RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 LARP6Q9BRS8 491 aaKnown RBP9.53□□□□□ -0.88
MDC1-203ENST00000417033 ZNF341Q9BYN7 854 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 RNF41Q9H4P4 317 aaPredicted RBP9.53□□□□□ -0.88
MDC1-203ENST00000417033 MKNK2Q9HBH9 465 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 ZSWIM6Q9HCJ5 1215 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 IL17RBQ9NRM6 502 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 ZSWIM5Q9P217 1185 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 SWAP70Q9UH65 585 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 HERC5Q9UII4 1024 aaKnown RBP9.53□□□□□ -0.88
MDC1-203ENST00000417033 ZBTB21Q9ULJ3 1066 aa9.53□□□□□ -0.88
MDC1-203ENST00000417033 ANGEL1Q9UNK9 670 aaKnown RBP9.53□□□□□ -0.88
MDC1-203ENST00000417033 GREB1LQ9C091 1923 aaPredicted RBP9.52□□□□□ -0.88
MDC1-203ENST00000417033 IGKV6D-41A0A0C4DH26 115 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 TSPY2A6NKD2 308 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 UBE2Q2LH0YL09 131 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 MPHOSPH10O00566 681 aaKnown RBP9.52□□□□□ -0.89
MDC1-203ENST00000417033 EIF5BO60841 1220 aaKnown RBP9.52□□□□□ -0.89
MDC1-203ENST00000417033 RPS6KB1P23443 525 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 CAP2P40123 477 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 EXOSC10Q01780 885 aaKnown RBP9.52□□□□□ -0.89
MDC1-203ENST00000417033 MKRN3Q13064 507 aaKnown RBP9.52□□□□□ -0.89
MDC1-203ENST00000417033 TTLL12Q14166 644 aaPredicted RBP9.52□□□□□ -0.89
MDC1-203ENST00000417033 KRT32Q14532 448 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 ABCB5Q2M3G0 1257 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 SUPT20HL1Q3ZLR7 823 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 CERKLQ49MI3 558 aaPredicted RBP9.52□□□□□ -0.89
MDC1-203ENST00000417033 CST9Q5W186 159 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 DCAF15Q66K64 600 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 BLOC1S2Q6QNY1 142 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.52□□□□□ -0.89
MDC1-203ENST00000417033 NOL8Q76FK4 1167 aaKnown RBP9.52□□□□□ -0.89
MDC1-203ENST00000417033 RASGRP2Q7LDG7 609 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 RAB11FIP4Q86YS3 637 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 ZNF444Q8N0Y2 327 aaPredicted RBP9.52□□□□□ -0.89
MDC1-203ENST00000417033 NEDD1Q8NHV4 660 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 ESR2Q92731 530 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 KLRG1Q96E93 195 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 TTC14Q96N46 770 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 ZNF112Q9UJU3 913 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 SNCAIPQ9Y6H5 919 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 PASKQ96RG2 1323 aa9.52□□□□□ -0.89
MDC1-203ENST00000417033 PLIN4Q96Q06 1357 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 SH2B2O14492 632 aaPredicted RBP9.51□□□□□ -0.89
MDC1-203ENST00000417033 TSPY3P0CV98 308 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 TSPY8P0CW00 308 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 TRDNQ13061 729 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 TOB2Q14106 344 aaPredicted RBP9.51□□□□□ -0.89
MDC1-203ENST00000417033 VGLL4Q14135 290 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 SEC23AQ15436 765 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 RCSD1Q6JBY9 416 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 RUFY3Q7L099 469 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 DHX32Q7L7V1 743 aaKnown RBP9.51□□□□□ -0.89
MDC1-203ENST00000417033 SIAH1Q8IUQ4 282 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 SMC1BQ8NDV3 1235 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 RBM46Q8TBY0 533 aaKnown RBP9.51□□□□□ -0.89
MDC1-203ENST00000417033 CHMP4CQ96CF2 233 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 CEP95Q96GE4 821 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 MFRPQ9BY79 579 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 TM6SF1Q9BZW5 370 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 KRT23Q9C075 422 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 CNNM2Q9H8M5 875 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 GBA2Q9HCG7 927 aaPredicted RBP9.51□□□□□ -0.89
MDC1-203ENST00000417033 TNKSO95271 1327 aa9.51□□□□□ -0.89
MDC1-203ENST00000417033 MYH8P13535 1937 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 A0A1W2PRG0 241 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 IFIT3O14879 490 aaKnown RBP9.5□□□□□ -0.89
MDC1-203ENST00000417033 DTNBO60941 627 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 TOMM70O94826 608 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 LARGE1O95461 756 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 PCP11498 1178 aaKnown RBP9.5□□□□□ -0.89
MDC1-203ENST00000417033 PSMA5P28066 241 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 MCM5P33992 734 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 NF2P35240 595 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 NEK4P51957 841 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 AK2P54819 239 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 DGKZQ13574 1117 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 RAB3GAP1Q15042 981 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 RABEP1Q15276 862 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 TMEM67Q5HYA8 995 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 NOL9Q5SY16 702 aaKnown RBP9.5□□□□□ -0.89
MDC1-203ENST00000417033 Q6ZUG5 572 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 SCYL3Q8IZE3 742 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 LRRC47Q8N1G4 583 aaKnown RBP9.5□□□□□ -0.89
MDC1-203ENST00000417033 ENAHQ8N8S7 591 aaPredicted RBP9.5□□□□□ -0.89
MDC1-203ENST00000417033 ACER1Q8TDN7 264 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 IGDCC4Q8TDY8 1250 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 CCDC17Q96LX7 622 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 ZSCAN10Q96SZ4 725 aaPredicted RBP9.5□□□□□ -0.89
MDC1-203ENST00000417033 MYL10Q9BUA6 226 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 ELP3Q9H9T3 547 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 LY9Q9HBG7 655 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 PDRG1Q9NUG6 133 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 CYP46A1Q9Y6A2 500 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 DOCK1Q14185 1865 aa9.5□□□□□ -0.89
MDC1-203ENST00000417033 ATAD5Q96QE3 1844 aa9.49□□□□□ -0.89
MDC1-203ENST00000417033 PPP1R12BO60237 982 aaPredicted RBP9.49□□□□□ -0.89
MDC1-203ENST00000417033 CTNND1O60716 968 aaKnown RBP9.49□□□□□ -0.89
MDC1-203ENST00000417033 EEF2P13639 858 aaKnown RBP9.49□□□□□ -0.89
MDC1-203ENST00000417033 PTPRAP18433 802 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms