RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 EIF6P56537 245 aaKnown RBP14.39□□□□□ -0.11
SCN1B-202ENST00000415950 TNNC1P63316 161 aa14.39□□□□□ -0.11
SCN1B-202ENST00000415950 DZIP3Q86Y13 1208 aaKnown RBP14.39□□□□□ -0.11
SCN1B-202ENST00000415950 CEP83Q9Y592 693 aa14.39□□□□□ -0.11
SCN1B-202ENST00000415950 MAST3O60307 1309 aa14.39□□□□□ -0.11
SCN1B-202ENST00000415950 CALML3P27482 149 aa14.39□□□□□ -0.11
SCN1B-202ENST00000415950 CXCR5P32302 372 aa14.39□□□□□ -0.11
SCN1B-202ENST00000415950 C2CD5Q86YS7 1000 aa14.39□□□□□ -0.11
SCN1B-202ENST00000415950 DNAJC10Q8IXB1 793 aa14.39□□□□□ -0.11
SCN1B-202ENST00000415950 SMC6Q96SB8 1091 aa14.39□□□□□ -0.11
SCN1B-202ENST00000415950 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.39□□□□□ -0.11
SCN1B-202ENST00000415950 ATP7AQ04656 1500 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 RBL2Q08999 1139 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 PPP1R7Q15435 360 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 LMBR1Q8WVP7 490 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 PPP1R12CQ9BZL4 782 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 RRP15Q9Y3B9 282 aaKnown RBP14.38□□□□□ -0.11
SCN1B-202ENST00000415950 TUBBP07437 444 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 POLA2Q14181 598 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 NCAPH2Q6IBW4 605 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 PLA2G4DQ86XP0 818 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 C6orf50Q9HD87 102 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 ZBTB21Q9ULJ3 1066 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 HS2ST1Q7LGA3 356 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 PUS7LQ9H0K6 701 aaKnown RBP14.38□□□□□ -0.11
SCN1B-202ENST00000415950 ADAM21Q9UKJ8 722 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 BICDL2A1A5D9 508 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 M0R2C6 588 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 BUB1O43683 1085 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 GNGT1P63211 74 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 KIF23Q02241 960 aaPredicted RBP14.38□□□□□ -0.11
SCN1B-202ENST00000415950 CALCOCO2Q13137 446 aa14.38□□□□□ -0.11
SCN1B-202ENST00000415950 TEX13AQ9BXU3 409 aaPredicted RBP14.38□□□□□ -0.11
SCN1B-202ENST00000415950 STX10O60499 249 aa14.37□□□□□ -0.11
SCN1B-202ENST00000415950 PTPN12Q05209 780 aaKnown RBP14.37□□□□□ -0.11
SCN1B-202ENST00000415950 BRD3Q15059 726 aa14.37□□□□□ -0.11
SCN1B-202ENST00000415950 SECISBP2LQ93073 1101 aaKnown RBP14.37□□□□□ -0.11
SCN1B-202ENST00000415950 FAM212AQ96EL1 285 aa14.37□□□□□ -0.11
SCN1B-202ENST00000415950 CSRNP2Q9H175 543 aa14.37□□□□□ -0.11
SCN1B-202ENST00000415950 SAMD9LQ8IVG5 1584 aa14.37□□□□□ -0.11
SCN1B-202ENST00000415950 OR8K1Q8NGG5 319 aa14.37□□□□□ -0.11
SCN1B-202ENST00000415950 RABGGTAQ92696 567 aa14.37□□□□□ -0.11
SCN1B-202ENST00000415950 CDC23Q9UJX2 597 aa14.37□□□□□ -0.11
SCN1B-202ENST00000415950 FOXN1O15353 648 aa14.37□□□□□ -0.11
SCN1B-202ENST00000415950 CYP27A1Q02318 531 aa14.37□□□□□ -0.11
SCN1B-202ENST00000415950 RRAGAQ7L523 313 aa14.37□□□□□ -0.11
SCN1B-202ENST00000415950 DPF2Q92785 391 aa14.37□□□□□ -0.11
SCN1B-202ENST00000415950 COPRSQ9NQ92 184 aa14.37□□□□□ -0.11
SCN1B-202ENST00000415950 RPAP1Q9BWH6 1393 aaPredicted RBP14.36□□□□□ -0.11
SCN1B-202ENST00000415950 SP4Q02446 784 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 APOA5Q6Q788 366 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 TOGARAM2Q6ZUX3 1019 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 SRGAP1Q7Z6B7 1085 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 NELFCDQ8IXH7 590 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 ZNF654Q8IZM8 581 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 EHMT1Q9H9B1 1298 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 MTRF1LQ9UGC7 380 aaKnown RBP14.36□□□□□ -0.11
SCN1B-202ENST00000415950 SAP30BPQ9UHR5 308 aaKnown RBP14.36□□□□□ -0.11
SCN1B-202ENST00000415950 CAPN7Q9Y6W3 813 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 A0A1W2PQ27 194 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 A0A1W2PQ64 194 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 A0A1W2PQD8 194 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 ATP2A1O14983 1001 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 PPM1EQ8WY54 764 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 POLD4Q9HCU8 107 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 ABCB6Q9NP58 842 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 EPN1Q9Y6I3 576 aaPredicted RBP14.36□□□□□ -0.11
SCN1B-202ENST00000415950 TUBB4BP68371 445 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 MTF1Q14872 753 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 UAP1Q16222 522 aaPredicted RBP14.36□□□□□ -0.11
SCN1B-202ENST00000415950 UHMK1Q8TAS1 419 aaKnown RBP14.36□□□□□ -0.11
SCN1B-202ENST00000415950 EPSTI1Q96J88 318 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 BABAM1Q9NWV8 329 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 MYOM2P54296 1465 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 SETD1BQ9UPS6 1966 aaKnown RBP14.36□□□□□ -0.11
SCN1B-202ENST00000415950 ADGBQ8N7X0 1667 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 CFAP74Q9C0B2 1584 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 SMARCC2Q8TAQ2 1214 aa14.36□□□□□ -0.11
SCN1B-202ENST00000415950 KCNJ18B7U540 433 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 PHKA1P46020 1223 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 PTGDRQ13258 359 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 KCNJ12Q14500 433 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 ARMCX5Q6P1M9 558 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 AATFQ9NY61 560 aaKnown RBP eCLIP14.35□□□□□ -0.11
SCN1B-202ENST00000415950 STIM2Q9P246 746 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 CEP104O60308 925 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 FAM13AO94988 1023 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 PDE6AP16499 860 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 FERP16591 822 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 PRPHP41219 470 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 ADAT2Q7Z6V5 191 aaKnown RBP14.35□□□□□ -0.11
SCN1B-202ENST00000415950 RASGRP4Q8TDF6 673 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 CABS1Q96KC9 395 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 TSNARE1Q96NA8 513 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 ADCY10Q96PN6 1610 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 SYMPKQ92797 1274 aaKnown RBP14.35□□□□□ -0.11
SCN1B-202ENST00000415950 IFIH1Q9BYX4 1025 aaKnown RBP14.35□□□□□ -0.11
SCN1B-202ENST00000415950 STMN4Q9H169 189 aaPredicted RBP14.35□□□□□ -0.11
SCN1B-202ENST00000415950 TFCP2L1Q9NZI6 479 aa14.35□□□□□ -0.11
SCN1B-202ENST00000415950 PKD2L1Q9P0L9 805 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms