RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 ADM5C9JUS6 153 aa25.22■■□□□ 1.63
ABCF3-202ENST00000421340 MPHOSPH10O00566 681 aaKnown RBP25.22■■□□□ 1.63
ABCF3-202ENST00000421340 TTLL1O95922 423 aa25.22■■□□□ 1.63
ABCF3-202ENST00000421340 CALM1P0DP23 149 aa25.22■■□□□ 1.63
ABCF3-202ENST00000421340 CALM2P0DP24 149 aa25.22■■□□□ 1.63
ABCF3-202ENST00000421340 CALM3P0DP25 149 aa25.22■■□□□ 1.63
ABCF3-202ENST00000421340 TOP1P11387 765 aaKnown RBP25.22■■□□□ 1.63
ABCF3-202ENST00000421340 RRP1BQ14684 758 aaKnown RBP25.22■■□□□ 1.63
ABCF3-202ENST00000421340 CATIPQ7Z7H3 387 aa25.22■■□□□ 1.63
ABCF3-202ENST00000421340 MKL1Q969V6 931 aa25.22■■□□□ 1.63
ABCF3-202ENST00000421340 MAP3K14Q99558 947 aa25.22■■□□□ 1.63
ABCF3-202ENST00000421340 NYAP2Q9P242 653 aa25.22■■□□□ 1.63
ABCF3-202ENST00000421340 SYNPO2Q9UMS6 1093 aa25.22■■□□□ 1.63
ABCF3-202ENST00000421340 CLEC11AQ9Y240 323 aa25.22■■□□□ 1.63
ABCF3-202ENST00000421340 NID2Q14112 1375 aa25.21■■□□□ 1.63
ABCF3-202ENST00000421340 ZBTB43O43298 467 aa25.21■■□□□ 1.63
ABCF3-202ENST00000421340 DDAH1O94760 285 aa25.21■■□□□ 1.63
ABCF3-202ENST00000421340 PRAMEF18Q5VWM3 479 aa25.21■■□□□ 1.63
ABCF3-202ENST00000421340 GTF3C6Q969F1 213 aa25.21■■□□□ 1.63
ABCF3-202ENST00000421340 KAT14Q9H8E8 782 aa25.21■■□□□ 1.63
ABCF3-202ENST00000421340 HPS5Q9UPZ3 1129 aa25.21■■□□□ 1.63
ABCF3-202ENST00000421340 DHX16O60231 1041 aaKnown RBP25.2■■□□□ 1.62
ABCF3-202ENST00000421340 LARGE1O95461 756 aa25.2■■□□□ 1.62
ABCF3-202ENST00000421340 GH2P01242 217 aa25.2■■□□□ 1.62
ABCF3-202ENST00000421340 ASNSP08243 561 aa25.2■■□□□ 1.62
ABCF3-202ENST00000421340 GUCY1A2P33402 732 aa25.2■■□□□ 1.62
ABCF3-202ENST00000421340 NF2P35240 595 aa25.2■■□□□ 1.62
ABCF3-202ENST00000421340 ZNF654Q8IZM8 581 aa25.2■■□□□ 1.62
ABCF3-202ENST00000421340 TMEM47Q9BQJ4 181 aa25.2■■□□□ 1.62
ABCF3-202ENST00000421340 NMRK2Q9NPI5 230 aa25.2■■□□□ 1.62
ABCF3-202ENST00000421340 STX8Q9UNK0 236 aa25.2■■□□□ 1.62
ABCF3-202ENST00000421340 GOLGA8BA8MQT2 603 aa25.19■■□□□ 1.62
ABCF3-202ENST00000421340 GDF11O95390 407 aa25.19■■□□□ 1.62
ABCF3-202ENST00000421340 TROAPQ12815 778 aa25.19■■□□□ 1.62
ABCF3-202ENST00000421340 CDCA5Q96FF9 252 aa25.19■■□□□ 1.62
ABCF3-202ENST00000421340 ZBTB21Q9ULJ3 1066 aa25.19■■□□□ 1.62
ABCF3-202ENST00000421340 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.19■■□□□ 1.62
ABCF3-202ENST00000421340 PPP1R12BO60237 982 aaPredicted RBP25.18■■□□□ 1.62
ABCF3-202ENST00000421340 SLC4A3P48751 1232 aa25.18■■□□□ 1.62
ABCF3-202ENST00000421340 JAG1P78504 1218 aa25.18■■□□□ 1.62
ABCF3-202ENST00000421340 SEPT2Q15019 361 aa25.18■■□□□ 1.62
ABCF3-202ENST00000421340 PNMA1Q8ND90 353 aa25.18■■□□□ 1.62
ABCF3-202ENST00000421340 KLRG1Q96E93 195 aa25.18■■□□□ 1.62
ABCF3-202ENST00000421340 LLPHQ9BRT6 129 aaKnown RBP25.18■■□□□ 1.62
ABCF3-202ENST00000421340 CCDC196A0A1B0GTZ2 297 aa25.17■■□□□ 1.62
ABCF3-202ENST00000421340 USP2O75604 605 aaPredicted RBP25.17■■□□□ 1.62
ABCF3-202ENST00000421340 HSP90AA1P07900 732 aaKnown RBP25.17■■□□□ 1.62
ABCF3-202ENST00000421340 METAP2P50579 478 aaKnown RBP eCLIP25.17■■□□□ 1.62
ABCF3-202ENST00000421340 SCRN1Q12765 414 aa25.17■■□□□ 1.62
ABCF3-202ENST00000421340 FANCBQ8NB91 859 aa25.17■■□□□ 1.62
ABCF3-202ENST00000421340 GLIS2Q9BZE0 524 aaPredicted RBP25.17■■□□□ 1.62
ABCF3-202ENST00000421340 CLIP2Q9UDT6 1046 aa25.17■■□□□ 1.62
ABCF3-202ENST00000421340 NAP1L2Q9ULW6 460 aaPredicted RBP25.17■■□□□ 1.62
ABCF3-202ENST00000421340 SSC5DA1L4H1 1573 aa25.17■■□□□ 1.62
ABCF3-202ENST00000421340 GREB1LQ9C091 1923 aaPredicted RBP25.16■■□□□ 1.62
ABCF3-202ENST00000421340 POTEIP0CG38 1075 aa25.16■■□□□ 1.62
ABCF3-202ENST00000421340 POTEJP0CG39 1038 aa25.16■■□□□ 1.62
ABCF3-202ENST00000421340 ICA1Q05084 483 aa25.16■■□□□ 1.62
ABCF3-202ENST00000421340 STK3Q13188 491 aa25.16■■□□□ 1.62
ABCF3-202ENST00000421340 NOL9Q5SY16 702 aaKnown RBP25.16■■□□□ 1.62
ABCF3-202ENST00000421340 SIAH1Q8IUQ4 282 aa25.16■■□□□ 1.62
ABCF3-202ENST00000421340 CCDC83Q8IWF9 413 aa25.16■■□□□ 1.62
ABCF3-202ENST00000421340 NECAB1Q8N987 351 aa25.16■■□□□ 1.62
ABCF3-202ENST00000421340 EEF2P13639 858 aaKnown RBP25.15■■□□□ 1.62
ABCF3-202ENST00000421340 ST3GAL1Q11201 340 aa25.15■■□□□ 1.62
ABCF3-202ENST00000421340 RAB3GAP1Q15042 981 aa25.15■■□□□ 1.62
ABCF3-202ENST00000421340 MAP3K11Q16584 847 aa25.15■■□□□ 1.62
ABCF3-202ENST00000421340 CWC22Q9HCG8 908 aaKnown RBP25.15■■□□□ 1.62
ABCF3-202ENST00000421340 RBM28Q9NW13 759 aaKnown RBP25.15■■□□□ 1.62
ABCF3-202ENST00000421340 UNCXA6NJT0 531 aa25.14■■□□□ 1.62
ABCF3-202ENST00000421340 GOLGA8AA7E2F4 631 aa25.14■■□□□ 1.62
ABCF3-202ENST00000421340 CCT2P78371 535 aaKnown RBP25.14■■□□□ 1.62
ABCF3-202ENST00000421340 MAP3K9P80192 1104 aa25.14■■□□□ 1.62
ABCF3-202ENST00000421340 SHROOM1Q2M3G4 852 aaPredicted RBP25.14■■□□□ 1.62
ABCF3-202ENST00000421340 MAP1SQ66K74 1059 aaPredicted RBP25.14■■□□□ 1.62
ABCF3-202ENST00000421340 MICU3Q86XE3 530 aa25.14■■□□□ 1.62
ABCF3-202ENST00000421340 SCYL3Q8IZE3 742 aa25.14■■□□□ 1.62
ABCF3-202ENST00000421340 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.14■■□□□ 1.62
ABCF3-202ENST00000421340 WRNIP1Q96S55 665 aa25.14■■□□□ 1.62
ABCF3-202ENST00000421340 ARHGEF10LQ9HCE6 1279 aa25.14■■□□□ 1.62
ABCF3-202ENST00000421340 FAM217BQ9NTX9 383 aaPredicted RBP25.14■■□□□ 1.62
ABCF3-202ENST00000421340 KIF5BP33176 963 aa25.13■■□□□ 1.61
ABCF3-202ENST00000421340 IREB2P48200 963 aaKnown RBP25.13■■□□□ 1.61
ABCF3-202ENST00000421340 CPLX2Q6PUV4 134 aaKnown RBP25.13■■□□□ 1.61
ABCF3-202ENST00000421340 USP17L5A8MUK1 530 aa25.12■■□□□ 1.61
ABCF3-202ENST00000421340 INPP5BP32019 993 aa25.12■■□□□ 1.61
ABCF3-202ENST00000421340 RTN1Q16799 776 aa25.12■■□□□ 1.61
ABCF3-202ENST00000421340 DLK2Q6UY11 383 aa25.12■■□□□ 1.61
ABCF3-202ENST00000421340 GMCL1P1Q8NEA9 526 aa25.12■■□□□ 1.61
ABCF3-202ENST00000421340 CTCFLQ8NI51 663 aaPredicted RBP25.12■■□□□ 1.61
ABCF3-202ENST00000421340 ZNF526Q8TF50 670 aaPredicted RBP25.12■■□□□ 1.61
ABCF3-202ENST00000421340 NUP133Q8WUM0 1156 aa25.12■■□□□ 1.61
ABCF3-202ENST00000421340 MYL10Q9BUA6 226 aa25.12■■□□□ 1.61
ABCF3-202ENST00000421340 SH2D4AQ9H788 454 aa25.12■■□□□ 1.61
ABCF3-202ENST00000421340 TMX2Q9Y320 296 aa25.12■■□□□ 1.61
ABCF3-202ENST00000421340 MYH8P13535 1937 aa25.12■■□□□ 1.61
ABCF3-202ENST00000421340 CPLX1O14810 134 aa25.11■■□□□ 1.61
ABCF3-202ENST00000421340 CDKL5O76039 1030 aa25.11■■□□□ 1.61
ABCF3-202ENST00000421340 SNHG28P0DPA3 235 aa25.11■■□□□ 1.61
ABCF3-202ENST00000421340 CDC27P30260 824 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms