RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 DISP2A7MBM2 1401 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 GUCY1A2P33402 732 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 NF2P35240 595 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 SSRP1Q08945 709 aaKnown RBP16.47■□□□□ 0.23
CHRD-204ENST00000420973 PICALMQ13492 652 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 KRT40Q6A162 431 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 PKD1L3Q7Z443 1732 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 TADA2BQ86TJ2 420 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 TRIM22Q8IYM9 498 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 ZNF274Q96GC6 653 aaPredicted RBP16.47■□□□□ 0.23
CHRD-204ENST00000420973 CLIC6Q96NY7 704 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 EPC1Q9H2F5 836 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 ZSCAN16Q9H4T2 348 aaPredicted RBP16.47■□□□□ 0.23
CHRD-204ENST00000420973 KIF28PB7ZC32 967 aa16.46■□□□□ 0.23
CHRD-204ENST00000420973 SNW1Q13573 536 aaKnown RBP16.46■□□□□ 0.23
CHRD-204ENST00000420973 LRRC4BQ9NT99 713 aa16.46■□□□□ 0.23
CHRD-204ENST00000420973 ARID5BQ14865 1188 aa16.46■□□□□ 0.23
CHRD-204ENST00000420973 SAFBQ15424 915 aaKnown RBP eCLIP16.46■□□□□ 0.23
CHRD-204ENST00000420973 NYXQ9GZU5 481 aa16.46■□□□□ 0.23
CHRD-204ENST00000420973 ZNF804BA4D1E1 1349 aa16.46■□□□□ 0.22
CHRD-204ENST00000420973 MECOMQ03112 1051 aa16.46■□□□□ 0.22
CHRD-204ENST00000420973 MAPKAPK5Q8IW41 473 aa16.46■□□□□ 0.22
CHRD-204ENST00000420973 N4BP2L2Q92802 583 aaPredicted RBP16.46■□□□□ 0.22
CHRD-204ENST00000420973 HPS5Q9UPZ3 1129 aa16.46■□□□□ 0.22
CHRD-204ENST00000420973 BTBD18B2RXH4 712 aa16.45■□□□□ 0.22
CHRD-204ENST00000420973 USP17L8P0C7I0 530 aa16.45■□□□□ 0.22
CHRD-204ENST00000420973 PTPN21Q16825 1174 aa16.45■□□□□ 0.22
CHRD-204ENST00000420973 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.45■□□□□ 0.22
CHRD-204ENST00000420973 DYNLL2Q96FJ2 89 aa16.45■□□□□ 0.22
CHRD-204ENST00000420973 PAIP2Q9BPZ3 127 aaKnown RBP16.45■□□□□ 0.22
CHRD-204ENST00000420973 NUCKS1Q9H1E3 243 aaKnown RBP16.45■□□□□ 0.22
CHRD-204ENST00000420973 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
CHRD-204ENST00000420973 VAT1LQ9HCJ6 419 aa16.45■□□□□ 0.22
CHRD-204ENST00000420973 IFIT1BQ5T764 474 aaKnown RBP16.45■□□□□ 0.22
CHRD-204ENST00000420973 ARFGAP3Q9NP61 516 aa16.45■□□□□ 0.22
CHRD-204ENST00000420973 VPS54Q9P1Q0 977 aa16.45■□□□□ 0.22
CHRD-204ENST00000420973 URI1O94763 535 aaPredicted RBP16.44■□□□□ 0.22
CHRD-204ENST00000420973 CORO7P57737 925 aa16.44■□□□□ 0.22
CHRD-204ENST00000420973 NR5A1Q13285 461 aa16.44■□□□□ 0.22
CHRD-204ENST00000420973 BSDC1Q9NW68 430 aaPredicted RBP16.44■□□□□ 0.22
CHRD-204ENST00000420973 TNKSO95271 1327 aa16.44■□□□□ 0.22
CHRD-204ENST00000420973 EIF6P56537 245 aaKnown RBP16.44■□□□□ 0.22
CHRD-204ENST00000420973 FBXW10Q5XX13 1052 aa16.44■□□□□ 0.22
CHRD-204ENST00000420973 EFCAB13Q8IY85 973 aa16.44■□□□□ 0.22
CHRD-204ENST00000420973 SLC44A5Q8NCS7 719 aa16.44■□□□□ 0.22
CHRD-204ENST00000420973 FAM200AQ8TCP9 573 aa16.44■□□□□ 0.22
CHRD-204ENST00000420973 GOLPH3LQ9H4A5 285 aa16.44■□□□□ 0.22
CHRD-204ENST00000420973 TOGARAM1Q9Y4F4 1720 aa16.44■□□□□ 0.22
CHRD-204ENST00000420973 SH2B2O14492 632 aaPredicted RBP16.44■□□□□ 0.22
CHRD-204ENST00000420973 SPTLC2O15270 562 aa16.44■□□□□ 0.22
CHRD-204ENST00000420973 REXO1L1PQ8IX06 675 aa16.44■□□□□ 0.22
CHRD-204ENST00000420973 TGFBRAP1Q8WUH2 860 aa16.44■□□□□ 0.22
CHRD-204ENST00000420973 PCDHA7Q9UN72 937 aa16.44■□□□□ 0.22
CHRD-204ENST00000420973 IQCA1Q86XH1 822 aa16.43■□□□□ 0.22
CHRD-204ENST00000420973 FAM177A1Q8N128 213 aaPredicted RBP16.43■□□□□ 0.22
CHRD-204ENST00000420973 ESR2Q92731 530 aa16.43■□□□□ 0.22
CHRD-204ENST00000420973 CPVLQ9H3G5 476 aa16.43■□□□□ 0.22
CHRD-204ENST00000420973 VEZTQ9HBM0 779 aa16.43■□□□□ 0.22
CHRD-204ENST00000420973 V9GY48 417 aaPredicted RBP16.43■□□□□ 0.22
CHRD-204ENST00000420973 KIF3CO14782 793 aa16.43■□□□□ 0.22
CHRD-204ENST00000420973 CLEC4GQ6UXB4 293 aa16.43■□□□□ 0.22
CHRD-204ENST00000420973 LLPHQ9BRT6 129 aaKnown RBP16.43■□□□□ 0.22
CHRD-204ENST00000420973 TACC3Q9Y6A5 838 aa16.43■□□□□ 0.22
CHRD-204ENST00000420973 TCRBV5S4A2TA0A5A2 114 aa16.43■□□□□ 0.22
CHRD-204ENST00000420973 PEX19P40855 299 aa16.43■□□□□ 0.22
CHRD-204ENST00000420973 ARMC3Q5W041 872 aa16.43■□□□□ 0.22
CHRD-204ENST00000420973 SMARCC2Q8TAQ2 1214 aa16.43■□□□□ 0.22
CHRD-204ENST00000420973 KRT23Q9C075 422 aa16.43■□□□□ 0.22
CHRD-204ENST00000420973 JCADQ9P266 1359 aa16.43■□□□□ 0.22
CHRD-204ENST00000420973 CDKL5O76039 1030 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 DOK7Q18PE1 504 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 MYSM1Q5VVJ2 828 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 LDHBP07195 334 aaKnown RBP16.42■□□□□ 0.22
CHRD-204ENST00000420973 NDUFA8P51970 172 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 PSMD2Q13200 908 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 UBE4AQ14139 1066 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 RASSF8Q8NHQ8 419 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 CCDC102AQ96A19 550 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 SERPINB2P05120 415 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 GRIK5Q16478 980 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 ZNF654Q8IZM8 581 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 CTCFLQ8NI51 663 aaPredicted RBP16.42■□□□□ 0.22
CHRD-204ENST00000420973 UIMC1Q96RL1 719 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 CENPHQ9H3R5 247 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 CBX8Q9HC52 389 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 CABP5Q9NP86 173 aa16.42■□□□□ 0.22
CHRD-204ENST00000420973 DDX19AQ9NUU7 478 aaKnown RBP16.42■□□□□ 0.22
CHRD-204ENST00000420973 IPO7O95373 1038 aaKnown RBP16.41■□□□□ 0.22
CHRD-204ENST00000420973 ZKSCAN8Q15776 578 aaPredicted RBP16.41■□□□□ 0.22
CHRD-204ENST00000420973 HSP90B2PQ58FF3 399 aa16.41■□□□□ 0.22
CHRD-204ENST00000420973 FMNL3Q8IVF7 1028 aa16.41■□□□□ 0.22
CHRD-204ENST00000420973 DIS3L2Q8IYB7 885 aaKnown RBP16.41■□□□□ 0.22
CHRD-204ENST00000420973 CRNKL1Q9BZJ0 848 aaKnown RBP16.41■□□□□ 0.22
CHRD-204ENST00000420973 LY9Q9HBG7 655 aa16.41■□□□□ 0.22
CHRD-204ENST00000420973 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
CHRD-204ENST00000420973 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.41■□□□□ 0.223e-6■■■□□ 14.6
CHRD-204ENST00000420973 IL17RAQ96F46 866 aa16.41■□□□□ 0.22
CHRD-204ENST00000420973 A0A087WUV0 522 aaPredicted RBP16.4■□□□□ 0.22
CHRD-204ENST00000420973 APBA3O96018 575 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 HNRNPH1P31943 449 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms