RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 RAB6AP20340 208 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 SGO2Q562F6 1265 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 KIAA1211LQ6NV74 962 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 KCT2Q8NC54 265 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 RIN3Q8TB24 985 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 SH3TC2Q8TF17 1288 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 FBLIM1Q8WUP2 373 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 CCDC74BQ96LY2 380 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 PSMG3-AS1Q96PY0 264 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 FOXQ1Q9C009 403 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 SEMA6CQ9H3T2 930 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 PHAXQ9H814 394 aaKnown RBP7.55□□□□□ -1.2
RFC4-204ENST00000417876 SSU72Q9NP77 194 aaKnown RBP7.55□□□□□ -1.2
RFC4-204ENST00000417876 PCOLCE2Q9UKZ9 415 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 SLC12A7Q9Y666 1083 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 SBNO2Q9Y2G9 1366 aa7.55□□□□□ -1.2
RFC4-204ENST00000417876 FAM181BA6NEQ2 426 aa7.54□□□□□ -1.2
RFC4-204ENST00000417876 C9orf172C9J069 976 aa7.54□□□□□ -1.2
RFC4-204ENST00000417876 CCNFP41002 786 aa7.54□□□□□ -1.2
RFC4-204ENST00000417876 ADGRE1Q14246 886 aa7.54□□□□□ -1.2
RFC4-204ENST00000417876 MBTPS1Q14703 1052 aa7.54□□□□□ -1.2
RFC4-204ENST00000417876 GNPTABQ3T906 1256 aa7.54□□□□□ -1.2
RFC4-204ENST00000417876 ARMCX6Q7L4S7 300 aa7.54□□□□□ -1.2
RFC4-204ENST00000417876 ARMC10Q8N2F6 343 aa7.54□□□□□ -1.2
RFC4-204ENST00000417876 CYB5D2Q8WUJ1 264 aa7.54□□□□□ -1.2
RFC4-204ENST00000417876 MEGF10Q96KG7 1140 aa7.54□□□□□ -1.2
RFC4-204ENST00000417876 FAM86C1Q9NVL1 165 aa7.54□□□□□ -1.2
RFC4-204ENST00000417876 PFDN2Q9UHV9 154 aa7.54□□□□□ -1.2
RFC4-204ENST00000417876 LRIG2O94898 1065 aa7.53□□□□□ -1.2
RFC4-204ENST00000417876 GBP1P32455 592 aa7.53□□□□□ -1.2
RFC4-204ENST00000417876 PMS1P54277 932 aaKnown RBP7.53□□□□□ -1.2
RFC4-204ENST00000417876 SLC7A5Q01650 507 aa7.53□□□□□ -1.2
RFC4-204ENST00000417876 TDRD10Q5VZ19 366 aaKnown RBP7.53□□□□□ -1.2
RFC4-204ENST00000417876 SEZ6L2Q6UXD5 910 aa7.53□□□□□ -1.2
RFC4-204ENST00000417876 DZIP1LQ8IYY4 767 aaKnown RBP7.53□□□□□ -1.2
RFC4-204ENST00000417876 EZH1Q92800 747 aaPredicted RBP7.53□□□□□ -1.2
RFC4-204ENST00000417876 VWCEQ96DN2 955 aa7.53□□□□□ -1.2
RFC4-204ENST00000417876 CEP41Q9BYV8 373 aa7.53□□□□□ -1.2
RFC4-204ENST00000417876 SUCOQ9UBS9 1254 aaKnown RBP7.53□□□□□ -1.2
RFC4-204ENST00000417876 SUSD2Q9UGT4 822 aa7.53□□□□□ -1.2
RFC4-204ENST00000417876 ZMYM5Q9UJ78 669 aa7.53□□□□□ -1.2
RFC4-204ENST00000417876 DAGLAQ9Y4D2 1042 aa7.53□□□□□ -1.2
RFC4-204ENST00000417876 SART1O43290 800 aaKnown RBP7.52□□□□□ -1.21
RFC4-204ENST00000417876 TP53P04637 393 aaPredicted RBP7.52□□□□□ -1.21
RFC4-204ENST00000417876 USP11P51784 963 aa7.52□□□□□ -1.21
RFC4-204ENST00000417876 NRG1Q02297 640 aaPredicted RBP7.52□□□□□ -1.21
RFC4-204ENST00000417876 IFRD2Q12894 506 aaPredicted RBP7.52□□□□□ -1.21
RFC4-204ENST00000417876 SQSTM1Q13501 440 aa7.52□□□□□ -1.21
RFC4-204ENST00000417876 NCAPHQ15003 741 aa7.52□□□□□ -1.21
RFC4-204ENST00000417876 MTERF2Q49AM1 385 aa7.52□□□□□ -1.21
RFC4-204ENST00000417876 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.52□□□□□ -1.21
RFC4-204ENST00000417876 JMYQ8N9B5 988 aa7.52□□□□□ -1.21
RFC4-204ENST00000417876 DNAJB8Q8NHS0 232 aa7.52□□□□□ -1.21
RFC4-204ENST00000417876 ZNF512BQ96KM6 892 aaPredicted RBP7.52□□□□□ -1.21
RFC4-204ENST00000417876 LEMD3Q9Y2U8 911 aa7.52□□□□□ -1.21
RFC4-204ENST00000417876 KDM2BQ8NHM5 1336 aa7.52□□□□□ -1.21
RFC4-204ENST00000417876 CNTNAP4Q9C0A0 1308 aa7.52□□□□□ -1.21
RFC4-204ENST00000417876 ESYT3A0FGR9 886 aa7.51□□□□□ -1.21
RFC4-204ENST00000417876 ENPP3O14638 875 aa7.51□□□□□ -1.21
RFC4-204ENST00000417876 SUSD5O60279 629 aa7.51□□□□□ -1.21
RFC4-204ENST00000417876 SLITRK5O94991 958 aa7.51□□□□□ -1.21
RFC4-204ENST00000417876 CANXP27824 592 aaKnown RBP7.51□□□□□ -1.21
RFC4-204ENST00000417876 AXDND1Q5T1B0 1012 aaPredicted RBP7.51□□□□□ -1.21
RFC4-204ENST00000417876 CDH24Q86UP0 819 aa7.51□□□□□ -1.21
RFC4-204ENST00000417876 MFSD2AQ8NA29 543 aa7.51□□□□□ -1.21
RFC4-204ENST00000417876 ST13P5Q8NFI4 369 aaPredicted RBP7.51□□□□□ -1.21
RFC4-204ENST00000417876 SCARF2Q96GP6 870 aaPredicted RBP7.51□□□□□ -1.21
RFC4-204ENST00000417876 C1GALT1Q9NS00 363 aa7.51□□□□□ -1.21
RFC4-204ENST00000417876 CEP131Q9UPN4 1083 aa7.51□□□□□ -1.21
RFC4-204ENST00000417876 GAS2O43903 313 aaKnown RBP7.5□□□□□ -1.21
RFC4-204ENST00000417876 APBA3O96018 575 aa7.5□□□□□ -1.21
RFC4-204ENST00000417876 BMP3P12645 472 aa7.5□□□□□ -1.21
RFC4-204ENST00000417876 HSD3B2P26439 372 aa7.5□□□□□ -1.21
RFC4-204ENST00000417876 CHMP4BP1P59074 171 aa7.5□□□□□ -1.21
RFC4-204ENST00000417876 SLC10A6Q3KNW5 377 aa7.5□□□□□ -1.21
RFC4-204ENST00000417876 EEPD1Q7L9B9 569 aa7.5□□□□□ -1.21
RFC4-204ENST00000417876 DHRS1Q96LJ7 313 aa7.5□□□□□ -1.21
RFC4-204ENST00000417876 MYRFLQ96LU7 910 aa7.5□□□□□ -1.21
RFC4-204ENST00000417876 NACC1Q96RE7 527 aa7.5□□□□□ -1.21
RFC4-204ENST00000417876 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.5□□□□□ -1.21
RFC4-204ENST00000417876 CBFA2T2O43439 604 aa7.49□□□□□ -1.21
RFC4-204ENST00000417876 CLEC3AO75596 197 aa7.49□□□□□ -1.21
RFC4-204ENST00000417876 MAP4P27816 1152 aaKnown RBP7.49□□□□□ -1.21
RFC4-204ENST00000417876 CDK5R2Q13319 367 aa7.49□□□□□ -1.21
RFC4-204ENST00000417876 NBPF12Q5TAG4 269 aaPredicted RBP7.49□□□□□ -1.21
RFC4-204ENST00000417876 DCAF15Q66K64 600 aa7.49□□□□□ -1.21
RFC4-204ENST00000417876 LETMD1Q6P1Q0 360 aa7.49□□□□□ -1.21
RFC4-204ENST00000417876 FAM20CQ8IXL6 584 aa7.49□□□□□ -1.21
RFC4-204ENST00000417876 ZNF513Q8N8E2 541 aaPredicted RBP7.49□□□□□ -1.21
RFC4-204ENST00000417876 MIPEPQ99797 713 aa7.49□□□□□ -1.21
RFC4-204ENST00000417876 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.49□□□□□ -1.21
RFC4-204ENST00000417876 FANCLQ9NW38 375 aa7.49□□□□□ -1.21
RFC4-204ENST00000417876 SHOXO15266 292 aa7.48□□□□□ -1.21
RFC4-204ENST00000417876 ADCY3O60266 1144 aa7.48□□□□□ -1.21
RFC4-204ENST00000417876 EPHX1P07099 455 aa7.48□□□□□ -1.21
RFC4-204ENST00000417876 FAM153BP0C7A2 387 aa7.48□□□□□ -1.21
RFC4-204ENST00000417876 CHRNA4P43681 627 aa7.48□□□□□ -1.21
RFC4-204ENST00000417876 SSRP1Q08945 709 aaKnown RBP7.48□□□□□ -1.21
RFC4-204ENST00000417876 C2orf27AQ580R0 203 aa7.48□□□□□ -1.21
RFC4-204ENST00000417876 TXNRD3Q86VQ6 643 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms