RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 DDAH1O94760 285 aa16.11■□□□□ 0.17
CHMP5-202ENST00000419016 BRD1O95696 1058 aa16.11■□□□□ 0.17
CHMP5-202ENST00000419016 FDPSP14324 419 aaKnown RBP16.11■□□□□ 0.17
CHMP5-202ENST00000419016 SYT1P21579 422 aa16.11■□□□□ 0.17
CHMP5-202ENST00000419016 TNFAIP1Q13829 316 aa16.11■□□□□ 0.17
CHMP5-202ENST00000419016 PPP2R5BQ15173 497 aa16.11■□□□□ 0.17
CHMP5-202ENST00000419016 CATIPQ7Z7H3 387 aa16.11■□□□□ 0.17
CHMP5-202ENST00000419016 TMEM47Q9BQJ4 181 aa16.11■□□□□ 0.17
CHMP5-202ENST00000419016 TNNI2P48788 182 aa16.11■□□□□ 0.17
CHMP5-202ENST00000419016 HMGN5P82970 282 aaKnown RBP16.11■□□□□ 0.17
CHMP5-202ENST00000419016 RRP1BQ14684 758 aaKnown RBP16.11■□□□□ 0.17
CHMP5-202ENST00000419016 CERKLQ49MI3 558 aaPredicted RBP16.11■□□□□ 0.17
CHMP5-202ENST00000419016 MAP3K14Q99558 947 aa16.11■□□□□ 0.17
CHMP5-202ENST00000419016 CALM1P0DP23 149 aa16.1■□□□□ 0.17
CHMP5-202ENST00000419016 CALM2P0DP24 149 aa16.1■□□□□ 0.17
CHMP5-202ENST00000419016 CALM3P0DP25 149 aa16.1■□□□□ 0.17
CHMP5-202ENST00000419016 RTN1Q16799 776 aa16.1■□□□□ 0.17
CHMP5-202ENST00000419016 CCDC144CPQ8IYA2 1237 aa16.1■□□□□ 0.17
CHMP5-202ENST00000419016 IFNAR1P17181 557 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 JAG1P78504 1218 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 FUT2Q10981 343 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 PNMA1Q8ND90 353 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 DEFB129Q9H1M3 183 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 KAT14Q9H8E8 782 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 ADARB2Q9NS39 739 aaKnown RBP16.09■□□□□ 0.17
CHMP5-202ENST00000419016 SCAF8Q9UPN6 1271 aaKnown RBP16.09■□□□□ 0.17
CHMP5-202ENST00000419016 CCDC196A0A1B0GTZ2 297 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 CPLX1O14810 134 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 TOP1P11387 765 aaKnown RBP16.09■□□□□ 0.17
CHMP5-202ENST00000419016 PDIA4P13667 645 aaKnown RBP16.09■□□□□ 0.17
CHMP5-202ENST00000419016 GUCY1A2P33402 732 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 SHROOM1Q2M3G4 852 aaPredicted RBP16.09■□□□□ 0.17
CHMP5-202ENST00000419016 DPY19L2Q6NUT2 758 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 NUP133Q8WUM0 1156 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 TNPO1Q92973 898 aaKnown RBP16.09■□□□□ 0.17
CHMP5-202ENST00000419016 DDX11Q96FC9 970 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.09■□□□□ 0.17
CHMP5-202ENST00000419016 STX8Q9UNK0 236 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 MYH8P13535 1937 aa16.09■□□□□ 0.17
CHMP5-202ENST00000419016 STX6O43752 255 aa16.08■□□□□ 0.16
CHMP5-202ENST00000419016 PDCP20941 246 aa16.08■□□□□ 0.16
CHMP5-202ENST00000419016 ANGEL2Q5VTE6 544 aaKnown RBP16.08■□□□□ 0.16
CHMP5-202ENST00000419016 CLEC17AQ6ZS10 378 aa16.08■□□□□ 0.16
CHMP5-202ENST00000419016 NBPF11Q86T75 865 aa16.08■□□□□ 0.16
CHMP5-202ENST00000419016 SIAH1Q8IUQ4 282 aa16.08■□□□□ 0.16
CHMP5-202ENST00000419016 APOBEC3FQ8IUX4 373 aaKnown RBP16.08■□□□□ 0.16
CHMP5-202ENST00000419016 TRIM34Q9BYJ4 488 aa16.08■□□□□ 0.16
CHMP5-202ENST00000419016 MTMR6Q9Y217 621 aa16.08■□□□□ 0.16
CHMP5-202ENST00000419016 GLTPD2A6NH11 291 aa16.07■□□□□ 0.16
CHMP5-202ENST00000419016 CDKL5O76039 1030 aa16.07■□□□□ 0.16
CHMP5-202ENST00000419016 LMOD1P29536 600 aaPredicted RBP16.07■□□□□ 0.16
CHMP5-202ENST00000419016 LARP1BQ659C4 914 aaKnown RBP16.07■□□□□ 0.16
CHMP5-202ENST00000419016 RBM28Q9NW13 759 aaKnown RBP16.07■□□□□ 0.16
CHMP5-202ENST00000419016 PITPNM2Q9BZ72 1349 aa16.07■□□□□ 0.16
CHMP5-202ENST00000419016 WDR33Q9C0J8 1336 aaKnown RBP16.07■□□□□ 0.16
CHMP5-202ENST00000419016 TTLL1O95922 423 aa16.07■□□□□ 0.16
CHMP5-202ENST00000419016 ABCB5Q2M3G0 1257 aa16.07■□□□□ 0.16
CHMP5-202ENST00000419016 CPLX2Q6PUV4 134 aaKnown RBP16.07■□□□□ 0.16
CHMP5-202ENST00000419016 TMEM179Q6ZVK1 233 aa16.07■□□□□ 0.16
CHMP5-202ENST00000419016 CLEC10AQ8IUN9 316 aa16.07■□□□□ 0.16
CHMP5-202ENST00000419016 MKL1Q969V6 931 aa16.07■□□□□ 0.16
CHMP5-202ENST00000419016 ORC3Q9UBD5 711 aaPredicted RBP16.07■□□□□ 0.16
CHMP5-202ENST00000419016 STK36Q9NRP7 1315 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 PHF20L1A8MW92 1017 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 PPFIA3O75145 1194 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 FMNL1O95466 1100 aaPredicted RBP16.06■□□□□ 0.16
CHMP5-202ENST00000419016 GRM4Q14833 912 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 PPP4R3BQ5MIZ7 849 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 TMTC3Q6ZXV5 915 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 KANSL2Q9H9L4 492 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 GGA3Q9NZ52 723 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 NYAP2Q9P242 653 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 PALM3A6NDB9 673 aaPredicted RBP16.06■□□□□ 0.16
CHMP5-202ENST00000419016 MPHOSPH10O00566 681 aaKnown RBP16.06■□□□□ 0.16
CHMP5-202ENST00000419016 ZSCAN22P10073 491 aaPredicted RBP16.06■□□□□ 0.16
CHMP5-202ENST00000419016 MIGA2Q7L4E1 593 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 FAM184AQ8NB25 1140 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 RGS22Q8NE09 1264 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 PHKBQ93100 1093 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 CLIP2Q9UDT6 1046 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 MAD2L2Q9UI95 211 aa16.06■□□□□ 0.16
CHMP5-202ENST00000419016 GDF11O95390 407 aa16.05■□□□□ 0.16
CHMP5-202ENST00000419016 PLEKHA8P1O95397 391 aa16.05■□□□□ 0.16
CHMP5-202ENST00000419016 GH2P01242 217 aa16.05■□□□□ 0.16
CHMP5-202ENST00000419016 SNHG28P0DPA3 235 aa16.05■□□□□ 0.16
CHMP5-202ENST00000419016 SEPT2Q15019 361 aa16.05■□□□□ 0.16
CHMP5-202ENST00000419016 NBPF12Q5TAG4 269 aaPredicted RBP16.05■□□□□ 0.16
CHMP5-202ENST00000419016 CTCFLQ8NI51 663 aaPredicted RBP16.05■□□□□ 0.16
CHMP5-202ENST00000419016 KIF3AQ9Y496 699 aa16.05■□□□□ 0.16
CHMP5-202ENST00000419016 PPP2R3BQ9Y5P8 575 aa16.05■□□□□ 0.16
CHMP5-202ENST00000419016 POTECB2RU33 542 aa16.04■□□□□ 0.16
CHMP5-202ENST00000419016 KIF5BP33176 963 aa16.04■□□□□ 0.16
CHMP5-202ENST00000419016 CMTR1Q8N1G2 835 aaKnown RBP16.04■□□□□ 0.16
CHMP5-202ENST00000419016 SRBD1Q8N5C6 995 aaKnown RBP16.04■□□□□ 0.16
CHMP5-202ENST00000419016 EEF2P13639 858 aaKnown RBP16.04■□□□□ 0.16
CHMP5-202ENST00000419016 CAP2P40123 477 aa16.04■□□□□ 0.16
CHMP5-202ENST00000419016 SSRP1Q08945 709 aaKnown RBP16.04■□□□□ 0.16
CHMP5-202ENST00000419016 USP50Q70EL3 339 aaPredicted RBP16.04■□□□□ 0.16
CHMP5-202ENST00000419016 STAG2Q8N3U4 1231 aa16.04■□□□□ 0.16
CHMP5-202ENST00000419016 RNF26Q9BY78 433 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms