RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 NLRP12P59046 1061 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 TUBB2AQ13885 445 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 E4F1Q66K89 784 aaPredicted RBP8.08□□□□□ -1.12
TVP23C-202ENST00000419890 FAM173BQ6P4H8 233 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 DHX32Q7L7V1 743 aaKnown RBP8.08□□□□□ -1.12
TVP23C-202ENST00000419890 AOPEPQ8N6M6 819 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 FSIP1Q8NA03 581 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 PIGBQ92521 554 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 EAF2Q96CJ1 260 aaPredicted RBP8.08□□□□□ -1.12
TVP23C-202ENST00000419890 TUBB2BQ9BVA1 445 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 TMX1Q9H3N1 280 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 ZBTB3Q9H5J0 574 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 HELLSQ9NRZ9 838 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 TMEM51Q9NW97 253 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 TMOD3Q9NYL9 352 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.08□□□□□ -1.12
TVP23C-202ENST00000419890 TFIP11Q9UBB9 837 aaKnown RBP8.08□□□□□ -1.12
TVP23C-202ENST00000419890 MAP4K5Q9Y4K4 846 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 FHOD1Q9Y613 1164 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 ZNF609O15014 1411 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 ABCC12Q96J65 1359 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 RREB1Q92766 1687 aa8.08□□□□□ -1.12
TVP23C-202ENST00000419890 C4AP0C0L4 1744 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 C4BP0C0L5 1744 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 NUP188Q5SRE5 1749 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 PKD1L3Q7Z443 1732 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 DOT1LQ8TEK3 1739 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 PTPDC1A2A3K4 754 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 JAK2O60674 1132 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 TADA3O75528 432 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 FSHRP23945 695 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 GTF2E1P29083 439 aaPredicted RBP8.07□□□□□ -1.12
TVP23C-202ENST00000419890 EXOSC10Q01780 885 aaKnown RBP8.07□□□□□ -1.12
TVP23C-202ENST00000419890 PTSQ03393 145 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 TEFQ10587 303 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 SCRN1Q12765 414 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 AGERQ15109 404 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 SLC15A2Q16348 729 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 LRRFIP1Q32MZ4 808 aaKnown RBP8.07□□□□□ -1.12
TVP23C-202ENST00000419890 RABL6Q3YEC7 729 aaPredicted RBP8.07□□□□□ -1.12
TVP23C-202ENST00000419890 MCMDC2Q4G0Z9 681 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 SLC27A3Q5K4L6 730 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 RNFT1Q5M7Z0 435 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 PRPF38BQ5VTL8 546 aaKnown RBP8.07□□□□□ -1.12
TVP23C-202ENST00000419890 ZNF385CQ66K41 422 aaPredicted RBP8.07□□□□□ -1.12
TVP23C-202ENST00000419890 Q6ZUG5 572 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 IQUBQ8NA54 791 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 NANOS1Q8WY41 292 aaKnown RBP8.07□□□□□ -1.12
TVP23C-202ENST00000419890 UBXN4Q92575 508 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 ZNF592Q92610 1267 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 DDX11Q96FC9 970 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 TSEN34Q9BSV6 310 aaKnown RBP8.07□□□□□ -1.12
TVP23C-202ENST00000419890 GOLPH3LQ9H4A5 285 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 GPR108Q9NPR9 543 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 DDX21Q9NR30 783 aaKnown RBP eCLIP8.07□□□□□ -1.12
TVP23C-202ENST00000419890 LRRC4BQ9NT99 713 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 ZNF446Q9NWS9 450 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 CWC15Q9P013 229 aaKnown RBP8.07□□□□□ -1.12
TVP23C-202ENST00000419890 ORC3Q9UBD5 711 aaPredicted RBP8.07□□□□□ -1.12
TVP23C-202ENST00000419890 CCNL1Q9UK58 526 aaPredicted RBP8.07□□□□□ -1.12
TVP23C-202ENST00000419890 MAP3K2Q9Y2U5 619 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 USP16Q9Y5T5 823 aa8.07□□□□□ -1.12
TVP23C-202ENST00000419890 NEDD4P46934 1319 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 BTBD11A6QL63 1104 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 ERVV-2B6SEH9 535 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 ARHGAP6O43182 974 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 DHX16O60231 1041 aaKnown RBP8.06□□□□□ -1.12
TVP23C-202ENST00000419890 ZMYND10O75800 440 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 TUBBP07437 444 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 HSP90B1P14625 803 aaKnown RBP8.06□□□□□ -1.12
TVP23C-202ENST00000419890 CABP4P57796 275 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.06□□□□□ -1.12
TVP23C-202ENST00000419890 CTR9Q6PD62 1173 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 ZNF589Q86UQ0 364 aaPredicted RBP8.06□□□□□ -1.12
TVP23C-202ENST00000419890 TRMT44Q8IYL2 757 aaKnown RBP8.06□□□□□ -1.12
TVP23C-202ENST00000419890 MNS1Q8NEH6 495 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.06□□□□□ -1.12
TVP23C-202ENST00000419890 SMARCC1Q92922 1105 aaPredicted RBP8.06□□□□□ -1.12
TVP23C-202ENST00000419890 SUCLG2Q96I99 432 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 DCAF5Q96JK2 942 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 USP28Q96RU2 1077 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 HAUS7Q99871 368 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 COL25A1Q9BXS0 654 aaPredicted RBP8.06□□□□□ -1.12
TVP23C-202ENST00000419890 BICC1Q9H694 974 aaKnown RBP8.06□□□□□ -1.12
TVP23C-202ENST00000419890 TUBE1Q9UJT0 475 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 CHMP3Q9Y3E7 222 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 RGPD3A6NKT7 1758 aaPredicted RBP8.06□□□□□ -1.12
TVP23C-202ENST00000419890 RGPD4Q7Z3J3 1758 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 ITGB4P16144 1822 aa8.06□□□□□ -1.12
TVP23C-202ENST00000419890 TTLL8A6PVC2 850 aa8.05□□□□□ -1.12
TVP23C-202ENST00000419890 RNMTO43148 476 aaKnown RBP8.05□□□□□ -1.12
TVP23C-202ENST00000419890 CYP21A2P08686 494 aa8.05□□□□□ -1.12
TVP23C-202ENST00000419890 EIF2S2P20042 333 aaKnown RBP8.05□□□□□ -1.12
TVP23C-202ENST00000419890 CMA1P23946 247 aa8.05□□□□□ -1.12
TVP23C-202ENST00000419890 PLA2G4AP47712 749 aa8.05□□□□□ -1.12
TVP23C-202ENST00000419890 NEXNQ0ZGT2 675 aa8.05□□□□□ -1.12
TVP23C-202ENST00000419890 NAA30Q147X3 362 aaPredicted RBP8.05□□□□□ -1.12
TVP23C-202ENST00000419890 DIXDC1Q155Q3 683 aa8.05□□□□□ -1.12
TVP23C-202ENST00000419890 ARHGAP29Q52LW3 1261 aa8.05□□□□□ -1.12
TVP23C-202ENST00000419890 CT47A1Q5JQC4 288 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms