RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 NAPBQ9H115 298 aa15.56■□□□□ 0.08
HLA-DMB-258ENST00000418107 ZSWIM6Q9HCJ5 1215 aa15.56■□□□□ 0.08
HLA-DMB-258ENST00000418107 FOXD4L1Q9NU39 408 aa15.56■□□□□ 0.08
HLA-DMB-258ENST00000418107 RBM27Q9P2N5 1060 aaKnown RBP15.56■□□□□ 0.08
HLA-DMB-258ENST00000418107 BIN2Q9UBW5 565 aaPredicted RBP15.56■□□□□ 0.08
HLA-DMB-258ENST00000418107 MYH2Q9UKX2 1941 aa15.56■□□□□ 0.08
HLA-DMB-258ENST00000418107 LAMA4Q16363 1823 aa15.55■□□□□ 0.08
HLA-DMB-258ENST00000418107 MAST2Q6P0Q8 1798 aa15.55■□□□□ 0.08
HLA-DMB-258ENST00000418107 SALL1Q9NSC2 1324 aa15.55■□□□□ 0.08
HLA-DMB-258ENST00000418107 ZNF213O14771 459 aa15.55■□□□□ 0.08
HLA-DMB-258ENST00000418107 LDHCP07864 332 aa15.55■□□□□ 0.08
HLA-DMB-258ENST00000418107 GJB1P08034 283 aa15.55■□□□□ 0.08
HLA-DMB-258ENST00000418107 BCRP11274 1271 aa15.55■□□□□ 0.08
HLA-DMB-258ENST00000418107 HAND2P61296 217 aa15.55■□□□□ 0.08
HLA-DMB-258ENST00000418107 TMED8Q6PL24 325 aaPredicted RBP15.55■□□□□ 0.08
HLA-DMB-258ENST00000418107 UBE2Q1Q7Z7E8 422 aa15.55■□□□□ 0.08
HLA-DMB-258ENST00000418107 LCORLQ8N3X6 602 aa15.55■□□□□ 0.08
HLA-DMB-258ENST00000418107 RNF208Q9H0X6 261 aa15.55■□□□□ 0.08
HLA-DMB-258ENST00000418107 USP40Q9NVE5 1235 aa15.55■□□□□ 0.08
HLA-DMB-258ENST00000418107 IGSF3O75054 1194 aa15.54■□□□□ 0.08
HLA-DMB-258ENST00000418107 TDO2P48775 406 aa15.54■□□□□ 0.08
HLA-DMB-258ENST00000418107 FCGRTP55899 365 aa15.54■□□□□ 0.08
HLA-DMB-258ENST00000418107 FGD1P98174 961 aa15.54■□□□□ 0.08
HLA-DMB-258ENST00000418107 GABRQQ9UN88 632 aa15.54■□□□□ 0.08
HLA-DMB-258ENST00000418107 TAF6LQ9Y6J9 622 aa15.54■□□□□ 0.08
HLA-DMB-258ENST00000418107 E7EWF7 191 aa15.53■□□□□ 0.08
HLA-DMB-258ENST00000418107 CXCL11O14625 94 aa15.53■□□□□ 0.08
HLA-DMB-258ENST00000418107 HMGB1P09429 215 aaKnown RBP15.53■□□□□ 0.08
HLA-DMB-258ENST00000418107 RPS6KB1P23443 525 aa15.53■□□□□ 0.08
HLA-DMB-258ENST00000418107 AK2P54819 239 aa15.53■□□□□ 0.08
HLA-DMB-258ENST00000418107 DYNLL1P63167 89 aaKnown RBP15.53■□□□□ 0.08
HLA-DMB-258ENST00000418107 UBXN2AP68543 259 aa15.53■□□□□ 0.08
HLA-DMB-258ENST00000418107 ALX1Q15699 326 aa15.53■□□□□ 0.08
HLA-DMB-258ENST00000418107 SLF2Q8IX21 1173 aa15.53■□□□□ 0.08
HLA-DMB-258ENST00000418107 IFNL3Q8IZI9 196 aa15.53■□□□□ 0.08
HLA-DMB-258ENST00000418107 HTATIP2Q9BUP3 242 aa15.53■□□□□ 0.08
HLA-DMB-258ENST00000418107 CRNKL1Q9BZJ0 848 aaKnown RBP15.53■□□□□ 0.08
HLA-DMB-258ENST00000418107 ATRNL1Q5VV63 1379 aa15.53■□□□□ 0.08
HLA-DMB-258ENST00000418107 PHF20L1A8MW92 1017 aa15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 PRKAB2O43741 272 aa15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 TRDNQ13061 729 aa15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 ANKRD1Q15327 319 aa15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 RALYLQ86SE5 291 aaKnown RBP15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 ADGRA1Q86SQ6 560 aa15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 SCYL3Q8IZE3 742 aa15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 SLAIN1Q8ND83 568 aa15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 U2AF1L4Q8WU68 220 aaKnown RBP15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 TMX3Q96JJ7 454 aa15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 TTC14Q96N46 770 aa15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 UNC93B1Q9H1C4 597 aa15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 PICK1Q9NRD5 415 aa15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 AATFQ9NY61 560 aaKnown RBP eCLIP15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 LIMCH1Q9UPQ0 1083 aa15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 ZHX2Q9Y6X8 837 aa15.52■□□□□ 0.08
HLA-DMB-258ENST00000418107 BAZ2AQ9UIF9 1905 aaKnown RBP15.51■□□□□ 0.07
HLA-DMB-258ENST00000418107 A0A0G2JLL6 359 aaPredicted RBP15.51■□□□□ 0.07
HLA-DMB-258ENST00000418107 GSG1L2A8MUP6 293 aa15.51■□□□□ 0.07
HLA-DMB-258ENST00000418107 FOXP2O15409 715 aa15.51■□□□□ 0.07
HLA-DMB-258ENST00000418107 FARP2O94887 1054 aaPredicted RBP15.51■□□□□ 0.07
HLA-DMB-258ENST00000418107 BAG3O95817 575 aa15.51■□□□□ 0.07
HLA-DMB-258ENST00000418107 GADL1Q6ZQY3 521 aa15.51■□□□□ 0.07
HLA-DMB-258ENST00000418107 PRRT2Q7Z6L0 340 aaPredicted RBP15.51■□□□□ 0.07
HLA-DMB-258ENST00000418107 ADCY3O60266 1144 aa15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 SLURP2P0DP57 97 aa15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 ELNP15502 786 aa15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 PTPRAP18433 802 aa15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 FLT3LGP49771 235 aa15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 STOX1Q6ZVD7 989 aa15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 SH3BP5LQ7L8J4 393 aa15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 FASTKD5Q7L8L6 764 aaKnown RBP15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 ZSCAN29Q8IWY8 852 aaPredicted RBP15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 ZNF384Q8TF68 577 aa15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 ZSCAN31Q96LW9 406 aaPredicted RBP15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 TCEANC2Q96MN5 208 aa15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 RIOK1Q9BRS2 568 aaKnown RBP15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 LARP6Q9BRS8 491 aaKnown RBP15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 ZMYM6O95789 1325 aa15.5■□□□□ 0.07
HLA-DMB-258ENST00000418107 ENTPD3O75355 529 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 DHX32Q7L7V1 743 aaKnown RBP15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 NCOA7Q8NI08 942 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 SDR42E1Q8WUS8 393 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 IDI2Q9BXS1 227 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 PRO3102Q9H379 93 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 EPB41L4AQ9HCS5 686 aaPredicted RBP15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 CHMP5Q9NZZ3 219 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 AFG3L2Q9Y4W6 797 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 NR2E3Q9Y5X4 410 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 MGAMO43451 1857 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 GAKO14976 1311 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 MINDY4BA8MYZ0 360 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 SGPL1O95470 568 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 INHAP05111 366 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 Q6ZUG5 572 aa15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 ALDH8A1Q9H2A2 487 aaPredicted RBP15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.49■□□□□ 0.07
HLA-DMB-258ENST00000418107 LAMA3Q16787 3333 aa15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 MROH7-TTC4A0A0A0MT08 1334 aa15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 DDTLA6NHG4 134 aaPredicted RBP15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 TRIM75PA6NK02 468 aa15.48■□□□□ 0.07
HLA-DMB-258ENST00000418107 TNPO2O14787 897 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms