RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 STK31Q9BXU1 1019 aa7.11□□□□□ -1.27
HDAC8-212ENST00000421523 CHMP3Q9Y3E7 222 aa7.11□□□□□ -1.27
HDAC8-212ENST00000421523 CACNA1HO95180 2353 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 ANKRD18BA2A2Z9 1011 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 SOWAHBA6NEL2 793 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 EPOPA6NHQ4 379 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 TIMP1P01033 207 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 CYBAP13498 195 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 CSF2RAP15509 400 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 HERVK_113P62684 666 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 ERVK-9P63128 1117 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 ERVK-24P63145 666 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 FAAP100Q0VG06 881 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 NEXNQ0ZGT2 675 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 MAP2K5Q13163 448 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 PPIGQ13427 754 aaKnown RBP eCLIP7.1□□□□□ -1.27
HDAC8-212ENST00000421523 LRRC41Q15345 812 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 FAM47AQ5JRC9 791 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 BEND3Q5T5X7 828 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 C1orf53Q5VUE5 145 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 CDC42EP5Q6NZY7 148 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 PSRC1Q6PGN9 363 aaPredicted RBP7.1□□□□□ -1.27
HDAC8-212ENST00000421523 VPS37DQ86XT2 251 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 ZSCAN29Q8IWY8 852 aaPredicted RBP7.1□□□□□ -1.27
HDAC8-212ENST00000421523 FAM178BQ8IXR5 827 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 DNAAF4Q8WXU2 420 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 EDC3Q96F86 508 aaKnown RBP7.1□□□□□ -1.27
HDAC8-212ENST00000421523 MFSD14AQ96MC6 490 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 FAM198AQ9UFP1 575 aa7.1□□□□□ -1.27
HDAC8-212ENST00000421523 ACACBO00763 2458 aa7.09□□□□□ -1.27
HDAC8-212ENST00000421523 ZNF521Q96K83 1311 aa7.09□□□□□ -1.27
HDAC8-212ENST00000421523 MED19A0JLT2 244 aaPredicted RBP7.09□□□□□ -1.27
HDAC8-212ENST00000421523 FAM196BA6NMK8 535 aa7.09□□□□□ -1.27
HDAC8-212ENST00000421523 IL9P15248 144 aa7.09□□□□□ -1.27
HDAC8-212ENST00000421523 ID4P47928 161 aa7.09□□□□□ -1.27
HDAC8-212ENST00000421523 EXOSC9Q06265 439 aaKnown RBP7.09□□□□□ -1.27
HDAC8-212ENST00000421523 KCTD2Q14681 263 aa7.09□□□□□ -1.27
HDAC8-212ENST00000421523 DIXDC1Q155Q3 683 aa7.09□□□□□ -1.27
HDAC8-212ENST00000421523 Q3C1V9 767 aa7.09□□□□□ -1.27
HDAC8-212ENST00000421523 MFSD5Q6N075 450 aa7.09□□□□□ -1.27
HDAC8-212ENST00000421523 ZNF280CQ8ND82 737 aa7.09□□□□□ -1.27
HDAC8-212ENST00000421523 TBC1D22AQ8WUA7 517 aa7.09□□□□□ -1.27
HDAC8-212ENST00000421523 FAM84BQ96KN1 310 aaPredicted RBP7.09□□□□□ -1.27
HDAC8-212ENST00000421523 PPP1R12CQ9BZL4 782 aa7.09□□□□□ -1.27
HDAC8-212ENST00000421523 MRS2Q9HD23 443 aa7.09□□□□□ -1.27
HDAC8-212ENST00000421523 ZNF292O60281 2723 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 MAST3O60307 1309 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 FAM186AA6NE01 2351 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 A0A1W2PQ45 241 aaPredicted RBP7.08□□□□□ -1.28
HDAC8-212ENST00000421523 A0A1W2PQY0 241 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 DCDC2CA8MYV0 355 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 F6X3S4 739 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 CTNND1O60716 968 aaKnown RBP7.08□□□□□ -1.28
HDAC8-212ENST00000421523 CA3P07451 260 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 KCNA5P22460 613 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 TCF15Q12870 199 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 IFIT5Q13325 482 aaKnown RBP7.08□□□□□ -1.28
HDAC8-212ENST00000421523 FKBP5Q13451 457 aaPredicted RBP7.08□□□□□ -1.28
HDAC8-212ENST00000421523 MTMR2Q13614 643 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 COL9A2Q14055 689 aaPredicted RBP7.08□□□□□ -1.28
HDAC8-212ENST00000421523 EPHA10Q5JZY3 1008 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 HHIPL2Q6UWX4 724 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 OTOP2Q7RTS6 562 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 ARNTL2Q8WYA1 636 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 KAZALD1Q96I82 304 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 ZNF594Q96JF6 807 aaPredicted RBP7.08□□□□□ -1.28
HDAC8-212ENST00000421523 CNTNAP3BQ96NU0 1288 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 CNTNAP3Q9BZ76 1288 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 MYH16Q9H6N6 1097 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.08□□□□□ -1.28
HDAC8-212ENST00000421523 CNNM1Q9NRU3 951 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 USP40Q9NVE5 1235 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 RBPJLQ9UBG7 517 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 PHF24Q9UPV7 400 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 GVINP1Q7Z2Y8 2422 aa7.08□□□□□ -1.28
HDAC8-212ENST00000421523 COL4A4P53420 1690 aaPredicted RBP7.07□□□□□ -1.28
HDAC8-212ENST00000421523 COL4A6Q14031 1691 aa7.07□□□□□ -1.28
HDAC8-212ENST00000421523 SEPT4O43236 478 aa7.07□□□□□ -1.28
HDAC8-212ENST00000421523 GLRX3O76003 335 aaKnown RBP7.07□□□□□ -1.28
HDAC8-212ENST00000421523 SLC5A1P13866 664 aa7.07□□□□□ -1.28
HDAC8-212ENST00000421523 RGS3P49796 1198 aa7.07□□□□□ -1.28
HDAC8-212ENST00000421523 TAF7LQ5H9L4 462 aa7.07□□□□□ -1.28
HDAC8-212ENST00000421523 PRAMEF19Q5SWL8 479 aa7.07□□□□□ -1.28
HDAC8-212ENST00000421523 PTCRAQ6ISU1 281 aaPredicted RBP7.07□□□□□ -1.28
HDAC8-212ENST00000421523 SH3BP5LQ7L8J4 393 aa7.07□□□□□ -1.28
HDAC8-212ENST00000421523 TMEM199Q8N511 208 aa7.07□□□□□ -1.28
HDAC8-212ENST00000421523 NPLOC4Q8TAT6 608 aa7.07□□□□□ -1.28
HDAC8-212ENST00000421523 SP7Q8TDD2 431 aaPredicted RBP7.07□□□□□ -1.28
HDAC8-212ENST00000421523 ATOH1Q92858 354 aaPredicted RBP7.07□□□□□ -1.28
HDAC8-212ENST00000421523 MTIF3Q9H2K0 278 aaKnown RBP7.07□□□□□ -1.28
HDAC8-212ENST00000421523 UBE2ZQ9H832 354 aaPredicted RBP7.07□□□□□ -1.28
HDAC8-212ENST00000421523 TBX21Q9UL17 535 aa7.07□□□□□ -1.28
HDAC8-212ENST00000421523 ATAD5Q96QE3 1844 aa7.06□□□□□ -1.28
HDAC8-212ENST00000421523 ZNF536O15090 1300 aa7.06□□□□□ -1.28
HDAC8-212ENST00000421523 POTEB3A0JP26 581 aa7.06□□□□□ -1.28
HDAC8-212ENST00000421523 ZNF316A6NFI3 1004 aaPredicted RBP7.06□□□□□ -1.28
HDAC8-212ENST00000421523 DDTLA6NHG4 134 aaPredicted RBP7.06□□□□□ -1.28
HDAC8-212ENST00000421523 ZBBXA8MT70 800 aa7.06□□□□□ -1.28
HDAC8-212ENST00000421523 PGK1P00558 417 aa7.06□□□□□ -1.28
HDAC8-212ENST00000421523 POU3F3P20264 500 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms