RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 USP17L22D6RA61 530 aa24.63■■□□□ 1.53
MCF2L-212ENST00000420013 USP17L17D6RBQ6 530 aa24.63■■□□□ 1.53
MCF2L-212ENST00000420013 USP17L19D6RCP7 530 aa24.63■■□□□ 1.53
MCF2L-212ENST00000420013 USP17L20D6RJB6 530 aa24.63■■□□□ 1.53
MCF2L-212ENST00000420013 ADD2P35612 726 aa24.63■■□□□ 1.53
MCF2L-212ENST00000420013 USP17L24Q0WX57 530 aa24.63■■□□□ 1.53
MCF2L-212ENST00000420013 TRMT44Q8IYL2 757 aaKnown RBP24.63■■□□□ 1.53
MCF2L-212ENST00000420013 LCORLQ8N3X6 602 aa24.63■■□□□ 1.53
MCF2L-212ENST00000420013 HAUS7Q99871 368 aa24.63■■□□□ 1.53
MCF2L-212ENST00000420013 TXNRD2Q9NNW7 524 aa24.63■■□□□ 1.53
MCF2L-212ENST00000420013 DCP1AQ9NPI6 582 aaPredicted RBP24.63■■□□□ 1.53
MCF2L-212ENST00000420013 XRCC5P13010 732 aaKnown RBP24.62■■□□□ 1.53
MCF2L-212ENST00000420013 DEFB118Q96PH6 123 aa24.62■■□□□ 1.53
MCF2L-212ENST00000420013 NUDT12Q9BQG2 462 aa24.62■■□□□ 1.53
MCF2L-212ENST00000420013 CRISPLD2Q9H0B8 497 aa24.62■■□□□ 1.53
MCF2L-212ENST00000420013 BOLA2Q9H3K6 86 aa24.62■■□□□ 1.53
MCF2L-212ENST00000420013 SWAP70Q9UH65 585 aa24.62■■□□□ 1.53
MCF2L-212ENST00000420013 ZNF236Q9UL36 1845 aa24.62■■□□□ 1.53
MCF2L-212ENST00000420013 VCAM1P19320 739 aa24.61■■□□□ 1.53
MCF2L-212ENST00000420013 LBX2Q6XYB7 198 aa24.61■■□□□ 1.53
MCF2L-212ENST00000420013 SDR42E1Q8WUS8 393 aa24.61■■□□□ 1.53
MCF2L-212ENST00000420013 ATP8A2Q9NTI2 1148 aa24.61■■□□□ 1.53
MCF2L-212ENST00000420013 RBPJLQ9UBG7 517 aa24.61■■□□□ 1.53
MCF2L-212ENST00000420013 RABGAP1Q9Y3P9 1069 aa24.61■■□□□ 1.53
MCF2L-212ENST00000420013 ALPK3Q96L96 1907 aa24.61■■□□□ 1.53
MCF2L-212ENST00000420013 RPTORQ8N122 1335 aa24.61■■□□□ 1.53
MCF2L-212ENST00000420013 ZYXQ15942 572 aaKnown RBP24.6■■□□□ 1.53
MCF2L-212ENST00000420013 CCAR1Q8IX12 1150 aaKnown RBP24.6■■□□□ 1.53
MCF2L-212ENST00000420013 ANKLE1Q8NAG6 615 aa24.6■■□□□ 1.53
MCF2L-212ENST00000420013 EDC3Q96F86 508 aaKnown RBP24.6■■□□□ 1.53
MCF2L-212ENST00000420013 PAGR1Q9BTK6 254 aa24.6■■□□□ 1.53
MCF2L-212ENST00000420013 FRMPD3Q5JV73 1810 aa24.6■■□□□ 1.53
MCF2L-212ENST00000420013 PARP14Q460N5 1801 aa24.59■■□□□ 1.53
MCF2L-212ENST00000420013 H0YGN5 161 aa24.59■■□□□ 1.53
MCF2L-212ENST00000420013 CCNA1P78396 465 aa24.59■■□□□ 1.53
MCF2L-212ENST00000420013 UBE3CQ15386 1083 aa24.59■■□□□ 1.53
MCF2L-212ENST00000420013 ZSCAN25Q6NSZ9 544 aa24.59■■□□□ 1.53
MCF2L-212ENST00000420013 AMOTL1Q8IY63 956 aa24.59■■□□□ 1.53
MCF2L-212ENST00000420013 DPF3Q92784 378 aa24.59■■□□□ 1.53
MCF2L-212ENST00000420013 HMX1Q9NP08 348 aaPredicted RBP24.59■■□□□ 1.53
MCF2L-212ENST00000420013 MBD4O95243 580 aa24.58■■□□□ 1.53
MCF2L-212ENST00000420013 TFRCP02786 760 aaKnown RBP24.58■■□□□ 1.53
MCF2L-212ENST00000420013 GUCY1A2P33402 732 aa24.58■■□□□ 1.53
MCF2L-212ENST00000420013 C20orf194Q5TEA3 1177 aa24.58■■□□□ 1.53
MCF2L-212ENST00000420013 CATSPERGQ6ZRH7 1159 aa24.58■■□□□ 1.53
MCF2L-212ENST00000420013 TMEM179Q6ZVK1 233 aa24.58■■□□□ 1.53
MCF2L-212ENST00000420013 ACER1Q8TDN7 264 aa24.58■■□□□ 1.53
MCF2L-212ENST00000420013 TRIB2Q92519 343 aa24.58■■□□□ 1.53
MCF2L-212ENST00000420013 DDRGK1Q96HY6 314 aa24.58■■□□□ 1.53
MCF2L-212ENST00000420013 APBA2Q99767 749 aa24.58■■□□□ 1.53
MCF2L-212ENST00000420013 ARMT1Q9H993 441 aa24.58■■□□□ 1.53
MCF2L-212ENST00000420013 NR2E3Q9Y5X4 410 aa24.58■■□□□ 1.53
MCF2L-212ENST00000420013 RLFQ13129 1914 aa24.58■■□□□ 1.53
MCF2L-212ENST00000420013 GLRX3O76003 335 aaKnown RBP24.57■■□□□ 1.52
MCF2L-212ENST00000420013 ZKSCAN1P17029 563 aaPredicted RBP24.57■■□□□ 1.52
MCF2L-212ENST00000420013 RGS2P41220 211 aa24.57■■□□□ 1.52
MCF2L-212ENST00000420013 SEPT2Q15019 361 aa24.57■■□□□ 1.52
MCF2L-212ENST00000420013 MAP3K21Q5TCX8 1036 aa24.57■■□□□ 1.52
MCF2L-212ENST00000420013 GPR142Q7Z601 462 aa24.57■■□□□ 1.52
MCF2L-212ENST00000420013 BCL11AQ9H165 835 aa24.57■■□□□ 1.52
MCF2L-212ENST00000420013 PORCNQ9H237 461 aa24.57■■□□□ 1.52
MCF2L-212ENST00000420013 TRIOBPQ9H2D6 2365 aa24.56■■□□□ 1.52
MCF2L-212ENST00000420013 PLEKHH3Q7Z736 793 aa24.56■■□□□ 1.52
MCF2L-212ENST00000420013 USP6NLQ92738 828 aa24.56■■□□□ 1.52
MCF2L-212ENST00000420013 GPATCH3Q96I76 525 aa24.56■■□□□ 1.52
MCF2L-212ENST00000420013 CWC22Q9HCG8 908 aaKnown RBP24.56■■□□□ 1.52
MCF2L-212ENST00000420013 GREB1LQ9C091 1923 aaPredicted RBP24.55■■□□□ 1.52
MCF2L-212ENST00000420013 MPHOSPH10O00566 681 aaKnown RBP24.55■■□□□ 1.52
MCF2L-212ENST00000420013 CYP2B6P20813 491 aa24.55■■□□□ 1.52
MCF2L-212ENST00000420013 MORN1Q5T089 497 aa24.55■■□□□ 1.52
MCF2L-212ENST00000420013 RPAP3Q9H6T3 665 aaPredicted RBP24.55■■□□□ 1.52
MCF2L-212ENST00000420013 SH2D4AQ9H788 454 aa24.55■■□□□ 1.52
MCF2L-212ENST00000420013 COLQQ9Y215 455 aaPredicted RBP24.55■■□□□ 1.52
MCF2L-212ENST00000420013 SPDYE16A6NNV3 312 aaPredicted RBP24.54■■□□□ 1.52
MCF2L-212ENST00000420013 CNMDO75829 334 aa24.54■■□□□ 1.52
MCF2L-212ENST00000420013 Q3C1V9 767 aa24.54■■□□□ 1.52
MCF2L-212ENST00000420013 NECAB2Q7Z6G3 386 aa24.54■■□□□ 1.52
MCF2L-212ENST00000420013 LPAR1Q92633 364 aa24.54■■□□□ 1.52
MCF2L-212ENST00000420013 CCDC17Q96LX7 622 aa24.54■■□□□ 1.52
MCF2L-212ENST00000420013 ECHDC1Q9NTX5 307 aa24.54■■□□□ 1.52
MCF2L-212ENST00000420013 PEX10O60683 326 aa24.53■■□□□ 1.52
MCF2L-212ENST00000420013 PRKAR2AP13861 404 aaKnown RBP24.53■■□□□ 1.52
MCF2L-212ENST00000420013 POTEEQ6S8J3 1075 aa24.53■■□□□ 1.52
MCF2L-212ENST00000420013 ARHGEF10LQ9HCE6 1279 aa24.53■■□□□ 1.52
MCF2L-212ENST00000420013 CYP2D6P10635 497 aa24.52■■□□□ 1.52
MCF2L-212ENST00000420013 EVX2Q03828 476 aa24.52■■□□□ 1.52
MCF2L-212ENST00000420013 TRIM32Q13049 653 aa24.52■■□□□ 1.52
MCF2L-212ENST00000420013 MAP2K5Q13163 448 aa24.52■■□□□ 1.52
MCF2L-212ENST00000420013 C12orf60Q5U649 245 aa24.52■■□□□ 1.52
MCF2L-212ENST00000420013 SLC44A5Q8NCS7 719 aa24.52■■□□□ 1.52
MCF2L-212ENST00000420013 ARPP21Q9UBL0 812 aaPredicted RBP24.52■■□□□ 1.52
MCF2L-212ENST00000420013 PRKAB2O43741 272 aa24.51■■□□□ 1.51
MCF2L-212ENST00000420013 FXR1P51114 621 aaKnown RBP eCLIP24.51■■□□□ 1.51
MCF2L-212ENST00000420013 ICA1Q05084 483 aa24.51■■□□□ 1.51
MCF2L-212ENST00000420013 C16orf86Q6ZW13 317 aa24.51■■□□□ 1.51
MCF2L-212ENST00000420013 DCTPP1Q9H773 170 aa24.51■■□□□ 1.51
MCF2L-212ENST00000420013 OGDHLQ9ULD0 1010 aa24.51■■□□□ 1.51
MCF2L-212ENST00000420013 IVNS1ABPQ9Y6Y0 642 aa24.51■■□□□ 1.51
MCF2L-212ENST00000420013 A0A1W2PRG0 241 aa24.5■■□□□ 1.51
MCF2L-212ENST00000420013 SLC15A5A6NIM6 579 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms