RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 RUFY3Q7L099 469 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 TBC1D10CQ8IV04 446 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 NKX2-3Q8TAU0 364 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 BRI3BPQ8WY22 251 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 CYP46A1Q9Y6A2 500 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 ZHX2Q9Y6X8 837 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 ZMYM6O95789 1325 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 PTPRAP18433 802 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 GNAT2P19087 354 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 RPS6KB1P23443 525 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 AK2P54819 239 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 MAP3K10Q02779 954 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 PABPC4Q13310 644 aaKnown RBP eCLIP10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 IMMTQ16891 758 aaKnown RBP10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 GADL1Q6ZQY3 521 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 ANKRD23Q86SG2 305 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 NEK1Q96PY6 1258 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 GINM1Q9NU53 330 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 PDRG1Q9NUG6 133 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 KCNH4Q9UQ05 1017 aa10.89□□□□□ -0.67
CHRNA1-206ENST00000416004 PHF20L1A8MW92 1017 aa10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 POLR3DP05423 398 aaPredicted RBP10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 PSMA5P28066 241 aa10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 KRT32Q14532 448 aa10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 FBXO46Q6PJ61 603 aaPredicted RBP10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 BLOC1S2Q6QNY1 142 aa10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 SH3BP5LQ7L8J4 393 aa10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 PARK7Q99497 189 aaKnown RBP10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 PTPN18Q99952 460 aa10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 NAPBQ9H115 298 aa10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 FOXD4L1Q9NU39 408 aa10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 PNMA3Q9UL41 463 aa10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 TRIM17Q9Y577 477 aa10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 TACC3Q9Y6A5 838 aa10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 NAV1Q8NEY1 1877 aa10.88□□□□□ -0.67
CHRNA1-206ENST00000416004 BTBD19C9JJ37 291 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 PDHXO00330 501 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 ZNF213O14771 459 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 ASNSP08243 561 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 TDO2P48775 406 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 EVX2Q03828 476 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 TMX3Q96JJ7 454 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 EFCC1Q9HA90 598 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 INCENPQ9NQS7 918 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 SAP30BPQ9UHR5 308 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 CYP2D7A0A087X1C5 515 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 TRIM75PA6NK02 468 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 USP17L5A8MUK1 530 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 TLR2O60603 784 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 CAP2P40123 477 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 CTDSPL2Q05D32 466 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 NACAP1Q9BZK3 213 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 SLKQ9H2G2 1235 aaPredicted RBP10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 CABP5Q9NP86 173 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 TMOD4Q9NZQ9 345 aa10.87□□□□□ -0.67
CHRNA1-206ENST00000416004 LARGE1O95461 756 aa10.86□□□□□ -0.67
CHRNA1-206ENST00000416004 GNRH1P01148 92 aa10.86□□□□□ -0.67
CHRNA1-206ENST00000416004 HOXD10P28358 340 aa10.86□□□□□ -0.67
CHRNA1-206ENST00000416004 TOB2Q14106 344 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-206ENST00000416004 CHST3Q7LGC8 479 aa10.86□□□□□ -0.67
CHRNA1-206ENST00000416004 SMCR8Q8TEV9 937 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-206ENST00000416004 LRRC2Q9BYS8 371 aa10.86□□□□□ -0.67
CHRNA1-206ENST00000416004 DCP1AQ9NPI6 582 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-206ENST00000416004 SERPINB13Q9UIV8 391 aa10.86□□□□□ -0.67
CHRNA1-206ENST00000416004 AFG3L2Q9Y4W6 797 aa10.86□□□□□ -0.67
CHRNA1-206ENST00000416004 MYH8P13535 1937 aa10.86□□□□□ -0.67
CHRNA1-206ENST00000416004 NEDD4P46934 1319 aa10.86□□□□□ -0.67
CHRNA1-206ENST00000416004 A0A0G2JLL6 359 aaPredicted RBP10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 FAM196BA6NMK8 535 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 CYP2D6P10635 497 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 MCM2P49736 904 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 EXOSC10Q01780 885 aaKnown RBP10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 PRRT2Q7Z6L0 340 aaPredicted RBP10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 MB21D2Q8IYB1 491 aaPredicted RBP10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 STK11IPQ8N1F8 1099 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 PROCA1Q8NCQ7 364 aaPredicted RBP10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 ZNF280CQ8ND82 737 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 CD99L2Q8TCZ2 262 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 MCM9Q9NXL9 1143 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 TAOK2Q9UL54 1235 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 BRPF3Q9ULD4 1205 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 SLC45A1Q9Y2W3 748 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 MINDY4BA8MYZ0 360 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 OSBPP22059 807 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 ANTXR2P58335 489 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 PPARAQ07869 468 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 CTR9Q6PD62 1173 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 DHX32Q7L7V1 743 aaKnown RBP10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 NBPF11Q86T75 865 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 EHD4Q9H223 541 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 ALDH8A1Q9H2A2 487 aaPredicted RBP10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 R3HDMLQ9H3Y0 253 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 GPHNQ9NQX3 736 aaPredicted RBP10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 ATP8A2Q9NTI2 1148 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 PHIPQ8WWQ0 1821 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 PTPRFP10586 1907 aa10.85□□□□□ -0.67
CHRNA1-206ENST00000416004 C19orf81C9J6K1 198 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 USP17L12C9JPN9 530 aa10.84□□□□□ -0.67
CHRNA1-206ENST00000416004 USP17L21D6R901 530 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms