RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 GJD3Q8N144 294 aa15□□□□□ -0.01
UFD1-203ENST00000421968 TOX2Q96NM4 488 aa15□□□□□ -0.01
UFD1-203ENST00000421968 DDX4Q9NQI0 724 aaKnown RBP15□□□□□ -0.01
UFD1-203ENST00000421968 ZFHX2Q9C0A1 2572 aaPredicted RBP15□□□□□ -0.01
UFD1-203ENST00000421968 MYH13Q9UKX3 1938 aa15□□□□□ -0.01
UFD1-203ENST00000421968 RFXAPO00287 272 aa14.99□□□□□ -0.01
UFD1-203ENST00000421968 POU3F3P20264 500 aaPredicted RBP14.99□□□□□ -0.01
UFD1-203ENST00000421968 SSTR3P32745 418 aaPredicted RBP14.99□□□□□ -0.01
UFD1-203ENST00000421968 GNAI1P63096 354 aa14.99□□□□□ -0.01
UFD1-203ENST00000421968 METTL24Q5JXM2 366 aa14.99□□□□□ -0.01
UFD1-203ENST00000421968 ANKRD33Q7Z3H0 272 aa14.99□□□□□ -0.01
UFD1-203ENST00000421968 TSPYL6Q8N831 410 aa14.99□□□□□ -0.01
UFD1-203ENST00000421968 MTIF3Q9H2K0 278 aaKnown RBP14.99□□□□□ -0.01
UFD1-203ENST00000421968 IFT57Q9NWB7 429 aa14.99□□□□□ -0.01
UFD1-203ENST00000421968 RFX7Q2KHR2 1363 aa14.98□□□□□ -0.01
UFD1-203ENST00000421968 ZNF521Q96K83 1311 aa14.98□□□□□ -0.01
UFD1-203ENST00000421968 A0A1W2PQ45 241 aaPredicted RBP14.98□□□□□ -0.01
UFD1-203ENST00000421968 A0A1W2PQY0 241 aa14.98□□□□□ -0.01
UFD1-203ENST00000421968 IGHA2P01877 340 aa14.98□□□□□ -0.01
UFD1-203ENST00000421968 SLC5A1P13866 664 aa14.98□□□□□ -0.01
UFD1-203ENST00000421968 RABGGTBP53611 331 aa14.98□□□□□ -0.01
UFD1-203ENST00000421968 GRB14Q14449 540 aa14.98□□□□□ -0.01
UFD1-203ENST00000421968 DPP9Q86TI2 863 aa14.98□□□□□ -0.01
UFD1-203ENST00000421968 TMEM199Q8N511 208 aa14.98□□□□□ -0.01
UFD1-203ENST00000421968 WDR18Q9BV38 432 aa14.98□□□□□ -0.01
UFD1-203ENST00000421968 TBX21Q9UL17 535 aa14.98□□□□□ -0.01
UFD1-203ENST00000421968 RABGAP1Q9Y3P9 1069 aa14.98□□□□□ -0.01
UFD1-203ENST00000421968 SMCHD1A6NHR9 2005 aa14.98□□□□□ -0.01
UFD1-203ENST00000421968 USP34Q70CQ2 3546 aa14.97□□□□□ -0.01
UFD1-203ENST00000421968 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
UFD1-203ENST00000421968 FKBP5Q13451 457 aaPredicted RBP14.97□□□□□ -0.01
UFD1-203ENST00000421968 RRP1BQ14684 758 aaKnown RBP14.97□□□□□ -0.01
UFD1-203ENST00000421968 PRAMEF19Q5SWL8 479 aa14.97□□□□□ -0.01
UFD1-203ENST00000421968 OLFML2BQ68BL8 750 aa14.97□□□□□ -0.01
UFD1-203ENST00000421968 KRT40Q6A162 431 aa14.97□□□□□ -0.01
UFD1-203ENST00000421968 RNF180Q86T96 592 aa14.97□□□□□ -0.01
UFD1-203ENST00000421968 RUNDC1Q96C34 613 aa14.97□□□□□ -0.01
UFD1-203ENST00000421968 XPNPEP3Q9NQH7 507 aa14.97□□□□□ -0.01
UFD1-203ENST00000421968 MYH2Q9UKX2 1941 aa14.97□□□□□ -0.01
UFD1-203ENST00000421968 C19orf81C9J6K1 198 aa14.96□□□□□ -0.01
UFD1-203ENST00000421968 CNMDO75829 334 aa14.96□□□□□ -0.01
UFD1-203ENST00000421968 PDE8BO95263 885 aa14.96□□□□□ -0.01
UFD1-203ENST00000421968 IFIT1P09914 478 aaKnown RBP14.96□□□□□ -0.01
UFD1-203ENST00000421968 MYOGP15173 224 aa14.96□□□□□ -0.01
UFD1-203ENST00000421968 ANKS1AQ92625 1134 aa14.96□□□□□ -0.01
UFD1-203ENST00000421968 PGK1P00558 417 aa14.95□□□□□ -0.02
UFD1-203ENST00000421968 FLIIQ13045 1269 aa14.95□□□□□ -0.02
UFD1-203ENST00000421968 LRRC24Q50LG9 513 aa14.95□□□□□ -0.02
UFD1-203ENST00000421968 FAM178BQ8IXR5 827 aa14.95□□□□□ -0.02
UFD1-203ENST00000421968 STARD7Q9NQZ5 370 aa14.95□□□□□ -0.02
UFD1-203ENST00000421968 A0A0G2JMZ2 1700 aa14.95□□□□□ -0.02
UFD1-203ENST00000421968 USP17L10C9JJH3 530 aa14.94□□□□□ -0.02
UFD1-203ENST00000421968 DCXO43602 365 aa14.94□□□□□ -0.02
UFD1-203ENST00000421968 FGBP02675 491 aa14.94□□□□□ -0.02
UFD1-203ENST00000421968 RARBP10826 455 aa14.94□□□□□ -0.02
UFD1-203ENST00000421968 VGLL2Q8N8G2 317 aa14.94□□□□□ -0.02
UFD1-203ENST00000421968 PPP1R12CQ9BZL4 782 aa14.94□□□□□ -0.02
UFD1-203ENST00000421968 CERS4Q9HA82 394 aa14.94□□□□□ -0.02
UFD1-203ENST00000421968 IL23AQ9NPF7 189 aa14.94□□□□□ -0.02
UFD1-203ENST00000421968 PCDHA11Q9Y5I1 949 aa14.94□□□□□ -0.02
UFD1-203ENST00000421968 KIF16BQ96L93 1317 aa14.93□□□□□ -0.02
UFD1-203ENST00000421968 GFRA3O60609 400 aa14.93□□□□□ -0.02
UFD1-203ENST00000421968 ADORA2AP29274 412 aa14.93□□□□□ -0.02
UFD1-203ENST00000421968 HFE2Q6ZVN8 426 aa14.93□□□□□ -0.02
UFD1-203ENST00000421968 OTOP2Q7RTS6 562 aa14.93□□□□□ -0.02
UFD1-203ENST00000421968 MFSD14AQ96MC6 490 aa14.93□□□□□ -0.02
UFD1-203ENST00000421968 GAKO14976 1311 aa14.92□□□□□ -0.02
UFD1-203ENST00000421968 GRM8O00222 908 aa14.92□□□□□ -0.02
UFD1-203ENST00000421968 ASNSP08243 561 aa14.92□□□□□ -0.02
UFD1-203ENST00000421968 CALD1Q05682 793 aaKnown RBP14.92□□□□□ -0.02
UFD1-203ENST00000421968 PUM3Q15397 648 aaKnown RBP14.92□□□□□ -0.02
UFD1-203ENST00000421968 NUP133Q8WUM0 1156 aa14.92□□□□□ -0.02
UFD1-203ENST00000421968 PCGF6Q9BYE7 350 aa14.92□□□□□ -0.02
UFD1-203ENST00000421968 EPOPA6NHQ4 379 aa14.91□□□□□ -0.02
UFD1-203ENST00000421968 BTDP43251 543 aa14.91□□□□□ -0.02
UFD1-203ENST00000421968 PTPN5P54829 565 aa14.91□□□□□ -0.02
UFD1-203ENST00000421968 SAMD1Q6SPF0 538 aaPredicted RBP14.91□□□□□ -0.02
UFD1-203ENST00000421968 EMILIN3Q9NT22 766 aa14.91□□□□□ -0.02
UFD1-203ENST00000421968 SLC4A7Q9Y6M7 1214 aa14.91□□□□□ -0.02
UFD1-203ENST00000421968 MROH7Q68CQ1 1323 aa14.91□□□□□ -0.02
UFD1-203ENST00000421968 RIF1Q5UIP0 2472 aaKnown RBP14.9□□□□□ -0.02
UFD1-203ENST00000421968 FGFR2P21802 821 aa14.9□□□□□ -0.02
UFD1-203ENST00000421968 CYP2C18P33260 490 aa14.9□□□□□ -0.02
UFD1-203ENST00000421968 ACLYP53396 1101 aa14.9□□□□□ -0.02
UFD1-203ENST00000421968 ERMP1Q7Z2K6 904 aa14.9□□□□□ -0.02
UFD1-203ENST00000421968 DZIP1Q86YF9 867 aaKnown RBP14.9□□□□□ -0.02
UFD1-203ENST00000421968 PRSS33Q8NF86 280 aa14.9□□□□□ -0.02
UFD1-203ENST00000421968 SLC5A4Q9NY91 659 aa14.9□□□□□ -0.02
UFD1-203ENST00000421968 C9orf78Q9NZ63 289 aaPredicted RBP14.9□□□□□ -0.02
UFD1-203ENST00000421968 BTBD7Q9P203 1132 aa14.9□□□□□ -0.02
UFD1-203ENST00000421968 CACNA1HO95180 2353 aa14.9□□□□□ -0.02
UFD1-203ENST00000421968 EPG5Q9HCE0 2579 aa14.89□□□□□ -0.03
UFD1-203ENST00000421968 POTEB3A0JP26 581 aa14.89□□□□□ -0.03
UFD1-203ENST00000421968 USP17L15C9J2P7 530 aa14.89□□□□□ -0.03
UFD1-203ENST00000421968 USP17L13C9JLJ4 530 aa14.89□□□□□ -0.03
UFD1-203ENST00000421968 USP17L11C9JVI0 530 aa14.89□□□□□ -0.03
UFD1-203ENST00000421968 USP17L18D6R9N7 530 aa14.89□□□□□ -0.03
UFD1-203ENST00000421968 USP17L22D6RA61 530 aa14.89□□□□□ -0.03
UFD1-203ENST00000421968 USP17L17D6RBQ6 530 aa14.89□□□□□ -0.03
UFD1-203ENST00000421968 USP17L19D6RCP7 530 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms