RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
RFC1-203ENST00000418436 IRF6O14896 467 aa12.62□□□□□ -0.39
RFC1-203ENST00000418436 POLR3DP05423 398 aaPredicted RBP12.62□□□□□ -0.39
RFC1-203ENST00000418436 PTPRAP18433 802 aa12.62□□□□□ -0.39
RFC1-203ENST00000418436 GNAT2P19087 354 aa12.62□□□□□ -0.39
RFC1-203ENST00000418436 CTCFP49711 727 aaPredicted RBP12.62□□□□□ -0.39
RFC1-203ENST00000418436 GTF2A2P52657 109 aa12.62□□□□□ -0.39
RFC1-203ENST00000418436 GIMAP6Q6P9H5 292 aa12.62□□□□□ -0.39
RFC1-203ENST00000418436 CRACR2BQ8N4Y2 399 aaPredicted RBP12.62□□□□□ -0.39
RFC1-203ENST00000418436 SERPINB13Q9UIV8 391 aa12.62□□□□□ -0.39
RFC1-203ENST00000418436 KCNH4Q9UQ05 1017 aa12.62□□□□□ -0.39
RFC1-203ENST00000418436 MYH8P13535 1937 aa12.62□□□□□ -0.39
RFC1-203ENST00000418436 NEFLP07196 543 aa12.61□□□□□ -0.39
RFC1-203ENST00000418436 HSPA8P11142 646 aaKnown RBP12.61□□□□□ -0.39
RFC1-203ENST00000418436 SLC4A8Q2Y0W8 1093 aa12.61□□□□□ -0.39
RFC1-203ENST00000418436 TTC22Q5TAA0 569 aa12.61□□□□□ -0.39
RFC1-203ENST00000418436 C12orf60Q5U649 245 aa12.61□□□□□ -0.39
RFC1-203ENST00000418436 PTPN18Q99952 460 aa12.61□□□□□ -0.39
RFC1-203ENST00000418436 CFHR5Q9BXR6 569 aa12.61□□□□□ -0.39
RFC1-203ENST00000418436 PICK1Q9NRD5 415 aa12.61□□□□□ -0.39
RFC1-203ENST00000418436 HELLSQ9NRZ9 838 aa12.61□□□□□ -0.39
RFC1-203ENST00000418436 GINM1Q9NU53 330 aa12.61□□□□□ -0.39
RFC1-203ENST00000418436 AFG3L2Q9Y4W6 797 aa12.61□□□□□ -0.39
RFC1-203ENST00000418436 PATL2C9JE40 543 aaKnown RBP12.6□□□□□ -0.39
RFC1-203ENST00000418436 USP17L12C9JPN9 530 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 USP17L21D6R901 530 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 IGF2BP3O00425 579 aaKnown RBP eCLIP12.6□□□□□ -0.39
RFC1-203ENST00000418436 CXCL11O14625 94 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 TRPA1O75762 1119 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 CYP2D6P10635 497 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 GSPT1P15170 499 aaKnown RBP12.6□□□□□ -0.39
RFC1-203ENST00000418436 SDSP20132 328 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 SHMT1P34896 483 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 JAG1P78504 1218 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 SNAPC2Q13487 334 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 SBK1Q52WX2 424 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 CTR9Q6PD62 1173 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 BRI3BPQ8WY22 251 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 RILPL2Q969X0 211 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 DDRGK1Q96HY6 314 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 TRIM34Q9BYJ4 488 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 EPB41L4AQ9HCS5 686 aaPredicted RBP12.6□□□□□ -0.39
RFC1-203ENST00000418436 ZHX2Q9Y6X8 837 aa12.6□□□□□ -0.39
RFC1-203ENST00000418436 CCL15-CCL14A0A0B4J2E2 113 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 A0A0D9SFI3 127 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 SMIM22K7EJ46 135 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 ALDH1A1P00352 501 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 ASNSP08243 561 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 CETPP11597 493 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 MMRN1Q13201 1228 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 MOGSQ13724 837 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 CCL15Q16663 113 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 ERICH6BQ5W0A0 696 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 IFNL3Q8IZI9 196 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 FAM227BQ96M60 508 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 TBC1D2Q9BYX2 928 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 PRDM10Q9NQV6 1147 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.59□□□□□ -0.39
RFC1-203ENST00000418436 ARPP21Q9UBL0 812 aaPredicted RBP12.59□□□□□ -0.39
RFC1-203ENST00000418436 SWAP70Q9UH65 585 aa12.59□□□□□ -0.39
RFC1-203ENST00000418436 CYP2D7A0A087X1C5 515 aa12.58□□□□□ -0.4
RFC1-203ENST00000418436 A0A0G2JLL6 359 aaPredicted RBP12.58□□□□□ -0.4
RFC1-203ENST00000418436 USP17L5A8MUK1 530 aa12.58□□□□□ -0.4
RFC1-203ENST00000418436 FOXP2O15409 715 aa12.58□□□□□ -0.4
RFC1-203ENST00000418436 LBX1P52954 281 aa12.58□□□□□ -0.4
RFC1-203ENST00000418436 NMIQ13287 307 aaPredicted RBP12.58□□□□□ -0.4
RFC1-203ENST00000418436 SHROOM1Q2M3G4 852 aaPredicted RBP12.58□□□□□ -0.4
RFC1-203ENST00000418436 MCMDC2Q4G0Z9 681 aa12.58□□□□□ -0.4
RFC1-203ENST00000418436 CCDC129Q6ZRS4 1044 aa12.58□□□□□ -0.4
RFC1-203ENST00000418436 PRRT2Q7Z6L0 340 aaPredicted RBP12.58□□□□□ -0.4
RFC1-203ENST00000418436 CCDC84Q86UT8 332 aaPredicted RBP12.58□□□□□ -0.4
RFC1-203ENST00000418436 AMOTL1Q8IY63 956 aa12.58□□□□□ -0.4
RFC1-203ENST00000418436 DYNLL2Q96FJ2 89 aa12.58□□□□□ -0.4
RFC1-203ENST00000418436 CCDC136Q96JN2 1154 aa12.58□□□□□ -0.4
RFC1-203ENST00000418436 WDR18Q9BV38 432 aa12.58□□□□□ -0.4
RFC1-203ENST00000418436 ZCCHC17Q9NP64 241 aaKnown RBP12.58□□□□□ -0.4
RFC1-203ENST00000418436 TSKSQ9UJT2 592 aa12.58□□□□□ -0.4
RFC1-203ENST00000418436 ZBTB21Q9ULJ3 1066 aa12.58□□□□□ -0.4
RFC1-203ENST00000418436 LOC285556D6RIA3 1793 aa12.58□□□□□ -0.4
RFC1-203ENST00000418436 ROBO3Q96MS0 1386 aa12.57□□□□□ -0.4
RFC1-203ENST00000418436 HIP1O00291 1037 aa12.57□□□□□ -0.4
RFC1-203ENST00000418436 GDF11O95390 407 aa12.57□□□□□ -0.4
RFC1-203ENST00000418436 PBX2P40425 430 aa12.57□□□□□ -0.4
RFC1-203ENST00000418436 CERKLQ49MI3 558 aaPredicted RBP12.57□□□□□ -0.4
RFC1-203ENST00000418436 NOM1Q5C9Z4 860 aaKnown RBP12.57□□□□□ -0.4
RFC1-203ENST00000418436 OTUD7BQ6GQQ9 843 aa12.57□□□□□ -0.4
RFC1-203ENST00000418436 C16orf86Q6ZW13 317 aa12.57□□□□□ -0.4
RFC1-203ENST00000418436 FAM43AQ8N2R8 423 aa12.57□□□□□ -0.4
RFC1-203ENST00000418436 ZNF280CQ8ND82 737 aa12.57□□□□□ -0.4
RFC1-203ENST00000418436 CASP8AP2Q9UKL3 1982 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 BTBD19C9JJ37 291 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 TBC1D8O95759 1140 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 GH2P01242 217 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 APPP05067 770 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 TDO2P48775 406 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 CDK8P49336 464 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 SPP2Q13103 211 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 ALX1Q15699 326 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 ABCB5Q2M3G0 1257 aa12.56□□□□□ -0.4
RFC1-203ENST00000418436 SH3D19Q5HYK7 790 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms