RNA–Protein interactions for RNA: ENST00000417382.5

HMG20B-204, Transcript of high mobility group 20B, humanhuman

TSL 4

Gene HMG20B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-204ENST00000417382 PDE4AP27815 886 aa25.21■■□□□ 1.63
HMG20B-204ENST00000417382 GCLCP48506 637 aaPredicted RBP25.21■■□□□ 1.63
HMG20B-204ENST00000417382 SMCR8Q8TEV9 937 aaPredicted RBP25.21■■□□□ 1.63
HMG20B-204ENST00000417382 RILPL2Q969X0 211 aa25.21■■□□□ 1.63
HMG20B-204ENST00000417382 ZNF287Q9HBT7 754 aa25.21■■□□□ 1.63
HMG20B-204ENST00000417382 SMIM22K7EJ46 135 aa25.2■■□□□ 1.62
HMG20B-204ENST00000417382 FEZ1Q99689 392 aa25.2■■□□□ 1.62
HMG20B-204ENST00000417382 ASCC2Q9H1I8 757 aaPredicted RBP25.2■■□□□ 1.62
HMG20B-204ENST00000417382 MINDY4BA8MYZ0 360 aa25.19■■□□□ 1.62
HMG20B-204ENST00000417382 HIP1O00291 1037 aa25.19■■□□□ 1.62
HMG20B-204ENST00000417382 AKR1B1P15121 316 aa25.19■■□□□ 1.62
HMG20B-204ENST00000417382 ALX1Q15699 326 aa25.19■■□□□ 1.62
HMG20B-204ENST00000417382 NAPBQ9H115 298 aa25.19■■□□□ 1.62
HMG20B-204ENST00000417382 SDSP20132 328 aa25.18■■□□□ 1.62
HMG20B-204ENST00000417382 PRMT2P55345 433 aa25.18■■□□□ 1.62
HMG20B-204ENST00000417382 CAP1Q01518 475 aa25.18■■□□□ 1.62
HMG20B-204ENST00000417382 ACER1Q8TDN7 264 aa25.18■■□□□ 1.62
HMG20B-204ENST00000417382 GTF3C2Q8WUA4 911 aaPredicted RBP25.18■■□□□ 1.62
HMG20B-204ENST00000417382 FAM227BQ96M60 508 aa25.18■■□□□ 1.62
HMG20B-204ENST00000417382 HPS5Q9UPZ3 1129 aa25.18■■□□□ 1.62
HMG20B-204ENST00000417382 PTPN22Q9Y2R2 807 aa25.18■■□□□ 1.62
HMG20B-204ENST00000417382 A0A0D9SFI3 127 aa25.17■■□□□ 1.62
HMG20B-204ENST00000417382 FOXP2O15409 715 aa25.17■■□□□ 1.62
HMG20B-204ENST00000417382 SLC3A2P08195 630 aaKnown RBP25.17■■□□□ 1.62
HMG20B-204ENST00000417382 IRX3P78415 501 aaPredicted RBP25.17■■□□□ 1.62
HMG20B-204ENST00000417382 FAM110CQ1W6H9 321 aa25.17■■□□□ 1.62
HMG20B-204ENST00000417382 CCDC129Q6ZRS4 1044 aa25.17■■□□□ 1.62
HMG20B-204ENST00000417382 SH2D4AQ9H788 454 aa25.17■■□□□ 1.62
HMG20B-204ENST00000417382 KANSL2Q9H9L4 492 aa25.17■■□□□ 1.62
HMG20B-204ENST00000417382 MKNK2Q9HBH9 465 aa25.17■■□□□ 1.62
HMG20B-204ENST00000417382 ZMYM6O95789 1325 aa25.16■■□□□ 1.62
HMG20B-204ENST00000417382 MFAP1P55081 439 aaKnown RBP25.16■■□□□ 1.62
HMG20B-204ENST00000417382 ICA1Q05084 483 aa25.16■■□□□ 1.62
HMG20B-204ENST00000417382 NMIQ13287 307 aaPredicted RBP25.16■■□□□ 1.62
HMG20B-204ENST00000417382 ARHGEF10LQ9HCE6 1279 aa25.16■■□□□ 1.62
HMG20B-204ENST00000417382 MYH8P13535 1937 aa25.16■■□□□ 1.62
HMG20B-204ENST00000417382 A0A1W2PRG0 241 aa25.15■■□□□ 1.62
HMG20B-204ENST00000417382 USP17L15C9J2P7 530 aa25.15■■□□□ 1.62
HMG20B-204ENST00000417382 USP17L13C9JLJ4 530 aa25.15■■□□□ 1.62
HMG20B-204ENST00000417382 USP17L11C9JVI0 530 aa25.15■■□□□ 1.62
HMG20B-204ENST00000417382 USP17L18D6R9N7 530 aa25.15■■□□□ 1.62
HMG20B-204ENST00000417382 USP17L22D6RA61 530 aa25.15■■□□□ 1.62
HMG20B-204ENST00000417382 USP17L17D6RBQ6 530 aa25.15■■□□□ 1.62
HMG20B-204ENST00000417382 USP17L19D6RCP7 530 aa25.15■■□□□ 1.62
HMG20B-204ENST00000417382 USP17L20D6RJB6 530 aa25.15■■□□□ 1.62
HMG20B-204ENST00000417382 RASA1P20936 1047 aa25.15■■□□□ 1.62
HMG20B-204ENST00000417382 USP17L24Q0WX57 530 aa25.15■■□□□ 1.62
HMG20B-204ENST00000417382 TTC22Q5TAA0 569 aa25.15■■□□□ 1.62
HMG20B-204ENST00000417382 TMX2Q9Y320 296 aa25.15■■□□□ 1.62
HMG20B-204ENST00000417382 CCDC171Q6TFL3 1326 aa25.14■■□□□ 1.62
HMG20B-204ENST00000417382 VCAM1P19320 739 aa25.14■■□□□ 1.62
HMG20B-204ENST00000417382 HOXD10P28358 340 aa25.14■■□□□ 1.62
HMG20B-204ENST00000417382 PSMC4P43686 418 aa25.14■■□□□ 1.62
HMG20B-204ENST00000417382 FCGRTP55899 365 aa25.14■■□□□ 1.62
HMG20B-204ENST00000417382 PDE4BQ07343 736 aa25.14■■□□□ 1.62
HMG20B-204ENST00000417382 PPARAQ07869 468 aa25.14■■□□□ 1.62
HMG20B-204ENST00000417382 SIAH1Q8IUQ4 282 aa25.14■■□□□ 1.62
HMG20B-204ENST00000417382 LPAR1Q92633 364 aa25.14■■□□□ 1.62
HMG20B-204ENST00000417382 ARHGAP39Q9C0H5 1083 aa25.14■■□□□ 1.62
HMG20B-204ENST00000417382 MORF4L1Q9UBU8 362 aa25.14■■□□□ 1.62
HMG20B-204ENST00000417382 ANAPC4Q9UJX5 808 aa25.14■■□□□ 1.62
HMG20B-204ENST00000417382 CATSPERGQ6ZRH7 1159 aa25.13■■□□□ 1.61
HMG20B-204ENST00000417382 ANKRD13CQ8N6S4 541 aa25.13■■□□□ 1.61
HMG20B-204ENST00000417382 TRIM47Q96LD4 638 aa25.13■■□□□ 1.61
HMG20B-204ENST00000417382 P2RX7Q99572 595 aaKnown RBP25.13■■□□□ 1.61
HMG20B-204ENST00000417382 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.13■■□□□ 1.61
HMG20B-204ENST00000417382 DIAPH3Q9NSV4 1193 aa25.13■■□□□ 1.61
HMG20B-204ENST00000417382 HSPD1P10809 573 aaKnown RBP25.12■■□□□ 1.61
HMG20B-204ENST00000417382 CTGFP29279 349 aa25.12■■□□□ 1.61
HMG20B-204ENST00000417382 HERVK_113P62684 666 aa25.12■■□□□ 1.61
HMG20B-204ENST00000417382 ZYXQ15942 572 aaKnown RBP25.12■■□□□ 1.61
HMG20B-204ENST00000417382 VPS53Q5VIR6 699 aa25.12■■□□□ 1.61
HMG20B-204ENST00000417382 CENPQQ7L2Z9 268 aaPredicted RBP25.12■■□□□ 1.61
HMG20B-204ENST00000417382 ZNF589Q86UQ0 364 aaPredicted RBP25.12■■□□□ 1.61
HMG20B-204ENST00000417382 ZNF444Q8N0Y2 327 aaPredicted RBP25.12■■□□□ 1.61
HMG20B-204ENST00000417382 CCDC85CA6NKD9 419 aa25.11■■□□□ 1.61
HMG20B-204ENST00000417382 CAPN15O75808 1086 aa25.11■■□□□ 1.61
HMG20B-204ENST00000417382 FMNL1O95466 1100 aaPredicted RBP25.11■■□□□ 1.61
HMG20B-204ENST00000417382 GSPT1P15170 499 aaKnown RBP25.11■■□□□ 1.61
HMG20B-204ENST00000417382 LBX2Q6XYB7 198 aa25.11■■□□□ 1.61
HMG20B-204ENST00000417382 VCPKMTQ9H867 229 aa25.11■■□□□ 1.61
HMG20B-204ENST00000417382 SRRDQ9UH36 339 aa25.11■■□□□ 1.61
HMG20B-204ENST00000417382 HTTP42858 3142 aa25.11■■□□□ 1.61
HMG20B-204ENST00000417382 GREB1LQ9C091 1923 aaPredicted RBP25.1■■□□□ 1.61
HMG20B-204ENST00000417382 PLIN4Q96Q06 1357 aa25.1■■□□□ 1.61
HMG20B-204ENST00000417382 IGKV6D-41A0A0C4DH26 115 aa25.1■■□□□ 1.61
HMG20B-204ENST00000417382 FGAP02671 866 aa25.1■■□□□ 1.61
HMG20B-204ENST00000417382 EEF2P13639 858 aaKnown RBP25.1■■□□□ 1.61
HMG20B-204ENST00000417382 ARMC5Q96C12 935 aa25.1■■□□□ 1.61
HMG20B-204ENST00000417382 NYAP2Q9P242 653 aa25.1■■□□□ 1.61
HMG20B-204ENST00000417382 SYNPO2Q9UMS6 1093 aa25.1■■□□□ 1.61
HMG20B-204ENST00000417382 FGRP09769 529 aa25.09■■□□□ 1.61
HMG20B-204ENST00000417382 RPAP3Q9H6T3 665 aaPredicted RBP25.09■■□□□ 1.61
HMG20B-204ENST00000417382 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.09■■□□□ 1.61
HMG20B-204ENST00000417382 CWC27Q6UX04 472 aaKnown RBP25.08■■□□□ 1.61
HMG20B-204ENST00000417382 CLEC10AQ8IUN9 316 aa25.08■■□□□ 1.61
HMG20B-204ENST00000417382 GPRC5AQ8NFJ5 357 aa25.08■■□□□ 1.61
HMG20B-204ENST00000417382 NEDD1Q8NHV4 660 aa25.08■■□□□ 1.61
HMG20B-204ENST00000417382 PRDM1O75626 825 aa25.07■■□□□ 1.6
HMG20B-204ENST00000417382 PPP4R3BQ5MIZ7 849 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms