RNA–Protein interactions for RNA: ENST00000420410.5

LPP-204, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-204ENST00000420410 CLEC10AQ8IUN9 316 aa22.85■■□□□ 1.25
LPP-204ENST00000420410 SMCR8Q8TEV9 937 aaPredicted RBP22.85■■□□□ 1.25
LPP-204ENST00000420410 CCDC17Q96LX7 622 aa22.85■■□□□ 1.25
LPP-204ENST00000420410 EMILIN3Q9NT22 766 aa22.85■■□□□ 1.25
LPP-204ENST00000420410 TRIM17Q9Y577 477 aa22.85■■□□□ 1.25
LPP-204ENST00000420410 LOC285556D6RIA3 1793 aa22.85■■□□□ 1.25
LPP-204ENST00000420410 ZNF589Q86UQ0 364 aaPredicted RBP22.84■■□□□ 1.25
LPP-204ENST00000420410 MKNK2Q9HBH9 465 aa22.84■■□□□ 1.25
LPP-204ENST00000420410 DIAPH3Q9NSV4 1193 aa22.84■■□□□ 1.25
LPP-204ENST00000420410 PNMA3Q9UL41 463 aa22.84■■□□□ 1.25
LPP-204ENST00000420410 MYH8P13535 1937 aa22.84■■□□□ 1.25
LPP-204ENST00000420410 NEFLP07196 543 aa22.83■■□□□ 1.25
LPP-204ENST00000420410 PABPC4Q13310 644 aaKnown RBP eCLIP22.83■■□□□ 1.25
LPP-204ENST00000420410 IFFO2Q5TF58 517 aa22.83■■□□□ 1.25
LPP-204ENST00000420410 CWC27Q6UX04 472 aaKnown RBP22.83■■□□□ 1.25
LPP-204ENST00000420410 OTOP1Q7RTM1 612 aa22.83■■□□□ 1.25
LPP-204ENST00000420410 ARHGAP39Q9C0H5 1083 aa22.83■■□□□ 1.25
LPP-204ENST00000420410 ROBO3Q96MS0 1386 aa22.83■■□□□ 1.25
LPP-204ENST00000420410 PRDM1O75626 825 aa22.82■■□□□ 1.24
LPP-204ENST00000420410 OSBPP22059 807 aa22.82■■□□□ 1.24
LPP-204ENST00000420410 LACTBP83111 547 aaPredicted RBP22.82■■□□□ 1.24
LPP-204ENST00000420410 CENPQQ7L2Z9 268 aaPredicted RBP22.82■■□□□ 1.24
LPP-204ENST00000420410 KIAA1683Q9H0B3 1180 aa22.82■■□□□ 1.24
LPP-204ENST00000420410 ASCC2Q9H1I8 757 aaPredicted RBP22.82■■□□□ 1.24
LPP-204ENST00000420410 EFCC1Q9HA90 598 aa22.82■■□□□ 1.24
LPP-204ENST00000420410 CCDC171Q6TFL3 1326 aa22.82■■□□□ 1.24
LPP-204ENST00000420410 A0A1W2PRG0 241 aa22.81■■□□□ 1.24
LPP-204ENST00000420410 RASA1P20936 1047 aa22.81■■□□□ 1.24
LPP-204ENST00000420410 IRX3P78415 501 aaPredicted RBP22.81■■□□□ 1.24
LPP-204ENST00000420410 ICA1Q05084 483 aa22.81■■□□□ 1.24
LPP-204ENST00000420410 PPARAQ07869 468 aa22.81■■□□□ 1.24
LPP-204ENST00000420410 KIF22Q14807 665 aa22.81■■□□□ 1.24
LPP-204ENST00000420410 PKN2Q16513 984 aaKnown RBP22.81■■□□□ 1.24
LPP-204ENST00000420410 HIP1O00291 1037 aa22.8■■□□□ 1.24
LPP-204ENST00000420410 HSPD1P10809 573 aaKnown RBP22.8■■□□□ 1.24
LPP-204ENST00000420410 BCRP11274 1271 aa22.8■■□□□ 1.24
LPP-204ENST00000420410 USP14P54578 494 aa22.8■■□□□ 1.24
LPP-204ENST00000420410 ATP2B2Q01814 1243 aa22.8■■□□□ 1.24
LPP-204ENST00000420410 ANKRD13CQ8N6S4 541 aa22.8■■□□□ 1.24
LPP-204ENST00000420410 SLC3A2P08195 630 aaKnown RBP22.79■■□□□ 1.24
LPP-204ENST00000420410 CTDSPL2Q05D32 466 aa22.79■■□□□ 1.24
LPP-204ENST00000420410 FBXO46Q6PJ61 603 aaPredicted RBP22.79■■□□□ 1.24
LPP-204ENST00000420410 SKAP1Q86WV1 359 aa22.79■■□□□ 1.24
LPP-204ENST00000420410 SIAH1Q8IUQ4 282 aa22.79■■□□□ 1.24
LPP-204ENST00000420410 CCDC136Q96JN2 1154 aa22.79■■□□□ 1.24
LPP-204ENST00000420410 C12orf42Q96LP6 360 aa22.79■■□□□ 1.24
LPP-204ENST00000420410 ZNF287Q9HBT7 754 aa22.79■■□□□ 1.24
LPP-204ENST00000420410 ARHGEF10LQ9HCE6 1279 aa22.79■■□□□ 1.24
LPP-204ENST00000420410 CENPBP07199 599 aaPredicted RBP22.78■■□□□ 1.24
LPP-204ENST00000420410 VCAM1P19320 739 aa22.78■■□□□ 1.24
LPP-204ENST00000420410 HOXA7P31268 230 aaPredicted RBP22.78■■□□□ 1.24
LPP-204ENST00000420410 MFAP1P55081 439 aaKnown RBP22.78■■□□□ 1.24
LPP-204ENST00000420410 PDE4BQ07343 736 aa22.78■■□□□ 1.24
LPP-204ENST00000420410 ARHGEF6Q15052 776 aa22.78■■□□□ 1.24
LPP-204ENST00000420410 ALX1Q15699 326 aa22.78■■□□□ 1.24
LPP-204ENST00000420410 ZNF444Q8N0Y2 327 aaPredicted RBP22.78■■□□□ 1.24
LPP-204ENST00000420410 P2RX7Q99572 595 aaKnown RBP22.78■■□□□ 1.24
LPP-204ENST00000420410 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.78■■□□□ 1.24
LPP-204ENST00000420410 KANSL2Q9H9L4 492 aa22.78■■□□□ 1.24
LPP-204ENST00000420410 ZSWIM8A7E2V4 1837 aa22.78■■□□□ 1.24
LPP-204ENST00000420410 CCDC85CA6NKD9 419 aa22.77■■□□□ 1.24
LPP-204ENST00000420410 FGAP02671 866 aa22.77■■□□□ 1.24
LPP-204ENST00000420410 EEF2P13639 858 aaKnown RBP22.77■■□□□ 1.24
LPP-204ENST00000420410 CTGFP29279 349 aa22.77■■□□□ 1.24
LPP-204ENST00000420410 PSMC4P43686 418 aa22.77■■□□□ 1.24
LPP-204ENST00000420410 HPS5Q9UPZ3 1129 aa22.77■■□□□ 1.24
LPP-204ENST00000420410 FMNL1O95466 1100 aaPredicted RBP22.76■■□□□ 1.23
LPP-204ENST00000420410 GCLCP48506 637 aaPredicted RBP22.76■■□□□ 1.23
LPP-204ENST00000420410 TRIM47Q96LD4 638 aa22.76■■□□□ 1.23
LPP-204ENST00000420410 RPAP3Q9H6T3 665 aaPredicted RBP22.76■■□□□ 1.23
LPP-204ENST00000420410 INCENPQ9NQS7 918 aa22.76■■□□□ 1.23
LPP-204ENST00000420410 PTPN22Q9Y2R2 807 aa22.76■■□□□ 1.23
LPP-204ENST00000420410 USP17L15C9J2P7 530 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 USP17L13C9JLJ4 530 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 USP17L11C9JVI0 530 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 USP17L18D6R9N7 530 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 USP17L22D6RA61 530 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 USP17L17D6RBQ6 530 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 USP17L19D6RCP7 530 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 USP17L20D6RJB6 530 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 PEX10O60683 326 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 HERVK_113P62684 666 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 USP17L24Q0WX57 530 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 FAM47AQ5JRC9 791 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 KIAA1755Q5JYT7 1200 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 SPICE1Q8N0Z3 855 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 SH2D4AQ9H788 454 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 TMX2Q9Y320 296 aa22.75■■□□□ 1.23
LPP-204ENST00000420410 HAND2P61296 217 aa22.74■■□□□ 1.23
LPP-204ENST00000420410 FAM110CQ1W6H9 321 aa22.74■■□□□ 1.23
LPP-204ENST00000420410 ANAPC4Q9UJX5 808 aa22.74■■□□□ 1.23
LPP-204ENST00000420410 RAD21O60216 631 aa22.73■■□□□ 1.23
LPP-204ENST00000420410 TSPY3P0CV98 308 aa22.73■■□□□ 1.23
LPP-204ENST00000420410 TSPY8P0CW00 308 aa22.73■■□□□ 1.23
LPP-204ENST00000420410 FCGRTP55899 365 aa22.73■■□□□ 1.23
LPP-204ENST00000420410 TFAP4Q01664 338 aa22.73■■□□□ 1.23
LPP-204ENST00000420410 CATSPERGQ6ZRH7 1159 aa22.73■■□□□ 1.23
LPP-204ENST00000420410 IL25Q9H293 177 aa22.73■■□□□ 1.23
LPP-204ENST00000420410 VCPKMTQ9H867 229 aa22.73■■□□□ 1.23
LPP-204ENST00000420410 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 254.9 ms