C1orf53Q5VUE5 145 aa10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 APOBEC3HQ6NTF7 200 aaKnown RBP10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 SCYL3Q8IZE3 742 aa10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 LPAR1Q92633 364 aa10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 PLA2G12BQ9BX93 195 aa10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 FCF1Q9Y324 198 aaKnown RBP10.07□□□□□ -0.8
CLCN3P1-201ENST00000423965 TRIM43BA6NCK2 446 aa10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 ERC2O15083 957 aa10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 DDX58O95786 925 aaKnown RBP10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 IGFBP4P22692 258 aa10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 PABPC4Q13310 644 aaKnown RBP eCLIP10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 SNX17Q15036 470 aa10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 TBC1D22AQ8WUA7 517 aa10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 HERVK_113Q902F9 699 aa10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 TRIM43Q96BQ3 446 aaPredicted RBP10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 IRX2Q9BZI1 471 aaPredicted RBP10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 KDM4CQ9H3R0 1056 aa10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 PDLIM7Q9NR12 457 aa10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 MORF4L1Q9UBU8 362 aa10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 TACC3Q9Y6A5 838 aa10.06□□□□□ -0.8
CLCN3P1-201ENST00000423965 CHD9Q3L8U1 2897 aa10.05□□□□□ -0.8
CLCN3P1-201ENST00000423965 FAM86C2PA6NEL3 165 aa10.05□□□□□ -0.8
CLCN3P1-201ENST00000423965 PHF20L1A8MW92 1017 aa10.05□□□□□ -0.8
CLCN3P1-201ENST00000423965 H7C1W4 665 aa10.05□□□□□ -0.8
CLCN3P1-201ENST00000423965 HIBADHP31937 336 aaKnown RBP10.05□□□□□ -0.8
CLCN3P1-201ENST00000423965 PROCA1Q8NCQ7 364 aaPredicted RBP10.05□□□□□ -0.8
CLCN3P1-201ENST00000423965 ARRDC4Q8NCT1 418 aa10.05□□□□□ -0.8
CLCN3P1-201ENST00000423965 USP6NLQ92738 828 aa10.05□□□□□ -0.8
CLCN3P1-201ENST00000423965 PHAXQ9H814 394 aaKnown RBP10.05□□□□□ -0.8
CLCN3P1-201ENST00000423965 DDX20Q9UHI6 824 aaKnown RBP10.05□□□□□ -0.8
CLCN3P1-201ENST00000423965 MYH3P11055 1940 aa10.05□□□□□ -0.8
CLCN3P1-201ENST00000423965 SPEF2Q9C093 1822 aa10.05□□□□□ -0.8
CLCN3P1-201ENST00000423965 MYBBP1AQ9BQG0 1328 aaKnown RBP10.05□□□□□ -0.8
CLCN3P1-201ENST00000423965 ANKRD18BA2A2Z9 1011 aa10.04□□□□□ -0.8
CLCN3P1-201ENST00000423965 IGKV5-2P06315 115 aa10.04□□□□□ -0.8
CLCN3P1-201ENST00000423965 RGS2P41220 211 aa10.04□□□□□ -0.8
CLCN3P1-201ENST00000423965 KCNQ1P51787 676 aa10.04□□□□□ -0.8
CLCN3P1-201ENST00000423965 EPHB4P54760 987 aa10.04□□□□□ -0.8
CLCN3P1-201ENST00000423965 TFF2Q03403 129 aa10.04□□□□□ -0.8
CLCN3P1-201ENST00000423965 PLA2G2CQ5R387 149 aa10.04□□□□□ -0.8
CLCN3P1-201ENST00000423965 HHIPL2Q6UWX4 724 aa10.04□□□□□ -0.8
CLCN3P1-201ENST00000423965 SH3RF1Q7Z6J0 888 aa10.04□□□□□ -0.8
CLCN3P1-201ENST00000423965 RETREG3Q86VR2 466 aa10.04□□□□□ -0.8
CLCN3P1-201ENST00000423965 SUGT1Q9Y2Z0 365 aa10.04□□□□□ -0.8
CLCN3P1-201ENST00000423965 MAST3O60307 1309 aa10.04□□□□□ -0.8
CLCN3P1-201ENST00000423965 TRIM75PA6NK02 468 aa10.03□□□□□ -0.8
CLCN3P1-201ENST00000423965 CTNND1O60716 968 aaKnown RBP10.03□□□□□ -0.8
CLCN3P1-201ENST00000423965 MAPK4P31152 587 aa10.03□□□□□ -0.8
CLCN3P1-201ENST00000423965 FPGSQ05932 587 aa10.03□□□□□ -0.8
CLCN3P1-201ENST00000423965 MTMR2Q13614 643 aa10.03□□□□□ -0.8
CLCN3P1-201ENST00000423965 GRIK5Q16478 980 aa10.03□□□□□ -0.8
CLCN3P1-201ENST00000423965 CSPP1Q1MSJ5 1256 aa10.03□□□□□ -0.8
CLCN3P1-201ENST00000423965 TRIM60Q495X7 471 aa10.03□□□□□ -0.8
CLCN3P1-201ENST00000423965 TREML2Q5T2D2 321 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms