RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 APPL2Q8NEU8 664 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 EPS8L3Q8TE67 593 aaKnown RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 HDAC2Q92769 488 aaKnown RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 MAP3K14Q99558 947 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 TTC1Q99614 292 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 USB1Q9BQ65 265 aaKnown RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 OCSTAMPQ9BR26 566 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 ESYT1Q9BSJ8 1104 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 SPATA9Q9BWV2 254 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 LSM14BQ9BX40 385 aaKnown RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 BCO2Q9BYV7 579 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 BCL2L12Q9HB09 334 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 DDX21Q9NR30 783 aaKnown RBP eCLIP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 TRMT13Q9NUP7 481 aaKnown RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 TMEM63CQ9P1W3 806 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 XPO7Q9UIA9 1087 aaKnown RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 GIT1Q9Y2X7 761 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 HCN4Q9Y3Q4 1203 aa3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 MAGED1Q9Y5V3 778 aaPredicted RBP3.67□□□□□ -1.82
CTDSPL-203ENST00000416688 A0A0G2JS52 829 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 GABRDO14764 452 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 ZEB2O60315 1214 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 MAFKO60675 156 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 GADD45BO75293 160 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 FAM153BP0C7A2 387 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 GYS1P13807 737 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 ZKSCAN1P17029 563 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 CAPN3P20807 821 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 ADD2P35612 726 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 KRT20P35900 424 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 RAD52P43351 418 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 STT3AP46977 705 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 PLA2G4AP47712 749 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 ZNF132P52740 706 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 IRX3P78415 501 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 HMGN5P82970 282 aaKnown RBP3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 PPFIA1Q13136 1202 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 PTPN14Q15678 1187 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 ZKSCAN8Q15776 578 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 C11orf91Q3C1V1 193 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 DNAJC21Q5F1R6 531 aaKnown RBP3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 DUSP27Q5VZP5 1158 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 HGSNATQ68CP4 663 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 FAM180BQ6P0A1 224 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 NBPF10Q6P3W6 841 aaKnown RBP3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 PI16Q6UXB8 463 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 LDHAL6AQ6ZMR3 332 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 OTOP3Q7RTS5 596 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 STRA8Q7Z7C7 330 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 COLGALT2Q8IYK4 626 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 C7orf31Q8N865 590 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 GOLM1Q8NBJ4 401 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 FLCNQ8NFG4 579 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 PARD3BQ8TEW8 1205 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 ZFPM2Q8WW38 1151 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 DDX1Q92499 740 aaKnown RBP3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 N4BP2L2Q92802 583 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 NELL1Q92832 810 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 USP7Q93009 1102 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 FERMT2Q96AC1 680 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 AIFM3Q96NN9 605 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 KCNK17Q96T54 332 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 EIF2AK1Q9BQI3 630 aaKnown RBP3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 MENTQ9BUN1 341 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 CARD10Q9BWT7 1032 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 TSPAN10Q9H1Z9 355 aaPredicted RBP3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 EPN3Q9H201 632 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 DBNDD1Q9H9R9 158 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 ATP6V0A4Q9HBG4 840 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 NCOA5Q9HCD5 579 aaKnown RBP3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 C1orf112Q9NSG2 853 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 SAGE1Q9NXZ1 904 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 NKIRAS2Q9NYR9 191 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 SAP30BPQ9UHR5 308 aaKnown RBP3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 PPM1HQ9ULR3 514 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 VPS9D1Q9Y2B5 631 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 LRCH1Q9Y2L9 728 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 TNKSO95271 1327 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 ERBB4Q15303 1308 aa3.66□□□□□ -1.82
CTDSPL-203ENST00000416688 A0A1W2PRU2 124 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 TRIM64A6NGJ6 449 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 TRIM64BA6NI03 449 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 C19orf81C9J6K1 198 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 BHMG1C9JSJ3 638 aaPredicted RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 PES1O00541 588 aaKnown RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 TOR1BO14657 336 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 CFHP08603 1231 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 CCDC159P0C7I6 412 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 PF4V1P10720 104 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 ATF7P17544 494 aaPredicted RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 GRK2P25098 689 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 MCM4P33991 863 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 HOXD12P35452 270 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 RECQLP46063 649 aaPredicted RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 NEK4P51957 841 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 TPD52P55327 224 aaPredicted RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 PSMA6P60900 246 aaKnown RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 TMPRSS15P98073 1019 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 LMNB2Q03252 620 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 FAPQ12884 760 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms