RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 ZNF215Q9UL58 517 aaPredicted RBP9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 ROBO3Q96MS0 1386 aa9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 SIPA1L1O43166 1804 aa9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 FAM205CA6NFA0 338 aa9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 TMEM232C9JQI7 657 aa9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 POLR2DO15514 142 aaKnown RBP9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 SLU7O95391 586 aaKnown RBP9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 BMP15O95972 392 aa9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 KRT2P35908 639 aa9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 PLCD1P51178 756 aa9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 FMR1Q06787 632 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 NAA30Q147X3 362 aaPredicted RBP9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 TMTC3Q6ZXV5 915 aa9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 CMTR1Q8N1G2 835 aaKnown RBP9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 LINC00116Q8NCU8 138 aa9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 NUP133Q8WUM0 1156 aa9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 FAM84BQ96KN1 310 aaPredicted RBP9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 MED15Q96RN5 788 aa9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 RAI14Q9P0K7 980 aa9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 MINPP1Q9UNW1 487 aa9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 IQSEC3Q9UPP2 1182 aaPredicted RBP9.99□□□□□ -0.81
TRIM49D1-201ENST00000420869 BRWD3Q6RI45 1802 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 TRIM75PA6NK02 468 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 MINDY4BA8MYZ0 360 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 SERPINC1P01008 464 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 XBP1P17861 261 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 ERCC5P28715 1186 aaPredicted RBP9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 DYNLL1P63167 89 aaKnown RBP9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 CFAP100Q494V2 611 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 EARS2Q5JPH6 523 aaKnown RBP9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 SPECC1Q5M775 1068 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 CTR9Q6PD62 1173 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 TRIM65Q6PJ69 517 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 USP49Q70CQ1 688 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 REXO1L1PQ8IX06 675 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 ZNF397Q8NF99 534 aaPredicted RBP9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 ZNF592Q92610 1267 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 SMARCE1Q969G3 411 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 FERMT2Q96AC1 680 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 NSUN4Q96CB9 384 aaKnown RBP9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 CSRNP2Q9H175 543 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 ABCF2Q9UG63 623 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 NRXN2Q9P2S2 1712 aa9.98□□□□□ -0.81
TRIM49D1-201ENST00000420869 A0A087X0B3 334 aa9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 WTIPA6NIX2 430 aaPredicted RBP9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 IGSF3O75054 1194 aa9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 PLEKHA8P1O95397 391 aa9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 TOP1P11387 765 aaKnown RBP9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 NT5C2P49902 561 aa9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 ETF1P62495 437 aaKnown RBP9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 SBK1Q52WX2 424 aa9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 CAVIN4Q5BKX8 364 aa9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 IFIT1BQ5T764 474 aaKnown RBP9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 APTXQ7Z2E3 356 aaKnown RBP9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 CATIPQ7Z7H3 387 aa9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 CELF1Q92879 486 aaKnown RBP9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 CABP5Q9NP86 173 aa9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 FAM53CQ9NYF3 392 aa9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 VPS54Q9P1Q0 977 aa9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 DDX41Q9UJV9 622 aaKnown RBP9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 NFE2L3Q9Y4A8 694 aa9.97□□□□□ -0.81
TRIM49D1-201ENST00000420869 CYP2D7A0A087X1C5 515 aa9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 A0A1B0GTH6 734 aa9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 WNT7AO00755 349 aa9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 ARHGAP6O43182 974 aa9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 ATP2C1P98194 919 aaPredicted RBP9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 CUL4BQ13620 913 aa9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 UTP14CQ5TAP6 766 aaKnown RBP9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 SYT10Q6XYQ8 523 aa9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 IQCA1Q86XH1 822 aa9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 NUTM2AQ8IVF1 878 aaPredicted RBP9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 TC2NQ8N9U0 490 aa9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 ARID3AQ99856 593 aa9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 ZMYND15Q9H091 742 aa9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 OGFRQ9NZT2 677 aa9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 PSME4Q14997 1843 aa9.96□□□□□ -0.81
TRIM49D1-201ENST00000420869 FANCGO15287 622 aa9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 ADAMTS2O95450 1211 aa9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 SLFN14P0C7P3 912 aa9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 ZSCAN20P17040 1043 aaPredicted RBP9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 PBX1P40424 430 aa9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 AKAP17AQ02040 695 aaKnown RBP9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 MECOMQ03112 1051 aa9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 DPYDQ12882 1025 aa9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 CDKAL1Q5VV42 579 aa9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 GRAMD1CQ8IYS0 662 aa9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 CCDC82Q8N4S0 544 aa9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 DCP1AQ9NPI6 582 aaPredicted RBP9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 ATP8A2Q9NTI2 1148 aa9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 ARPP21Q9UBL0 812 aaPredicted RBP9.96□□□□□ -0.82
TRIM49D1-201ENST00000420869 SYNRGQ9UMZ2 1314 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 LOXHD1Q8IVV2 1947 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 KCNQ2O43526 872 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 STX10O60499 249 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 PRDM1O75626 825 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 H2AFXP16104 143 aaPredicted RBP9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 KLRK1P26718 216 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 TRAPPC10P48553 1259 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 DMTNQ08495 405 aa9.95□□□□□ -0.82
TRIM49D1-201ENST00000420869 NR1I3Q14994 352 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms