RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.22□□□□□ -1.25
CCNT1-202ENST00000417344 SPNS2Q8IVW8 549 aa7.22□□□□□ -1.25
CCNT1-202ENST00000417344 KLHL23Q8NBE8 558 aa7.22□□□□□ -1.25
CCNT1-202ENST00000417344 PROCA1Q8NCQ7 364 aaPredicted RBP7.22□□□□□ -1.25
CCNT1-202ENST00000417344 SMARCC2Q8TAQ2 1214 aa7.22□□□□□ -1.25
CCNT1-202ENST00000417344 ZNF526Q8TF50 670 aaPredicted RBP7.22□□□□□ -1.25
CCNT1-202ENST00000417344 LMBR1Q8WVP7 490 aa7.22□□□□□ -1.25
CCNT1-202ENST00000417344 SCLT1Q96NL6 688 aa7.22□□□□□ -1.25
CCNT1-202ENST00000417344 CHD2O14647 1828 aaKnown RBP7.21□□□□□ -1.26
CCNT1-202ENST00000417344 TARSL2A2RTX5 802 aaKnown RBP7.21□□□□□ -1.26
CCNT1-202ENST00000417344 SOWAHDA6NJG2 315 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 ENO4A6NNW6 628 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 PES1O00541 588 aaKnown RBP7.21□□□□□ -1.26
CCNT1-202ENST00000417344 PPP1R12BO60237 982 aaPredicted RBP7.21□□□□□ -1.26
CCNT1-202ENST00000417344 ZEB2O60315 1214 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 RAB27AP51159 221 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 NAP1L1P55209 391 aaKnown RBP7.21□□□□□ -1.26
CCNT1-202ENST00000417344 SNX1Q13596 522 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 KCNB1Q14721 858 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 E2F5Q15329 346 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 FILIP1LQ4L180 1135 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 TMEM132EQ6IEE7 984 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 SLC35F6Q8N357 371 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 DRAXINQ8NBI3 349 aaPredicted RBP7.21□□□□□ -1.26
CCNT1-202ENST00000417344 OR8K1Q8NGG5 319 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 RHPN1Q8TCX5 695 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 MAP4K1Q92918 833 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 RNF166Q96A37 237 aaPredicted RBP7.21□□□□□ -1.26
CCNT1-202ENST00000417344 HOOK2Q96ED9 719 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 GDAP1L1Q96MZ0 367 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 SELENOOQ9BVL4 669 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 STK31Q9BXU1 1019 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 SIL1Q9H173 461 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 DEPDC5O75140 1603 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 ABCC6O95255 1503 aa7.21□□□□□ -1.26
CCNT1-202ENST00000417344 CHL1O00533 1208 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 GLRX3O76003 335 aaKnown RBP7.2□□□□□ -1.26
CCNT1-202ENST00000417344 IFFO1Q0D2I5 559 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 MTMR2Q13614 643 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 TBC1D25Q3MII6 688 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 TMEM259Q4ZIN3 620 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 NAA35Q5VZE5 725 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 G2E3Q7L622 706 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 FUKQ8N0W3 1084 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 TCP11Q8WWU5 503 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 ACTR5Q9H9F9 607 aaPredicted RBP7.2□□□□□ -1.26
CCNT1-202ENST00000417344 HCSTQ9UBK5 93 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 GGA2Q9UJY4 613 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 TPX2Q9ULW0 747 aaKnown RBP7.2□□□□□ -1.26
CCNT1-202ENST00000417344 A0A0U1RQJ8 604 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 SURF6O75683 361 aaKnown RBP7.2□□□□□ -1.26
CCNT1-202ENST00000417344 NEFHP12036 1026 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 FLIIQ13045 1269 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 PDCLQ13371 301 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 NCAPH2Q6IBW4 605 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 RAD9BQ6WBX8 426 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 BRAPQ7Z569 592 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 RPUSD2Q8IZ73 545 aaKnown RBP7.2□□□□□ -1.26
CCNT1-202ENST00000417344 C3orf20Q8ND61 904 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 ATRIPQ8WXE1 791 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 CCDC114Q96M63 670 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 PANX2Q96RD6 677 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 NAA15Q9BXJ9 866 aaKnown RBP7.2□□□□□ -1.26
CCNT1-202ENST00000417344 TMX4Q9H1E5 349 aaPredicted RBP7.2□□□□□ -1.26
CCNT1-202ENST00000417344 PCDHGC3Q9UN70 934 aa7.2□□□□□ -1.26
CCNT1-202ENST00000417344 IFT172Q9UG01 1749 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 TET3O43151 1660 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 MAP3K5Q99683 1374 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 USP42Q9H9J4 1324 aaKnown RBP7.19□□□□□ -1.26
CCNT1-202ENST00000417344 AKR1B15C9JRZ8 316 aaPredicted RBP7.19□□□□□ -1.26
CCNT1-202ENST00000417344 OPA1O60313 960 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 SSBP05455 408 aaKnown RBP eCLIP7.19□□□□□ -1.26
CCNT1-202ENST00000417344 EPB41P11171 864 aaKnown RBP7.19□□□□□ -1.26
CCNT1-202ENST00000417344 ATP5JP18859 108 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 IL13P35225 146 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 AMPD2Q01433 879 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 SF3A1Q15459 793 aaKnown RBP7.19□□□□□ -1.26
CCNT1-202ENST00000417344 CAPRIN2Q6IMN6 1127 aaKnown RBP7.19□□□□□ -1.26
CCNT1-202ENST00000417344 OLFM4Q6UX06 510 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 RASGRP2Q7LDG7 609 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 TRIM74Q86UV6 250 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 TRIM73Q86UV7 250 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 SSH3Q8TE77 659 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 ZNF473Q8WTR7 871 aaKnown RBP7.19□□□□□ -1.26
CCNT1-202ENST00000417344 CDC5LQ99459 802 aaKnown RBP7.19□□□□□ -1.26
CCNT1-202ENST00000417344 LLPHQ9BRT6 129 aaKnown RBP7.19□□□□□ -1.26
CCNT1-202ENST00000417344 EPN3Q9H201 632 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 SLC39A2Q9NP94 309 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 RTEL1Q9NZ71 1219 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 MYO1AQ9UBC5 1043 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 TUBE1Q9UJT0 475 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 SLC27A5Q9Y2P5 690 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 ANKRD26Q9UPS8 1709 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 ARHGEF10O15013 1369 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 CRYBG1Q9Y4K1 1723 aa7.19□□□□□ -1.26
CCNT1-202ENST00000417344 SOCS7O14512 581 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 LSP1P33241 339 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 RFC5P40937 340 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 CCT2P78371 535 aaKnown RBP7.18□□□□□ -1.26
CCNT1-202ENST00000417344 IFT88Q13099 833 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms