RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CNKSR2Q8WXI2 1034 aa18.51■□□□□ 0.55
DDX55-203ENST00000421670 UBAC1Q9BSL1 405 aa18.51■□□□□ 0.55
DDX55-203ENST00000421670 CYP46A1Q9Y6A2 500 aa18.51■□□□□ 0.55
DDX55-203ENST00000421670 TMEM88BA6NKF7 163 aa18.5■□□□□ 0.55
DDX55-203ENST00000421670 PTPRAP18433 802 aa18.5■□□□□ 0.55
DDX55-203ENST00000421670 NT5C2P49902 561 aa18.5■□□□□ 0.55
DDX55-203ENST00000421670 ICA1Q05084 483 aa18.5■□□□□ 0.55
DDX55-203ENST00000421670 SAPCD2Q86UD0 394 aa18.5■□□□□ 0.55
DDX55-203ENST00000421670 ZSCAN10Q96SZ4 725 aaPredicted RBP18.5■□□□□ 0.55
DDX55-203ENST00000421670 GPHNQ9NQX3 736 aaPredicted RBP18.5■□□□□ 0.55
DDX55-203ENST00000421670 STX8Q9UNK0 236 aa18.5■□□□□ 0.55
DDX55-203ENST00000421670 IFIT3O14879 490 aaKnown RBP18.49■□□□□ 0.55
DDX55-203ENST00000421670 EXOSC10Q01780 885 aaKnown RBP18.49■□□□□ 0.55
DDX55-203ENST00000421670 ATP2B2Q01814 1243 aa18.49■□□□□ 0.55
DDX55-203ENST00000421670 ENAHQ8N8S7 591 aaPredicted RBP18.49■□□□□ 0.55
DDX55-203ENST00000421670 MTMR4Q9NYA4 1195 aa18.49■□□□□ 0.55
DDX55-203ENST00000421670 ABT1Q9ULW3 272 aaKnown RBP18.49■□□□□ 0.55
DDX55-203ENST00000421670 LOC285556D6RIA3 1793 aa18.49■□□□□ 0.55
DDX55-203ENST00000421670 RCSD1Q6JBY9 416 aa18.48■□□□□ 0.55
DDX55-203ENST00000421670 OTUD5Q96G74 571 aa18.48■□□□□ 0.55
DDX55-203ENST00000421670 KANSL2Q9H9L4 492 aa18.48■□□□□ 0.55
DDX55-203ENST00000421670 SENP2Q9HC62 589 aa18.48■□□□□ 0.55
DDX55-203ENST00000421670 GINM1Q9NU53 330 aa18.48■□□□□ 0.55
DDX55-203ENST00000421670 TCP11L1Q9NUJ3 509 aa18.48■□□□□ 0.55
DDX55-203ENST00000421670 TLL2Q9Y6L7 1015 aa18.48■□□□□ 0.55
DDX55-203ENST00000421670 USP17L5A8MUK1 530 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 EEF2P13639 858 aaKnown RBP18.47■□□□□ 0.55
DDX55-203ENST00000421670 ECE1P42892 770 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 APLP1P51693 650 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 SART3Q15020 963 aaKnown RBP18.47■□□□□ 0.55
DDX55-203ENST00000421670 TMEM67Q5HYA8 995 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 SIAH1Q8IUQ4 282 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 ACER1Q8TDN7 264 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 OPTNQ96CV9 577 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 ZHX2Q9Y6X8 837 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 CEP350Q5VT06 3117 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 WDR19Q8NEZ3 1342 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 SPDYE5A6NIY4 337 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 SH2B2O14492 632 aaPredicted RBP18.47■□□□□ 0.55
DDX55-203ENST00000421670 TTLL1O95922 423 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 NEK4P51957 841 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 SEC23AQ15436 765 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 Q6ZUG5 572 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 ERO1BQ86YB8 467 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 LRRC47Q8N1G4 583 aaKnown RBP18.47■□□□□ 0.55
DDX55-203ENST00000421670 IGDCC4Q8TDY8 1250 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 SLC10A4Q96EP9 437 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 TMEM87BQ96K49 555 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 LY9Q9HBG7 655 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 CLIP2Q9UDT6 1046 aa18.47■□□□□ 0.55
DDX55-203ENST00000421670 A0A1W2PRG0 241 aa18.46■□□□□ 0.55
DDX55-203ENST00000421670 ERICH2A1L162 156 aa18.46■□□□□ 0.55
DDX55-203ENST00000421670 UNCXA6NJT0 531 aa18.46■□□□□ 0.55
DDX55-203ENST00000421670 TRIM75PA6NK02 468 aa18.46■□□□□ 0.55
DDX55-203ENST00000421670 FGD1P98174 961 aa18.46■□□□□ 0.55
DDX55-203ENST00000421670 WTAPQ15007 396 aa18.46■□□□□ 0.55
DDX55-203ENST00000421670 IFIT1BQ5T764 474 aaKnown RBP18.46■□□□□ 0.55
DDX55-203ENST00000421670 PDRG1Q9NUG6 133 aa18.46■□□□□ 0.55
DDX55-203ENST00000421670 GJA5P36382 358 aa18.45■□□□□ 0.54
DDX55-203ENST00000421670 NOVP48745 357 aa18.45■□□□□ 0.54
DDX55-203ENST00000421670 MKRN3Q13064 507 aaKnown RBP18.45■□□□□ 0.54
DDX55-203ENST00000421670 RABEP1Q15276 862 aa18.45■□□□□ 0.54
DDX55-203ENST00000421670 ZYXQ15942 572 aaKnown RBP18.45■□□□□ 0.54
DDX55-203ENST00000421670 TTC14Q96N46 770 aa18.45■□□□□ 0.54
DDX55-203ENST00000421670 ARHGEF10LQ9HCE6 1279 aa18.45■□□□□ 0.54
DDX55-203ENST00000421670 NYAP2Q9P242 653 aa18.45■□□□□ 0.54
DDX55-203ENST00000421670 IRF6O14896 467 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 ZNF157P51786 506 aaPredicted RBP18.44■□□□□ 0.54
DDX55-203ENST00000421670 PPATQ06203 517 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 SPP2Q13103 211 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 DGKZQ13574 1117 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 MTMR2Q13614 643 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 TOB2Q14106 344 aaPredicted RBP18.44■□□□□ 0.54
DDX55-203ENST00000421670 RASGRP2Q7LDG7 609 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 DGKHQ86XP1 1220 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 ZNF280CQ8ND82 737 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 BRF1Q92994 677 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 CHMP4CQ96CF2 233 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 WNK4Q96J92 1243 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 FEZ1Q99689 392 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 TMEM47Q9BQJ4 181 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 MTA3Q9BTC8 594 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 AS3MTQ9HBK9 375 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 CREBZFQ9NS37 354 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 AFG3L2Q9Y4W6 797 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 PARP14Q460N5 1801 aa18.44■□□□□ 0.54
DDX55-203ENST00000421670 PPIL2Q13356 520 aa18.43■□□□□ 0.54
DDX55-203ENST00000421670 CCDC178Q5BJE1 867 aa18.43■□□□□ 0.54
DDX55-203ENST00000421670 RGMBQ6NW40 437 aa18.43■□□□□ 0.54
DDX55-203ENST00000421670 NOL8Q76FK4 1167 aaKnown RBP18.43■□□□□ 0.54
DDX55-203ENST00000421670 RASAL3Q86YV0 1011 aa18.43■□□□□ 0.54
DDX55-203ENST00000421670 LARP6Q9BRS8 491 aaKnown RBP18.43■□□□□ 0.54
DDX55-203ENST00000421670 WDR18Q9BV38 432 aa18.43■□□□□ 0.54
DDX55-203ENST00000421670 KAT14Q9H8E8 782 aa18.43■□□□□ 0.54
DDX55-203ENST00000421670 MTMR7Q9Y216 660 aa18.43■□□□□ 0.54
DDX55-203ENST00000421670 RAD21O60216 631 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 TOP1P11387 765 aaKnown RBP18.42■□□□□ 0.54
DDX55-203ENST00000421670 AK2P54819 239 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 HTRA3P83110 453 aa18.42■□□□□ 0.54
DDX55-203ENST00000421670 APOBRQ0VD83 1088 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms